EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMEG00000016355 (Gene tree)
Gene ID: 106926725
Gene Symbol: -
Alias: -
Full Name: uncharacterized LOC106926725
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Plus strand
Length: 4640 bases
Position: chrKQ551869.1:264050-268689
Accession: 106926725
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000030139	RVT_1	PF00078.27	3.4e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000032427	-	4640	XM_015001820	ENSPMEP00000030139	1215 (aa)	XP_014857306	UPI00072DF047

Gene Model

Click here to download ENSPMEG00000016355's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000016355's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMEG00000016355	-	61	39.276	ENSPMEG00000022292	-	68	39.211
ENSPMEG00000016355	-	62	60.263	ENSPMEG00000019585	-	97	60.263
ENSPMEG00000016355	-	64	34.917	ENSPMEG00000008618	-	67	34.917
ENSPMEG00000016355	-	58	41.769	ENSPMEG00000023031	-	65	41.769

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000016355	-	76	56.338	ENSAPOG00000008045	-	96	56.338	Acanthochromis_polyacanthus
ENSPMEG00000016355	-	53	43.524	ENSAPOG00000013817	-	83	43.910	Acanthochromis_polyacanthus
ENSPMEG00000016355	-	92	51.187	ENSAPOG00000012135	-	97	51.187	Acanthochromis_polyacanthus
ENSPMEG00000016355	-	53	43.524	ENSAPOG00000013711	-	77	43.524	Acanthochromis_polyacanthus
ENSPMEG00000016355	-	88	43.893	ENSACLG00000027730	-	92	43.893	Astatotilapia_calliptera
ENSPMEG00000016355	-	51	38.498	ENSACLG00000015735	-	71	38.413	Astatotilapia_calliptera
ENSPMEG00000016355	-	67	38.045	ENSACLG00000013572	-	53	38.045	Astatotilapia_calliptera
ENSPMEG00000016355	-	99	33.386	ENSACLG00000017808	-	78	33.621	Astatotilapia_calliptera
ENSPMEG00000016355	-	99	49.383	ENSACLG00000024091	-	79	49.383	Astatotilapia_calliptera
ENSPMEG00000016355	-	91	44.376	ENSACLG00000019876	-	73	44.376	Astatotilapia_calliptera
ENSPMEG00000016355	-	99	50.657	ENSACLG00000017161	-	78	50.740	Astatotilapia_calliptera
ENSPMEG00000016355	-	99	32.911	ENSACLG00000002180	-	81	32.911	Astatotilapia_calliptera
ENSPMEG00000016355	-	99	49.465	ENSACLG00000009628	-	79	49.465	Astatotilapia_calliptera
ENSPMEG00000016355	-	99	30.267	ENSACLG00000018060	-	77	30.267	Astatotilapia_calliptera
ENSPMEG00000016355	-	99	49.465	ENSACLG00000025719	-	79	49.465	Astatotilapia_calliptera
ENSPMEG00000016355	-	91	44.376	ENSACLG00000014619	-	73	44.376	Astatotilapia_calliptera
ENSPMEG00000016355	-	63	58.549	ENSACLG00000007343	-	95	58.808	Astatotilapia_calliptera
ENSPMEG00000016355	-	66	48.266	ENSACLG00000000367	-	91	48.266	Astatotilapia_calliptera
ENSPMEG00000016355	-	99	48.245	ENSACLG00000026879	-	80	48.245	Astatotilapia_calliptera
ENSPMEG00000016355	-	83	47.065	ENSACLG00000001563	-	98	47.065	Astatotilapia_calliptera
ENSPMEG00000016355	-	74	40.830	ENSACLG00000010042	-	69	40.830	Astatotilapia_calliptera
ENSPMEG00000016355	-	99	33.307	ENSACLG00000000499	-	78	33.543	Astatotilapia_calliptera
ENSPMEG00000016355	-	68	40.398	ENSACLG00000018181	-	90	40.398	Astatotilapia_calliptera
ENSPMEG00000016355	-	99	33.386	ENSACLG00000014870	-	78	33.621	Astatotilapia_calliptera
ENSPMEG00000016355	-	98	34.404	ENSACLG00000027291	-	77	34.404	Astatotilapia_calliptera
ENSPMEG00000016355	-	60	53.469	ENSACLG00000008862	-	100	53.469	Astatotilapia_calliptera
ENSPMEG00000016355	-	60	48.431	ENSACLG00000004062	-	99	48.431	Astatotilapia_calliptera
ENSPMEG00000016355	-	89	42.908	ENSAMXG00000038169	-	83	42.908	Astyanax_mexicanus
ENSPMEG00000016355	-	99	33.778	ENSAMXG00000040892	-	78	33.700	Astyanax_mexicanus
ENSPMEG00000016355	-	80	47.363	ENSAMXG00000030987	-	71	42.936	Astyanax_mexicanus
ENSPMEG00000016355	-	60	30.469	ENSAMXG00000041112	-	62	30.378	Astyanax_mexicanus
ENSPMEG00000016355	-	99	32.938	ENSAMXG00000038578	-	90	32.938	Astyanax_mexicanus
ENSPMEG00000016355	-	88	35.874	ENSAMXG00000031698	-	68	35.874	Astyanax_mexicanus
ENSPMEG00000016355	-	59	40.000	ENSAMXG00000043892	-	93	39.866	Astyanax_mexicanus
ENSPMEG00000016355	-	91	33.728	ENSAMXG00000030902	-	79	33.728	Astyanax_mexicanus
ENSPMEG00000016355	-	65	43.073	ENSCPBG00000011626	-	95	43.073	Chrysemys_picta_bellii
ENSPMEG00000016355	-	51	39.936	ENSCPBG00000008522	-	100	39.936	Chrysemys_picta_bellii
ENSPMEG00000016355	-	63	38.107	ENSCVAG00000009912	-	98	38.308	Cyprinodon_variegatus
ENSPMEG00000016355	-	91	33.988	ENSELUG00000000948	-	96	34.266	Esox_lucius
ENSPMEG00000016355	-	71	43.820	ENSFHEG00000000971	-	75	43.820	Fundulus_heteroclitus
ENSPMEG00000016355	-	60	57.551	ENSGAFG00000009062	-	97	57.844	Gambusia_affinis
ENSPMEG00000016355	-	92	37.731	ENSGAGG00000022240	-	80	36.643	Gopherus_agassizii
ENSPMEG00000016355	-	69	47.450	ENSGAGG00000014450	-	76	47.450	Gopherus_agassizii
ENSPMEG00000016355	-	65	45.088	ENSGAGG00000020521	-	96	45.088	Gopherus_agassizii
ENSPMEG00000016355	-	65	45.088	ENSGAGG00000012039	-	96	45.088	Gopherus_agassizii
ENSPMEG00000016355	-	82	36.321	ENSGAGG00000025282	-	92	36.321	Gopherus_agassizii
ENSPMEG00000016355	-	68	47.899	ENSIPUG00000000601	-	92	47.899	Ictalurus_punctatus
ENSPMEG00000016355	-	86	35.347	ENSMAMG00000018393	-	99	35.347	Mastacembelus_armatus
ENSPMEG00000016355	-	69	40.302	ENSMZEG00005000633	-	80	40.603	Maylandia_zebra
ENSPMEG00000016355	-	54	57.530	ENSMALG00000019305	-	100	57.530	Monopterus_albus
ENSPMEG00000016355	-	99	33.202	ENSORLG00000029675	-	77	33.202	Oryzias_latipes
ENSPMEG00000016355	-	92	49.606	ENSORLG00000022369	-	78	49.606	Oryzias_latipes
ENSPMEG00000016355	-	83	37.892	ENSORLG00000028632	-	95	37.619	Oryzias_latipes
ENSPMEG00000016355	-	74	37.689	ENSORLG00000026676	-	95	38.121	Oryzias_latipes
ENSPMEG00000016355	-	99	50.000	ENSORLG00000026546	-	79	50.000	Oryzias_latipes
ENSPMEG00000016355	-	99	49.756	ENSORLG00000028609	-	80	49.756	Oryzias_latipes
ENSPMEG00000016355	-	99	63.084	ENSORLG00000027831	-	81	63.106	Oryzias_latipes
ENSPMEG00000016355	-	99	48.248	ENSORLG00000024904	-	80	48.248	Oryzias_latipes
ENSPMEG00000016355	-	99	49.835	ENSORLG00000026665	-	79	49.835	Oryzias_latipes
ENSPMEG00000016355	-	99	50.000	ENSORLG00000024233	-	79	50.000	Oryzias_latipes
ENSPMEG00000016355	-	99	48.403	ENSORLG00000025739	-	79	48.403	Oryzias_latipes
ENSPMEG00000016355	-	60	58.616	ENSORLG00000025478	-	95	58.616	Oryzias_latipes
ENSPMEG00000016355	-	92	34.979	ENSORLG00000026629	-	74	35.319	Oryzias_latipes
ENSPMEG00000016355	-	99	33.307	ENSORLG00000029874	-	77	33.307	Oryzias_latipes
ENSPMEG00000016355	-	92	35.374	ENSORLG00000026873	-	74	35.459	Oryzias_latipes
ENSPMEG00000016355	-	99	48.403	ENSORLG00000024220	-	79	48.403	Oryzias_latipes
ENSPMEG00000016355	-	92	35.119	ENSORLG00000023181	-	74	35.459	Oryzias_latipes
ENSPMEG00000016355	-	99	48.157	ENSORLG00000030265	-	79	48.157	Oryzias_latipes
ENSPMEG00000016355	-	99	49.594	ENSORLG00000030542	-	80	49.594	Oryzias_latipes
ENSPMEG00000016355	-	99	48.075	ENSORLG00000027568	-	79	48.075	Oryzias_latipes
ENSPMEG00000016355	-	99	49.837	ENSORLG00000028795	-	80	49.837	Oryzias_latipes
ENSPMEG00000016355	-	57	51.989	ENSORLG00000029791	-	99	51.989	Oryzias_latipes
ENSPMEG00000016355	-	99	48.166	ENSORLG00020003869	-	79	48.166	Oryzias_latipes_hni
ENSPMEG00000016355	-	99	48.085	ENSORLG00020014203	-	79	48.085	Oryzias_latipes_hni
ENSPMEG00000016355	-	99	48.318	ENSORLG00020020268	-	80	48.318	Oryzias_latipes_hni
ENSPMEG00000016355	-	99	48.157	ENSORLG00020008293	-	79	48.157	Oryzias_latipes_hni
ENSPMEG00000016355	-	51	56.735	ENSORLG00020002554	-	99	56.735	Oryzias_latipes_hni
ENSPMEG00000016355	-	99	48.318	ENSORLG00020001422	-	79	48.318	Oryzias_latipes_hni
ENSPMEG00000016355	-	99	49.756	ENSORLG00015018878	-	80	49.756	Oryzias_latipes_hsok
ENSPMEG00000016355	-	99	49.756	ENSORLG00015017778	-	80	49.756	Oryzias_latipes_hsok
ENSPMEG00000016355	-	54	39.323	ENSOMEG00000006705	-	93	39.323	Oryzias_melastigma
ENSPMEG00000016355	-	99	50.369	ENSOMEG00000003712	-	80	50.369	Oryzias_melastigma
ENSPMEG00000016355	-	99	33.964	ENSOMEG00000009987	-	80	33.964	Oryzias_melastigma
ENSPMEG00000016355	-	54	41.168	ENSPKIG00000000391	-	99	41.168	Paramormyrops_kingsleyae
ENSPMEG00000016355	-	99	41.728	ENSPSIG00000000767	-	86	41.728	Pelodiscus_sinensis
ENSPMEG00000016355	-	99	40.920	ENSPSIG00000000489	-	82	41.304	Pelodiscus_sinensis
ENSPMEG00000016355	-	65	51.134	ENSPSIG00000001658	-	91	51.134	Pelodiscus_sinensis
ENSPMEG00000016355	-	90	48.986	ENSPSIG00000000994	-	79	48.986	Pelodiscus_sinensis
ENSPMEG00000016355	-	61	51.402	ENSPSIG00000013781	-	99	51.402	Pelodiscus_sinensis
ENSPMEG00000016355	-	88	45.304	ENSPSIG00000000353	-	89	45.304	Pelodiscus_sinensis
ENSPMEG00000016355	-	73	37.097	ENSPREG00000004954	-	81	32.556	Poecilia_reticulata
ENSPMEG00000016355	-	92	33.114	ENSPREG00000000390	-	75	33.114	Poecilia_reticulata
ENSPMEG00000016355	-	50	41.195	ENSPNAG00000022277	-	69	41.195	Pygocentrus_nattereri
ENSPMEG00000016355	-	99	49.110	ENSSDUG00000002460	-	96	49.110	Seriola_dumerili
ENSPMEG00000016355	-	57	45.152	ENSSLDG00000004385	-	71	45.152	Seriola_lalandi_dorsalis
ENSPMEG00000016355	-	99	47.360	ENSXMAG00000026031	-	79	47.658	Xiphophorus_maculatus
ENSPMEG00000016355	-	93	46.916	ENSXMAG00000030100	-	80	46.916	Xiphophorus_maculatus
ENSPMEG00000016355	-	94	34.922	ENSXMAG00000021213	-	80	34.375	Xiphophorus_maculatus
ENSPMEG00000016355	-	75	38.534	ENSXMAG00000030089	-	89	38.534	Xiphophorus_maculatus
ENSPMEG00000016355	-	94	34.914	ENSXMAG00000026594	-	80	34.370	Xiphophorus_maculatus
ENSPMEG00000016355	-	99	34.824	ENSXMAG00000023079	-	79	34.824	Xiphophorus_maculatus
ENSPMEG00000016355	-	93	33.689	ENSXMAG00000021298	-	75	33.689	Xiphophorus_maculatus
ENSPMEG00000016355	-	99	34.745	ENSXMAG00000023503	-	79	34.745	Xiphophorus_maculatus
ENSPMEG00000016355	-	93	33.497	ENSXMAG00000023319	-	75	33.497	Xiphophorus_maculatus