EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMEG00000016339 (Gene tree)
Gene ID: 106924736
Gene Symbol: srsf5a
Alias: -
Full Name: serine and arginine rich splicing factor 5
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Plus strand
Length: 9008 bases
Position: chrKQ551700.1:65827-74834
Accession: 106924736
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000030112	RRM_1	PF00076.22	6.6e-32	1	2
ENSPMEP00000030112	RRM_1	PF00076.22	6.6e-32	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000032414	-	2178	XM_014998587	ENSPMEP00000030112	320 (aa)	XP_014854073	UPI00072DED94

Gene Model

Click here to download ENSPMEG00000016339's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000016339's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMEG00000016339	srsf5a	92	53.000	ENSPMEG00000012751	srsf5b	84	67.910
ENSPMEG00000016339	srsf5a	65	39.815	ENSPMEG00000002388	-	79	40.845
ENSPMEG00000016339	srsf5a	59	60.714	ENSPMEG00000023638	srsf4	52	61.702
ENSPMEG00000016339	srsf5a	57	40.860	ENSPMEG00000008809	srsf9	68	42.781

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000016339	srsf5a	100	67.178	ENSAPOG00000017395	srsf5a	80	78.431	Acanthochromis_polyacanthus
ENSPMEG00000016339	srsf5a	85	68.132	ENSACIG00000011892	srsf5a	98	75.714	Amphilophus_citrinellus
ENSPMEG00000016339	srsf5a	78	69.076	ENSAOCG00000014967	srsf5a	82	79.608	Amphiprion_ocellaris
ENSPMEG00000016339	srsf5a	78	69.076	ENSAPEG00000009297	srsf5a	82	79.608	Amphiprion_percula
ENSPMEG00000016339	srsf5a	88	76.325	ENSATEG00000000198	srsf5a	84	81.961	Anabas_testudineus
ENSPMEG00000016339	srsf5a	60	70.466	ENSAPLG00000002469	-	70	69.430	Anas_platyrhynchos
ENSPMEG00000016339	srsf5a	60	72.251	ENSACAG00000029015	-	68	70.157	Anolis_carolinensis
ENSPMEG00000016339	srsf5a	78	83.133	ENSACLG00000027166	srsf5a	82	83.529	Astatotilapia_calliptera
ENSPMEG00000016339	srsf5a	60	77.551	ENSAMXG00000030476	srsf5a	91	66.537	Astyanax_mexicanus
ENSPMEG00000016339	srsf5a	60	72.917	ENSCPBG00000021518	-	70	71.875	Chrysemys_picta_bellii
ENSPMEG00000016339	srsf5a	60	58.163	ENSCSAVG00000011376	-	78	58.586	Ciona_savignyi
ENSPMEG00000016339	srsf5a	79	83.858	ENSCSEG00000008109	srsf5a	79	83.268	Cynoglossus_semilaevis
ENSPMEG00000016339	srsf5a	78	94.422	ENSCVAG00000016982	srsf5a	98	95.556	Cyprinodon_variegatus
ENSPMEG00000016339	srsf5a	61	78.974	ENSDARG00000029818	srsf5a	100	75.000	Danio_rerio
ENSPMEG00000016339	srsf5a	78	64.751	ENSELUG00000020439	srsf5a	81	67.717	Esox_lucius
ENSPMEG00000016339	srsf5a	65	62.447	ENSFALG00000005098	-	64	70.157	Ficedula_albicollis
ENSPMEG00000016339	srsf5a	79	92.045	ENSFHEG00000003955	srsf5a	97	90.345	Fundulus_heteroclitus
ENSPMEG00000016339	srsf5a	60	79.581	ENSGMOG00000000869	srsf5a	94	78.534	Gadus_morhua
ENSPMEG00000016339	srsf5a	65	70.048	ENSGALG00000033259	SRSF5A	63	69.634	Gallus_gallus
ENSPMEG00000016339	srsf5a	93	80.323	ENSGAFG00000018237	srsf5a	94	80.000	Gambusia_affinis
ENSPMEG00000016339	srsf5a	60	82.199	ENSGACG00000011761	srsf5a	70	82.199	Gasterosteus_aculeatus
ENSPMEG00000016339	srsf5a	60	72.917	ENSGAGG00000007312	-	70	71.875	Gopherus_agassizii
ENSPMEG00000016339	srsf5a	78	83.133	ENSHBUG00000014048	srsf5a	82	83.922	Haplochromis_burtoni
ENSPMEG00000016339	srsf5a	60	83.770	ENSHCOG00000017557	srsf5a	62	83.770	Hippocampus_comes
ENSPMEG00000016339	srsf5a	60	76.119	ENSIPUG00000003439	srsf5a	69	80.628	Ictalurus_punctatus
ENSPMEG00000016339	srsf5a	60	83.770	ENSKMAG00000014937	srsf5a	91	76.677	Kryptolebias_marmoratus
ENSPMEG00000016339	srsf5a	60	85.641	ENSLBEG00000017153	srsf5a	74	85.641	Labrus_bergylta
ENSPMEG00000016339	srsf5a	60	74.869	ENSLACG00000017874	-	70	74.869	Latimeria_chalumnae
ENSPMEG00000016339	srsf5a	79	76.984	ENSMAMG00000000192	srsf5a	84	77.647	Mastacembelus_armatus
ENSPMEG00000016339	srsf5a	78	83.133	ENSMZEG00005010485	srsf5a	82	83.922	Maylandia_zebra
ENSPMEG00000016339	srsf5a	63	69.118	ENSMGAG00000011888	-	96	69.364	Meleagris_gallopavo
ENSPMEG00000016339	srsf5a	60	83.246	ENSMMOG00000009793	srsf5a	90	73.649	Mola_mola
ENSPMEG00000016339	srsf5a	100	63.580	ENSMALG00000021194	srsf5a	90	68.456	Monopterus_albus
ENSPMEG00000016339	srsf5a	78	82.731	ENSNBRG00000000771	srsf5a	82	83.137	Neolamprologus_brichardi
ENSPMEG00000016339	srsf5a	78	82.731	ENSONIG00000019583	srsf5a	82	83.137	Oreochromis_niloticus
ENSPMEG00000016339	srsf5a	78	81.928	ENSORLG00000009268	srsf5a	85	81.176	Oryzias_latipes
ENSPMEG00000016339	srsf5a	78	81.928	ENSORLG00020003281	srsf5	85	81.176	Oryzias_latipes_hni
ENSPMEG00000016339	srsf5a	78	81.928	ENSORLG00015023075	srsf5	85	81.176	Oryzias_latipes_hsok
ENSPMEG00000016339	srsf5a	78	81.928	ENSOMEG00000000628	srsf5a	85	81.569	Oryzias_melastigma
ENSPMEG00000016339	srsf5a	60	77.665	ENSPKIG00000002054	srsf5a	68	79.581	Paramormyrops_kingsleyae
ENSPMEG00000016339	srsf5a	77	67.886	ENSPSIG00000008238	-	69	69.271	Pelodiscus_sinensis
ENSPMEG00000016339	srsf5a	80	61.569	ENSPMGG00000020125	srsf5a	73	60.000	Periophthalmus_magnuspinnatus
ENSPMEG00000016339	srsf5a	100	99.375	ENSPFOG00000022993	srsf5a	100	99.375	Poecilia_formosa
ENSPMEG00000016339	srsf5a	99	99.373	ENSPLAG00000005508	srsf5a	99	99.373	Poecilia_latipinna
ENSPMEG00000016339	srsf5a	100	98.131	ENSPREG00000018091	srsf5a	100	98.131	Poecilia_reticulata
ENSPMEG00000016339	srsf5a	78	83.133	ENSPNYG00000021245	srsf5a	82	83.922	Pundamilia_nyererei
ENSPMEG00000016339	srsf5a	60	79.058	ENSPNAG00000021333	srsf5a	66	79.058	Pygocentrus_nattereri
ENSPMEG00000016339	srsf5a	78	75.969	ENSSFOG00015008377	srsf5	66	80.105	Scleropages_formosus
ENSPMEG00000016339	srsf5a	84	75.899	ENSSMAG00000010899	srsf5a	66	85.500	Scophthalmus_maximus
ENSPMEG00000016339	srsf5a	79	67.063	ENSSDUG00000006103	srsf5a	82	78.039	Seriola_dumerili
ENSPMEG00000016339	srsf5a	79	67.460	ENSSLDG00000004146	srsf5a	81	78.431	Seriola_lalandi_dorsalis
ENSPMEG00000016339	srsf5a	60	68.586	ENSSPUG00000002052	-	68	67.016	Sphenodon_punctatus
ENSPMEG00000016339	srsf5a	78	78.715	ENSSPAG00000002821	srsf5a	82	78.039	Stegastes_partitus
ENSPMEG00000016339	srsf5a	72	72.052	ENSTGUG00000011492	-	68	70.157	Taeniopygia_guttata
ENSPMEG00000016339	srsf5a	100	66.563	ENSTRUG00000022908	srsf5a	83	80.469	Takifugu_rubripes
ENSPMEG00000016339	srsf5a	60	71.500	ENSXETG00000017937	srsf5a	72	75.521	Xenopus_tropicalis
ENSPMEG00000016339	srsf5a	100	80.938	ENSXCOG00000015338	srsf5a	100	91.022	Xiphophorus_couchianus
ENSPMEG00000016339	srsf5a	100	96.273	ENSXMAG00000012823	srsf5a	100	96.273	Xiphophorus_maculatus