EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMEG00000015770 (Gene tree)
Gene ID: 106917479
Gene Symbol: rbm38
Alias: -
Full Name: RNA-binding protein 38-like
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Plus strand
Length: 26609 bases
Position: chrKQ551239.1:275132-301740
Accession: 106917479
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000013458	RRM_1	PF00076.22	4.2e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000021180	-	6221	XM_014986477	ENSPMEP00000013458	254 (aa)	XP_014841963	UPI00072E3327

Gene Model

Click here to download ENSPMEG00000015770's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000015770's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMEG00000015770	rbm38	59	69.231	ENSPMEG00000009382	-	81	61.140
ENSPMEG00000015770	rbm38	98	60.769	ENSPMEG00000020921	-	100	58.268
ENSPMEG00000015770	rbm38	59	69.231	ENSPMEG00000022792	rbm24b	81	61.140
ENSPMEG00000015770	rbm38	72	61.780	ENSPMEG00000021740	rbm24a	82	63.021
ENSPMEG00000015770	rbm38	69	32.323	ENSPMEG00000007025	-	50	36.709

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000015770	rbm38	91	58.120	ENSG00000132819	RBM38	91	83.929	Homo_sapiens
ENSPMEG00000015770	rbm38	100	89.370	ENSAPOG00000003301	rbm38	100	89.370	Acanthochromis_polyacanthus
ENSPMEG00000015770	rbm38	98	60.392	ENSAPOG00000009939	-	100	59.449	Acanthochromis_polyacanthus
ENSPMEG00000015770	rbm38	98	61.024	ENSACIG00000012502	-	100	81.197	Amphilophus_citrinellus
ENSPMEG00000015770	rbm38	100	85.827	ENSACIG00000000010	rbm38	100	85.827	Amphilophus_citrinellus
ENSPMEG00000015770	rbm38	95	60.494	ENSAOCG00000012559	RBM38	98	59.504	Amphiprion_ocellaris
ENSPMEG00000015770	rbm38	100	89.764	ENSAOCG00000013497	-	100	89.764	Amphiprion_ocellaris
ENSPMEG00000015770	rbm38	100	89.764	ENSAPEG00000013137	rbm38	100	89.764	Amphiprion_percula
ENSPMEG00000015770	rbm38	98	59.608	ENSAPEG00000023581	-	100	58.661	Amphiprion_percula
ENSPMEG00000015770	rbm38	98	60.784	ENSATEG00000016710	-	100	58.661	Anabas_testudineus
ENSPMEG00000015770	rbm38	100	83.465	ENSATEG00000016366	rbm38	100	83.465	Anabas_testudineus
ENSPMEG00000015770	rbm38	91	57.692	ENSACAG00000016238	RBM38	89	55.745	Anolis_carolinensis
ENSPMEG00000015770	rbm38	91	57.692	ENSANAG00000031959	RBM38	78	90.426	Aotus_nancymaae
ENSPMEG00000015770	rbm38	98	59.690	ENSACLG00000019514	-	100	57.480	Astatotilapia_calliptera
ENSPMEG00000015770	rbm38	98	58.268	ENSAMXG00000015601	-	100	57.874	Astyanax_mexicanus
ENSPMEG00000015770	rbm38	95	54.545	ENSAMXG00000038120	rbm38	79	61.458	Astyanax_mexicanus
ENSPMEG00000015770	rbm38	91	58.974	ENSBTAG00000008105	RBM38	89	56.118	Bos_taurus
ENSPMEG00000015770	rbm38	59	61.184	WBGene00006321	sup-12	78	71.429	Caenorhabditis_elegans
ENSPMEG00000015770	rbm38	91	57.692	ENSCJAG00000019139	RBM38	78	90.426	Callithrix_jacchus
ENSPMEG00000015770	rbm38	91	57.692	ENSCAFG00020021943	RBM38	89	56.838	Canis_lupus_dingo
ENSPMEG00000015770	rbm38	91	58.547	ENSCHIG00000002609	RBM38	89	55.556	Capra_hircus
ENSPMEG00000015770	rbm38	91	58.547	ENSCPOG00000012781	RBM38	89	56.410	Cavia_porcellus
ENSPMEG00000015770	rbm38	91	57.692	ENSCCAG00000036872	RBM38	78	90.426	Cebus_capucinus
ENSPMEG00000015770	rbm38	91	58.547	ENSCATG00000032133	RBM38	78	90.426	Cercocebus_atys
ENSPMEG00000015770	rbm38	91	58.974	ENSCLAG00000005906	RBM38	78	64.674	Chinchilla_lanigera
ENSPMEG00000015770	rbm38	91	58.547	ENSCSAG00000015503	RBM38	89	55.983	Chlorocebus_sabaeus
ENSPMEG00000015770	rbm38	92	56.540	ENSCPBG00000024059	RBM38	84	62.567	Chrysemys_picta_bellii
ENSPMEG00000015770	rbm38	59	60.625	ENSCING00000025102	-	53	70.732	Ciona_intestinalis
ENSPMEG00000015770	rbm38	91	44.681	ENSCANG00000030105	-	78	42.979	Colobus_angolensis_palliatus
ENSPMEG00000015770	rbm38	72	64.674	ENSCGRG00001012928	Rbm38	89	55.983	Cricetulus_griseus_chok1gshd
ENSPMEG00000015770	rbm38	84	64.789	ENSCSEG00000020943	rbm38	62	67.708	Cynoglossus_semilaevis
ENSPMEG00000015770	rbm38	98	61.417	ENSCSEG00000004701	-	100	59.843	Cynoglossus_semilaevis
ENSPMEG00000015770	rbm38	98	61.961	ENSCVAG00000005472	-	100	59.843	Cyprinodon_variegatus
ENSPMEG00000015770	rbm38	100	92.126	ENSCVAG00000015952	rbm38	100	92.126	Cyprinodon_variegatus
ENSPMEG00000015770	rbm38	98	62.550	ENSDARG00000058818	rbm38	82	68.317	Danio_rerio
ENSPMEG00000015770	rbm38	91	56.466	ENSDNOG00000032004	RBM38	98	55.172	Dasypus_novemcinctus
ENSPMEG00000015770	rbm38	91	57.692	ENSECAG00000007700	RBM38	89	56.838	Equus_caballus
ENSPMEG00000015770	rbm38	91	56.596	ENSEEUG00000013489	RBM38	89	54.468	Erinaceus_europaeus
ENSPMEG00000015770	rbm38	92	67.949	ENSELUG00000000585	-	100	65.385	Esox_lucius
ENSPMEG00000015770	rbm38	98	59.459	ENSELUG00000005849	-	100	58.687	Esox_lucius
ENSPMEG00000015770	rbm38	91	58.120	ENSFCAG00000042916	RBM38	78	89.362	Felis_catus
ENSPMEG00000015770	rbm38	69	68.750	ENSFALG00000010805	RBM38	88	64.571	Ficedula_albicollis
ENSPMEG00000015770	rbm38	100	92.941	ENSFHEG00000017748	rbm38	100	90.551	Fundulus_heteroclitus
ENSPMEG00000015770	rbm38	98	60.000	ENSFHEG00000006160	-	100	59.449	Fundulus_heteroclitus
ENSPMEG00000015770	rbm38	76	66.146	ENSGMOG00000016655	-	97	69.022	Gadus_morhua
ENSPMEG00000015770	rbm38	92	55.932	ENSGALG00000026081	RBM38	84	62.567	Gallus_gallus
ENSPMEG00000015770	rbm38	93	57.500	ENSGACG00000009873	-	100	55.833	Gasterosteus_aculeatus
ENSPMEG00000015770	rbm38	93	74.262	ENSGACG00000015224	rbm38	100	74.262	Gasterosteus_aculeatus
ENSPMEG00000015770	rbm38	92	56.540	ENSGAGG00000001187	RBM38	84	62.567	Gopherus_agassizii
ENSPMEG00000015770	rbm38	98	59.690	ENSHBUG00000011778	-	100	57.480	Haplochromis_burtoni
ENSPMEG00000015770	rbm38	100	86.220	ENSHBUG00000012058	rbm38	100	86.220	Haplochromis_burtoni
ENSPMEG00000015770	rbm38	91	59.402	ENSHGLG00000015077	RBM38	89	57.265	Heterocephalus_glaber_female
ENSPMEG00000015770	rbm38	100	60.784	ENSHCOG00000019040	rbm38	100	60.784	Hippocampus_comes
ENSPMEG00000015770	rbm38	81	64.423	ENSHCOG00000005622	-	57	64.734	Hippocampus_comes
ENSPMEG00000015770	rbm38	98	57.087	ENSIPUG00000019349	-	100	55.512	Ictalurus_punctatus
ENSPMEG00000015770	rbm38	91	72.803	ENSKMAG00000012402	rbm38	99	72.803	Kryptolebias_marmoratus
ENSPMEG00000015770	rbm38	100	84.252	ENSLBEG00000018878	rbm38	100	84.252	Labrus_bergylta
ENSPMEG00000015770	rbm38	98	57.692	ENSLBEG00000016163	RBM38	100	57.480	Labrus_bergylta
ENSPMEG00000015770	rbm38	98	59.524	ENSLOCG00000003456	rbm38	100	56.746	Lepisosteus_oculatus
ENSPMEG00000015770	rbm38	91	58.547	ENSMFAG00000043808	RBM38	78	90.426	Macaca_fascicularis
ENSPMEG00000015770	rbm38	91	58.547	ENSMMUG00000031391	RBM38	78	90.426	Macaca_mulatta
ENSPMEG00000015770	rbm38	91	58.547	ENSMNEG00000034683	RBM38	78	90.426	Macaca_nemestrina
ENSPMEG00000015770	rbm38	100	87.795	ENSMAMG00000024135	rbm38	100	85.827	Mastacembelus_armatus
ENSPMEG00000015770	rbm38	98	62.205	ENSMAMG00000020499	RBM38	100	60.079	Mastacembelus_armatus
ENSPMEG00000015770	rbm38	98	59.690	ENSMZEG00005000849	-	100	57.480	Maylandia_zebra
ENSPMEG00000015770	rbm38	100	86.220	ENSMZEG00005026036	rbm38	100	86.220	Maylandia_zebra
ENSPMEG00000015770	rbm38	72	65.217	ENSMAUG00000021211	Rbm38	89	56.838	Mesocricetus_auratus
ENSPMEG00000015770	rbm38	91	57.265	ENSMICG00000038011	RBM38	98	56.410	Microcebus_murinus
ENSPMEG00000015770	rbm38	72	65.217	ENSMOCG00000008715	Rbm38	89	56.838	Microtus_ochrogaster
ENSPMEG00000015770	rbm38	98	59.608	ENSMMOG00000020051	-	100	58.268	Mola_mola
ENSPMEG00000015770	rbm38	92	55.508	ENSMODG00000016458	RBM38	91	54.237	Monodelphis_domestica
ENSPMEG00000015770	rbm38	100	70.079	ENSMALG00000022327	rbm38	100	67.829	Monopterus_albus
ENSPMEG00000015770	rbm38	76	69.588	ENSMALG00000004680	RBM38	71	68.394	Monopterus_albus
ENSPMEG00000015770	rbm38	91	58.120	MGP_CAROLIEiJ_G0024745	Rbm38	58	86.667	Mus_caroli
ENSPMEG00000015770	rbm38	91	58.120	ENSMUSG00000027510	Rbm38	58	86.667	Mus_musculus
ENSPMEG00000015770	rbm38	91	57.265	MGP_PahariEiJ_G0026186	Rbm38	58	86.667	Mus_pahari
ENSPMEG00000015770	rbm38	91	58.120	MGP_SPRETEiJ_G0025665	Rbm38	58	86.667	Mus_spretus
ENSPMEG00000015770	rbm38	72	65.217	ENSMPUG00000006518	RBM38	89	62.500	Mustela_putorius_furo
ENSPMEG00000015770	rbm38	91	57.692	ENSMLUG00000011140	RBM38	98	54.274	Myotis_lucifugus
ENSPMEG00000015770	rbm38	100	86.614	ENSNBRG00000022685	rbm38	100	86.614	Neolamprologus_brichardi
ENSPMEG00000015770	rbm38	98	59.690	ENSNBRG00000022545	-	100	58.203	Neolamprologus_brichardi
ENSPMEG00000015770	rbm38	91	59.829	ENSODEG00000007980	RBM38	89	56.838	Octodon_degus
ENSPMEG00000015770	rbm38	98	86.345	ENSONIG00000017073	rbm38	100	86.345	Oreochromis_niloticus
ENSPMEG00000015770	rbm38	98	59.533	ENSONIG00000020324	-	100	58.039	Oreochromis_niloticus
ENSPMEG00000015770	rbm38	78	61.111	ENSOANG00000009259	RBM38	69	62.703	Ornithorhynchus_anatinus
ENSPMEG00000015770	rbm38	98	57.198	ENSORLG00000027180	-	100	56.299	Oryzias_latipes
ENSPMEG00000015770	rbm38	100	83.137	ENSORLG00000012154	rbm38	100	78.431	Oryzias_latipes
ENSPMEG00000015770	rbm38	100	83.137	ENSORLG00020017871	rbm38	100	78.431	Oryzias_latipes_hni
ENSPMEG00000015770	rbm38	100	56.705	ENSORLG00020020751	-	100	56.299	Oryzias_latipes_hni
ENSPMEG00000015770	rbm38	98	58.661	ENSORLG00015017040	-	100	57.422	Oryzias_latipes_hsok
ENSPMEG00000015770	rbm38	100	83.137	ENSORLG00015012606	rbm38	100	78.431	Oryzias_latipes_hsok
ENSPMEG00000015770	rbm38	100	83.137	ENSOMEG00000006805	rbm38	100	78.431	Oryzias_melastigma
ENSPMEG00000015770	rbm38	98	58.039	ENSOMEG00000023912	-	100	57.422	Oryzias_melastigma
ENSPMEG00000015770	rbm38	91	58.547	ENSOGAG00000029136	RBM38	88	55.696	Otolemur_garnettii
ENSPMEG00000015770	rbm38	91	58.120	ENSPPRG00000009507	RBM38	78	89.362	Panthera_pardus
ENSPMEG00000015770	rbm38	77	63.265	ENSPTRG00000013661	RBM38	78	90.426	Pan_troglodytes
ENSPMEG00000015770	rbm38	91	58.547	ENSPANG00000020919	-	78	90.426	Papio_anubis
ENSPMEG00000015770	rbm38	95	46.939	ENSPANG00000033127	-	93	44.898	Papio_anubis
ENSPMEG00000015770	rbm38	98	55.642	ENSPKIG00000025417	rbm38	82	62.981	Paramormyrops_kingsleyae
ENSPMEG00000015770	rbm38	98	57.937	ENSPKIG00000018122	-	95	81.982	Paramormyrops_kingsleyae
ENSPMEG00000015770	rbm38	92	58.298	ENSPSIG00000011649	RBM38	77	61.497	Pelodiscus_sinensis
ENSPMEG00000015770	rbm38	98	57.588	ENSPMGG00000017094	-	100	55.686	Periophthalmus_magnuspinnatus
ENSPMEG00000015770	rbm38	100	72.157	ENSPMGG00000011343	rbm38	100	74.118	Periophthalmus_magnuspinnatus
ENSPMEG00000015770	rbm38	92	55.932	ENSPCIG00000013648	RBM38	91	55.085	Phascolarctos_cinereus
ENSPMEG00000015770	rbm38	100	99.606	ENSPFOG00000011658	rbm38	100	99.606	Poecilia_formosa
ENSPMEG00000015770	rbm38	100	99.213	ENSPLAG00000005218	rbm38	100	99.213	Poecilia_latipinna
ENSPMEG00000015770	rbm38	98	60.769	ENSPLAG00000002500	-	100	58.268	Poecilia_latipinna
ENSPMEG00000015770	rbm38	100	99.213	ENSPREG00000007398	rbm38	100	99.213	Poecilia_reticulata
ENSPMEG00000015770	rbm38	91	57.692	ENSPCOG00000026201	RBM38	77	90.426	Propithecus_coquereli
ENSPMEG00000015770	rbm38	72	40.217	ENSPVAG00000006457	RBM38	89	35.043	Pteropus_vampyrus
ENSPMEG00000015770	rbm38	98	59.690	ENSPNYG00000019727	-	100	81.197	Pundamilia_nyererei
ENSPMEG00000015770	rbm38	100	85.827	ENSPNYG00000021373	rbm38	100	85.827	Pundamilia_nyererei
ENSPMEG00000015770	rbm38	94	59.184	ENSPNAG00000010596	rbm38	82	64.532	Pygocentrus_nattereri
ENSPMEG00000015770	rbm38	98	59.055	ENSPNAG00000015123	-	88	82.456	Pygocentrus_nattereri
ENSPMEG00000015770	rbm38	91	58.974	ENSRNOG00000006420	Rbm38	89	55.696	Rattus_norvegicus
ENSPMEG00000015770	rbm38	92	50.847	ENSRROG00000036388	-	88	48.729	Rhinopithecus_roxellana
ENSPMEG00000015770	rbm38	91	56.838	ENSSBOG00000031053	RBM38	88	90.426	Saimiri_boliviensis_boliviensis
ENSPMEG00000015770	rbm38	98	56.746	ENSSFOG00015004453	rbm38	100	53.906	Scleropages_formosus
ENSPMEG00000015770	rbm38	98	61.328	ENSSDUG00000021082	RBM38	100	59.843	Seriola_dumerili
ENSPMEG00000015770	rbm38	100	87.795	ENSSDUG00000022611	rbm38	100	87.795	Seriola_dumerili
ENSPMEG00000015770	rbm38	98	61.328	ENSSLDG00000011778	RBM38	100	59.449	Seriola_lalandi_dorsalis
ENSPMEG00000015770	rbm38	100	87.795	ENSSLDG00000010845	rbm38	100	87.795	Seriola_lalandi_dorsalis
ENSPMEG00000015770	rbm38	98	60.784	ENSSPAG00000020989	RBM38	100	59.449	Stegastes_partitus
ENSPMEG00000015770	rbm38	100	89.370	ENSSPAG00000011113	rbm38	100	89.370	Stegastes_partitus
ENSPMEG00000015770	rbm38	91	57.692	ENSSSCG00000007504	RBM38	89	55.556	Sus_scrofa
ENSPMEG00000015770	rbm38	100	78.740	ENSTRUG00000024954	rbm38	100	75.197	Takifugu_rubripes
ENSPMEG00000015770	rbm38	98	59.449	ENSTRUG00000019869	-	100	59.449	Takifugu_rubripes
ENSPMEG00000015770	rbm38	94	60.166	ENSTNIG00000007093	-	100	58.506	Tetraodon_nigroviridis
ENSPMEG00000015770	rbm38	74	64.021	ENSUAMG00000019780	RBM38	89	55.128	Ursus_americanus
ENSPMEG00000015770	rbm38	91	57.692	ENSVVUG00000017246	RBM38	89	56.838	Vulpes_vulpes
ENSPMEG00000015770	rbm38	76	62.887	ENSXETG00000011268	rbm38	98	55.649	Xenopus_tropicalis
ENSPMEG00000015770	rbm38	83	53.540	ENSXCOG00000017324	-	62	75.000	Xiphophorus_couchianus
ENSPMEG00000015770	rbm38	100	97.244	ENSXMAG00000023662	rbm38	100	97.244	Xiphophorus_maculatus