EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMEG00000015598 (Gene tree)
Gene ID: 106908676
Gene Symbol: exosc1
Alias: -
Full Name: exosome component 1
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Minus strand
Length: 5941 bases
Position: chrKQ553855.1:91869-97809
Accession: 106908676
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000029669	EXOSC1	PF10447.9	1.5e-14	1	1
ENSPMEP00000013277	EXOSC1	PF10447.9	2.5e-12	1	1
ENSPMEP00000013277	ECR1_N	PF14382.6	2.3e-09	1	1
ENSPMEP00000029669	ECR1_N	PF14382.6	2.9e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000020932	-	735	XM_014974832	ENSPMEP00000029669	204 (aa)	XP_014830318	UPI000443B99A
ENSPMET00000020938	-	540	-	ENSPMEP00000013277	179 (aa)	-	-

Gene Model

Click here to download ENSPMEG00000015598's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000015598's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000015598	exosc1	94	76.440	ENSG00000171311	EXOSC1	98	76.440	Homo_sapiens
ENSPMEG00000015598	exosc1	95	89.175	ENSAPOG00000007822	exosc1	100	89.175	Acanthochromis_polyacanthus
ENSPMEG00000015598	exosc1	94	76.440	ENSAMEG00000000129	EXOSC1	98	76.440	Ailuropoda_melanoleuca
ENSPMEG00000015598	exosc1	100	81.863	ENSACIG00000018956	exosc1	100	81.863	Amphilophus_citrinellus
ENSPMEG00000015598	exosc1	95	88.144	ENSAOCG00000010699	exosc1	100	88.144	Amphiprion_ocellaris
ENSPMEG00000015598	exosc1	88	78.333	ENSAPEG00000012690	exosc1	97	78.333	Amphiprion_percula
ENSPMEG00000015598	exosc1	95	88.144	ENSATEG00000018683	exosc1	100	88.144	Anabas_testudineus
ENSPMEG00000015598	exosc1	95	70.619	ENSACAG00000002101	EXOSC1	99	70.619	Anolis_carolinensis
ENSPMEG00000015598	exosc1	94	76.440	ENSANAG00000034669	EXOSC1	98	76.440	Aotus_nancymaae
ENSPMEG00000015598	exosc1	95	88.144	ENSACLG00000021243	exosc1	100	88.144	Astatotilapia_calliptera
ENSPMEG00000015598	exosc1	95	85.567	ENSAMXG00000011116	exosc1	100	85.567	Astyanax_mexicanus
ENSPMEG00000015598	exosc1	94	76.042	ENSBTAG00000012699	EXOSC1	98	76.042	Bos_taurus
ENSPMEG00000015598	exosc1	89	35.602	WBGene00012966	exos-1	92	35.602	Caenorhabditis_elegans
ENSPMEG00000015598	exosc1	94	75.916	ENSCJAG00000016586	EXOSC1	98	75.916	Callithrix_jacchus
ENSPMEG00000015598	exosc1	94	75.521	ENSCAFG00000009068	EXOSC1	93	75.521	Canis_familiaris
ENSPMEG00000015598	exosc1	94	75.521	ENSCAFG00020006002	EXOSC1	93	75.521	Canis_lupus_dingo
ENSPMEG00000015598	exosc1	94	76.042	ENSCHIG00000015253	EXOSC1	98	76.042	Capra_hircus
ENSPMEG00000015598	exosc1	94	75.393	ENSTSYG00000000760	EXOSC1	98	75.393	Carlito_syrichta
ENSPMEG00000015598	exosc1	94	75.521	ENSCPOG00000001173	EXOSC1	98	75.521	Cavia_porcellus
ENSPMEG00000015598	exosc1	93	42.169	ENSCCAG00000023986	EXOSC1	97	42.169	Cebus_capucinus
ENSPMEG00000015598	exosc1	94	76.440	ENSCATG00000034114	EXOSC1	98	76.440	Cercocebus_atys
ENSPMEG00000015598	exosc1	94	75.916	ENSCLAG00000002463	EXOSC1	98	75.916	Chinchilla_lanigera
ENSPMEG00000015598	exosc1	94	75.916	ENSCSAG00000005870	EXOSC1	98	75.916	Chlorocebus_sabaeus
ENSPMEG00000015598	exosc1	90	64.130	ENSCHOG00000006477	EXOSC1	98	64.130	Choloepus_hoffmanni
ENSPMEG00000015598	exosc1	52	64.486	ENSCPBG00000011949	EXOSC1	88	64.486	Chrysemys_picta_bellii
ENSPMEG00000015598	exosc1	92	50.532	ENSCING00000022734	-	90	50.532	Ciona_intestinalis
ENSPMEG00000015598	exosc1	94	54.404	ENSCSAVG00000010865	-	98	54.404	Ciona_savignyi
ENSPMEG00000015598	exosc1	94	76.440	ENSCANG00000034159	EXOSC1	98	76.440	Colobus_angolensis_palliatus
ENSPMEG00000015598	exosc1	94	74.869	ENSCGRG00001000335	Exosc1	98	74.869	Cricetulus_griseus_chok1gshd
ENSPMEG00000015598	exosc1	94	74.869	ENSCGRG00000011602	Exosc1	98	74.869	Cricetulus_griseus_crigri
ENSPMEG00000015598	exosc1	97	85.549	ENSCSEG00000007895	exosc1	99	85.549	Cynoglossus_semilaevis
ENSPMEG00000015598	exosc1	95	96.392	ENSCVAG00000016748	exosc1	100	96.392	Cyprinodon_variegatus
ENSPMEG00000015598	exosc1	95	85.567	ENSDARG00000059841	exosc1	100	85.567	Danio_rerio
ENSPMEG00000015598	exosc1	71	73.793	ENSDNOG00000007983	EXOSC1	98	73.793	Dasypus_novemcinctus
ENSPMEG00000015598	exosc1	94	75.000	ENSDORG00000016528	Exosc1	98	75.000	Dipodomys_ordii
ENSPMEG00000015598	exosc1	95	46.734	FBgn0032346	Csl4	97	46.734	Drosophila_melanogaster
ENSPMEG00000015598	exosc1	94	74.346	ENSETEG00000002469	-	98	74.346	Echinops_telfairi
ENSPMEG00000015598	exosc1	93	61.979	ENSEBUG00000008164	exosc1	96	61.979	Eptatretus_burgeri
ENSPMEG00000015598	exosc1	94	67.539	ENSEASG00005008684	EXOSC1	98	68.478	Equus_asinus_asinus
ENSPMEG00000015598	exosc1	57	54.310	ENSECAG00000010621	EXOSC1	69	55.046	Equus_caballus
ENSPMEG00000015598	exosc1	94	75.393	ENSEEUG00000005647	EXOSC1	98	75.393	Erinaceus_europaeus
ENSPMEG00000015598	exosc1	94	84.264	ENSELUG00000017369	exosc1	100	81.395	Esox_lucius
ENSPMEG00000015598	exosc1	94	76.440	ENSFCAG00000040563	EXOSC1	98	74.251	Felis_catus
ENSPMEG00000015598	exosc1	94	73.822	ENSFALG00000008450	EXOSC1	98	73.822	Ficedula_albicollis
ENSPMEG00000015598	exosc1	94	76.440	ENSFDAG00000000846	EXOSC1	98	76.440	Fukomys_damarensis
ENSPMEG00000015598	exosc1	95	95.361	ENSFHEG00000009154	exosc1	100	95.361	Fundulus_heteroclitus
ENSPMEG00000015598	exosc1	95	86.082	ENSGMOG00000008993	exosc1	100	86.082	Gadus_morhua
ENSPMEG00000015598	exosc1	93	72.289	ENSGALG00000039917	EXOSC1	99	79.310	Gallus_gallus
ENSPMEG00000015598	exosc1	100	98.039	ENSGAFG00000010265	exosc1	100	98.039	Gambusia_affinis
ENSPMEG00000015598	exosc1	95	85.052	ENSGACG00000018936	exosc1	100	85.052	Gasterosteus_aculeatus
ENSPMEG00000015598	exosc1	94	72.775	ENSGAGG00000019192	EXOSC1	98	72.775	Gopherus_agassizii
ENSPMEG00000015598	exosc1	93	73.653	ENSGGOG00000003099	EXOSC1	98	73.653	Gorilla_gorilla
ENSPMEG00000015598	exosc1	95	88.144	ENSHBUG00000017857	exosc1	100	88.144	Haplochromis_burtoni
ENSPMEG00000015598	exosc1	94	75.916	ENSHGLG00000016927	EXOSC1	98	75.916	Heterocephalus_glaber_female
ENSPMEG00000015598	exosc1	94	75.916	ENSHGLG00100012208	EXOSC1	98	75.916	Heterocephalus_glaber_male
ENSPMEG00000015598	exosc1	95	86.598	ENSHCOG00000019882	exosc1	100	86.598	Hippocampus_comes
ENSPMEG00000015598	exosc1	95	84.021	ENSIPUG00000007685	exosc1	100	84.021	Ictalurus_punctatus
ENSPMEG00000015598	exosc1	58	61.345	ENSSTOG00000029860	-	91	61.345	Ictidomys_tridecemlineatus
ENSPMEG00000015598	exosc1	94	75.000	ENSSTOG00000006615	EXOSC1	98	75.000	Ictidomys_tridecemlineatus
ENSPMEG00000015598	exosc1	94	76.042	ENSJJAG00000013311	Exosc1	98	76.042	Jaculus_jaculus
ENSPMEG00000015598	exosc1	98	86.500	ENSKMAG00000001202	exosc1	84	86.500	Kryptolebias_marmoratus
ENSPMEG00000015598	exosc1	95	88.144	ENSLBEG00000011448	exosc1	100	88.144	Labrus_bergylta
ENSPMEG00000015598	exosc1	95	62.000	ENSLOCG00000003776	exosc1	100	62.000	Lepisosteus_oculatus
ENSPMEG00000015598	exosc1	94	75.916	ENSLAFG00000015983	EXOSC1	98	75.916	Loxodonta_africana
ENSPMEG00000015598	exosc1	94	76.440	ENSMFAG00000001493	EXOSC1	98	76.440	Macaca_fascicularis
ENSPMEG00000015598	exosc1	94	76.440	ENSMMUG00000020028	EXOSC1	98	74.699	Macaca_mulatta
ENSPMEG00000015598	exosc1	94	76.440	ENSMNEG00000029816	EXOSC1	98	76.440	Macaca_nemestrina
ENSPMEG00000015598	exosc1	94	71.728	ENSMLEG00000027643	EXOSC1	98	71.728	Mandrillus_leucophaeus
ENSPMEG00000015598	exosc1	95	89.691	ENSMAMG00000012200	exosc1	100	89.691	Mastacembelus_armatus
ENSPMEG00000015598	exosc1	95	88.144	ENSMZEG00005007042	exosc1	100	88.144	Maylandia_zebra
ENSPMEG00000015598	exosc1	93	74.096	ENSMAUG00000020462	-	98	74.096	Mesocricetus_auratus
ENSPMEG00000015598	exosc1	94	75.521	ENSMICG00000007664	EXOSC1	98	74.251	Microcebus_murinus
ENSPMEG00000015598	exosc1	93	70.000	ENSMOCG00000017124	-	97	70.000	Microtus_ochrogaster
ENSPMEG00000015598	exosc1	94	74.869	ENSMOCG00000006004	-	98	74.869	Microtus_ochrogaster
ENSPMEG00000015598	exosc1	95	67.010	ENSMMOG00000021403	exosc1	100	67.010	Mola_mola
ENSPMEG00000015598	exosc1	94	75.648	ENSMODG00000004213	EXOSC1	98	75.648	Monodelphis_domestica
ENSPMEG00000015598	exosc1	91	89.730	ENSMALG00000007061	exosc1	93	89.730	Monopterus_albus
ENSPMEG00000015598	exosc1	94	74.346	MGP_CAROLIEiJ_G0022959	Exosc1	98	74.346	Mus_caroli
ENSPMEG00000015598	exosc1	94	74.869	ENSMUSG00000034321	Exosc1	98	74.869	Mus_musculus
ENSPMEG00000015598	exosc1	94	74.869	MGP_PahariEiJ_G0014449	Exosc1	98	74.869	Mus_pahari
ENSPMEG00000015598	exosc1	94	74.346	MGP_SPRETEiJ_G0023880	Exosc1	98	74.346	Mus_spretus
ENSPMEG00000015598	exosc1	94	76.440	ENSMPUG00000017044	EXOSC1	98	76.440	Mustela_putorius_furo
ENSPMEG00000015598	exosc1	94	75.916	ENSMLUG00000009228	EXOSC1	98	75.916	Myotis_lucifugus
ENSPMEG00000015598	exosc1	94	73.822	ENSNGAG00000022033	Exosc1	98	73.822	Nannospalax_galili
ENSPMEG00000015598	exosc1	96	69.231	ENSNBRG00000024007	exosc1	100	69.231	Neolamprologus_brichardi
ENSPMEG00000015598	exosc1	94	75.916	ENSNLEG00000013872	EXOSC1	98	75.916	Nomascus_leucogenys
ENSPMEG00000015598	exosc1	55	68.750	ENSMEUG00000002246	EXOSC1	97	68.750	Notamacropus_eugenii
ENSPMEG00000015598	exosc1	94	74.479	ENSOPRG00000005065	EXOSC1	98	74.479	Ochotona_princeps
ENSPMEG00000015598	exosc1	94	76.440	ENSODEG00000016709	EXOSC1	98	76.440	Octodon_degus
ENSPMEG00000015598	exosc1	96	87.692	ENSONIG00000017683	exosc1	100	87.692	Oreochromis_niloticus
ENSPMEG00000015598	exosc1	64	85.965	ENSOANG00000006563	EXOSC1	98	82.927	Ornithorhynchus_anatinus
ENSPMEG00000015598	exosc1	94	69.792	ENSOCUG00000026461	-	98	69.792	Oryctolagus_cuniculus
ENSPMEG00000015598	exosc1	94	74.479	ENSOCUG00000011898	-	98	74.479	Oryctolagus_cuniculus
ENSPMEG00000015598	exosc1	95	86.154	ENSORLG00000011595	exosc1	100	86.154	Oryzias_latipes
ENSPMEG00000015598	exosc1	95	86.154	ENSORLG00020005831	exosc1	100	86.154	Oryzias_latipes_hni
ENSPMEG00000015598	exosc1	95	86.154	ENSORLG00015004317	exosc1	100	86.154	Oryzias_latipes_hsok
ENSPMEG00000015598	exosc1	96	73.846	ENSOMEG00000013907	exosc1	100	73.846	Oryzias_melastigma
ENSPMEG00000015598	exosc1	94	75.393	ENSOGAG00000016259	EXOSC1	98	75.393	Otolemur_garnettii
ENSPMEG00000015598	exosc1	94	75.521	ENSOARG00000010136	EXOSC1	98	75.521	Ovis_aries
ENSPMEG00000015598	exosc1	94	71.134	ENSPPAG00000039842	EXOSC1	98	71.134	Pan_paniscus
ENSPMEG00000015598	exosc1	94	76.440	ENSPPRG00000023366	EXOSC1	98	76.440	Panthera_pardus
ENSPMEG00000015598	exosc1	94	76.440	ENSPTIG00000017701	EXOSC1	98	76.440	Panthera_tigris_altaica
ENSPMEG00000015598	exosc1	94	76.440	ENSPTRG00000002808	EXOSC1	98	76.440	Pan_troglodytes
ENSPMEG00000015598	exosc1	94	76.440	ENSPANG00000021324	EXOSC1	98	76.440	Papio_anubis
ENSPMEG00000015598	exosc1	95	86.082	ENSPKIG00000016037	exosc1	100	86.082	Paramormyrops_kingsleyae
ENSPMEG00000015598	exosc1	75	71.975	ENSPSIG00000013571	EXOSC1	98	74.380	Pelodiscus_sinensis
ENSPMEG00000015598	exosc1	94	88.166	ENSPMGG00000014002	exosc1	100	88.166	Periophthalmus_magnuspinnatus
ENSPMEG00000015598	exosc1	94	74.869	ENSPEMG00000010710	-	98	74.869	Peromyscus_maniculatus_bairdii
ENSPMEG00000015598	exosc1	91	65.241	ENSPMAG00000000195	exosc1	95	65.241	Petromyzon_marinus
ENSPMEG00000015598	exosc1	94	74.479	ENSPCIG00000002210	EXOSC1	97	74.479	Phascolarctos_cinereus
ENSPMEG00000015598	exosc1	100	100.000	ENSPFOG00000006755	exosc1	100	100.000	Poecilia_formosa
ENSPMEG00000015598	exosc1	95	100.000	ENSPLAG00000005880	exosc1	100	100.000	Poecilia_latipinna
ENSPMEG00000015598	exosc1	100	98.324	ENSPREG00000000405	exosc1	100	98.324	Poecilia_reticulata
ENSPMEG00000015598	exosc1	94	76.042	ENSPPYG00000002531	EXOSC1	98	76.042	Pongo_abelii
ENSPMEG00000015598	exosc1	94	74.869	ENSPCAG00000009135	EXOSC1	98	74.869	Procavia_capensis
ENSPMEG00000015598	exosc1	94	70.312	ENSPCOG00000027539	EXOSC1	98	70.312	Propithecus_coquereli
ENSPMEG00000015598	exosc1	94	75.916	ENSPVAG00000003372	EXOSC1	98	75.916	Pteropus_vampyrus
ENSPMEG00000015598	exosc1	95	88.144	ENSPNYG00000021745	exosc1	100	88.144	Pundamilia_nyererei
ENSPMEG00000015598	exosc1	95	84.536	ENSPNAG00000001944	exosc1	100	84.536	Pygocentrus_nattereri
ENSPMEG00000015598	exosc1	94	74.869	ENSRNOG00000048708	Exosc1	98	74.869	Rattus_norvegicus
ENSPMEG00000015598	exosc1	94	76.440	ENSRBIG00000035618	EXOSC1	98	76.440	Rhinopithecus_bieti
ENSPMEG00000015598	exosc1	94	76.440	ENSRROG00000032589	EXOSC1	98	74.699	Rhinopithecus_roxellana
ENSPMEG00000015598	exosc1	94	76.440	ENSSBOG00000000359	EXOSC1	98	76.440	Saimiri_boliviensis_boliviensis
ENSPMEG00000015598	exosc1	72	82.993	ENSSHAG00000018219	EXOSC1	100	82.993	Sarcophilus_harrisii
ENSPMEG00000015598	exosc1	95	82.474	ENSSFOG00015016289	-	100	82.474	Scleropages_formosus
ENSPMEG00000015598	exosc1	95	84.021	ENSSFOG00015009069	exosc1	100	84.021	Scleropages_formosus
ENSPMEG00000015598	exosc1	95	87.629	ENSSMAG00000003721	exosc1	100	87.629	Scophthalmus_maximus
ENSPMEG00000015598	exosc1	95	87.113	ENSSDUG00000002993	exosc1	100	87.113	Seriola_dumerili
ENSPMEG00000015598	exosc1	95	87.113	ENSSLDG00000025181	exosc1	100	87.113	Seriola_lalandi_dorsalis
ENSPMEG00000015598	exosc1	94	64.398	ENSSARG00000000162	EXOSC1	98	64.398	Sorex_araneus
ENSPMEG00000015598	exosc1	94	70.157	ENSSPUG00000012263	EXOSC1	98	70.157	Sphenodon_punctatus
ENSPMEG00000015598	exosc1	98	80.500	ENSSPAG00000016792	exosc1	86	80.500	Stegastes_partitus
ENSPMEG00000015598	exosc1	94	75.916	ENSSSCG00000010518	EXOSC1	89	75.916	Sus_scrofa
ENSPMEG00000015598	exosc1	94	73.298	ENSTGUG00000009692	EXOSC1	98	73.298	Taeniopygia_guttata
ENSPMEG00000015598	exosc1	93	79.474	ENSTRUG00000007706	exosc1	98	79.474	Takifugu_rubripes
ENSPMEG00000015598	exosc1	96	77.778	ENSTNIG00000014079	exosc1	99	77.778	Tetraodon_nigroviridis
ENSPMEG00000015598	exosc1	94	70.157	ENSTBEG00000006011	EXOSC1	98	70.157	Tupaia_belangeri
ENSPMEG00000015598	exosc1	90	76.630	ENSTTRG00000009887	EXOSC1	100	76.630	Tursiops_truncatus
ENSPMEG00000015598	exosc1	94	59.898	ENSUAMG00000010266	EXOSC1	98	59.898	Ursus_americanus
ENSPMEG00000015598	exosc1	94	60.938	ENSUMAG00000022002	EXOSC1	98	60.938	Ursus_maritimus
ENSPMEG00000015598	exosc1	94	75.916	ENSVVUG00000023192	EXOSC1	62	75.916	Vulpes_vulpes
ENSPMEG00000015598	exosc1	95	72.539	ENSXETG00000003434	exosc1	99	72.539	Xenopus_tropicalis
ENSPMEG00000015598	exosc1	68	100.000	ENSXCOG00000014499	exosc1	93	100.000	Xiphophorus_couchianus
ENSPMEG00000015598	exosc1	100	98.324	ENSXMAG00000023382	exosc1	100	98.324	Xiphophorus_maculatus