EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMEG00000016324 (Gene tree)
Gene ID: 106918763
Gene Symbol: ern1
Alias: -
Full Name: endoplasmic reticulum to nucleus signaling 2
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Plus strand
Length: 25189 bases
Position: chrKQ551303.1:308201-333389
Accession: 106918763
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000013937	Ribonuc_2-5A	PF06479.12	3e-40	1	1
ENSPMEP00000013955	Ribonuc_2-5A	PF06479.12	3.3e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000021790	-	3042	-	ENSPMEP00000013937	1013 (aa)	-	-
ENSPMET00000021812	-	4800	XM_014988770	ENSPMEP00000013955	1060 (aa)	XP_014844256	UPI00072DCF51

Gene Model

Click here to download ENSPMEG00000016324's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000016324's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMEG00000016324	ern1	63	54.009	ENSPMEG00000004696	-	98	53.555

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000016324	ern1	96	89.084	ENSAPOG00000009999	ern1	95	89.084	Acanthochromis_polyacanthus
ENSPMEG00000016324	ern1	99	86.398	ENSACIG00000021716	ern1	98	86.398	Amphilophus_citrinellus
ENSPMEG00000016324	ern1	94	90.873	ENSAOCG00000012309	ern1	93	90.873	Amphiprion_ocellaris
ENSPMEG00000016324	ern1	96	89.105	ENSAPEG00000011263	ern1	98	92.865	Amphiprion_percula
ENSPMEG00000016324	ern1	99	85.514	ENSATEG00000024468	ern1	98	85.514	Anabas_testudineus
ENSPMEG00000016324	ern1	97	88.602	ENSACLG00000027919	ern1	96	88.602	Astatotilapia_calliptera
ENSPMEG00000016324	ern1	99	79.032	ENSAMXG00000000944	ern1	99	79.032	Astyanax_mexicanus
ENSPMEG00000016324	ern1	92	87.553	ENSCSEG00000014500	ern1	99	86.476	Cynoglossus_semilaevis
ENSPMEG00000016324	ern1	100	91.932	ENSCVAG00000002988	ern1	100	91.932	Cyprinodon_variegatus
ENSPMEG00000016324	ern1	91	81.256	ENSDARG00000013997	ern1	100	81.535	Danio_rerio
ENSPMEG00000016324	ern1	97	77.303	ENSELUG00000005957	ern1	99	77.303	Esox_lucius
ENSPMEG00000016324	ern1	99	91.046	ENSFHEG00000005578	ern1	99	91.046	Fundulus_heteroclitus
ENSPMEG00000016324	ern1	90	85.637	ENSGMOG00000011232	ern1	100	86.859	Gadus_morhua
ENSPMEG00000016324	ern1	100	97.642	ENSGAFG00000020231	ern1	100	97.642	Gambusia_affinis
ENSPMEG00000016324	ern1	90	89.227	ENSGACG00000011700	ern1	97	90.491	Gasterosteus_aculeatus
ENSPMEG00000016324	ern1	97	87.912	ENSHBUG00000012581	ern1	95	88.998	Haplochromis_burtoni
ENSPMEG00000016324	ern1	94	85.119	ENSHCOG00000016199	ern1	94	85.119	Hippocampus_comes
ENSPMEG00000016324	ern1	99	78.083	ENSIPUG00000011083	ern1	98	78.083	Ictalurus_punctatus
ENSPMEG00000016324	ern1	99	86.391	ENSKMAG00000019499	ern1	98	86.471	Kryptolebias_marmoratus
ENSPMEG00000016324	ern1	100	80.722	ENSLBEG00000025907	ern1	99	81.903	Labrus_bergylta
ENSPMEG00000016324	ern1	99	85.607	ENSMAMG00000023439	ern1	98	86.507	Mastacembelus_armatus
ENSPMEG00000016324	ern1	97	88.602	ENSMZEG00005003221	ern1	96	88.602	Maylandia_zebra
ENSPMEG00000016324	ern1	91	90.939	ENSMMOG00000007650	ern1	97	89.333	Mola_mola
ENSPMEG00000016324	ern1	91	90.676	ENSMALG00000017775	ern1	89	90.676	Monopterus_albus
ENSPMEG00000016324	ern1	97	88.620	ENSNBRG00000002179	ern1	94	89.703	Neolamprologus_brichardi
ENSPMEG00000016324	ern1	90	90.481	ENSONIG00000017169	ern1	99	90.481	Oreochromis_niloticus
ENSPMEG00000016324	ern1	99	84.317	ENSORLG00000008940	ern1	100	85.171	Oryzias_latipes
ENSPMEG00000016324	ern1	99	84.133	ENSORLG00020018387	ern1	100	84.986	Oryzias_latipes_hni
ENSPMEG00000016324	ern1	99	83.977	ENSORLG00015007946	ern1	100	84.787	Oryzias_latipes_hsok
ENSPMEG00000016324	ern1	99	85.529	ENSOMEG00000011741	ern1	100	85.529	Oryzias_melastigma
ENSPMEG00000016324	ern1	90	83.514	ENSPKIG00000005593	ern1	97	83.386	Paramormyrops_kingsleyae
ENSPMEG00000016324	ern1	92	88.571	ENSPMGG00000020442	ern1	97	86.673	Periophthalmus_magnuspinnatus
ENSPMEG00000016324	ern1	100	99.528	ENSPFOG00000007378	ern1	100	99.528	Poecilia_formosa
ENSPMEG00000016324	ern1	100	99.528	ENSPLAG00000014780	ern1	100	99.528	Poecilia_latipinna
ENSPMEG00000016324	ern1	100	98.962	ENSPREG00000006286	ern1	100	98.962	Poecilia_reticulata
ENSPMEG00000016324	ern1	97	88.506	ENSPNYG00000017929	ern1	98	90.675	Pundamilia_nyererei
ENSPMEG00000016324	ern1	98	80.574	ENSPNAG00000029447	ern1	99	80.670	Pygocentrus_nattereri
ENSPMEG00000016324	ern1	96	87.538	ENSSMAG00000015042	ern1	95	86.320	Scophthalmus_maximus
ENSPMEG00000016324	ern1	99	87.535	ENSSDUG00000009098	ern1	98	87.535	Seriola_dumerili
ENSPMEG00000016324	ern1	99	87.442	ENSSLDG00000023254	ern1	98	87.442	Seriola_lalandi_dorsalis
ENSPMEG00000016324	ern1	96	89.331	ENSSPAG00000017539	ern1	95	89.331	Stegastes_partitus
ENSPMEG00000016324	ern1	96	85.598	ENSTRUG00000001041	ern1	95	86.829	Takifugu_rubripes
ENSPMEG00000016324	ern1	90	89.674	ENSTNIG00000017990	ern1	99	90.211	Tetraodon_nigroviridis
ENSPMEG00000016324	ern1	100	93.910	ENSXCOG00000010330	ern1	97	99.077	Xiphophorus_couchianus
ENSPMEG00000016324	ern1	100	98.019	ENSXMAG00000001310	ern1	100	98.019	Xiphophorus_maculatus