EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMEG00000016361 (Gene tree)
Gene ID: 106934138
Gene Symbol: LARP4B
Alias: -
Full Name: La ribonucleoprotein domain family member 4B
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Plus strand
Length: 40650 bases
Position: chrKQ552713.1:89132-129781
Accession: 106934138
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000013988	La	PF05383.17	1.4e-13	1	1
ENSPMEP00000013998	La	PF05383.17	1.5e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000021856	LARP4B-201	6566	XM_015013861	ENSPMEP00000013988	713 (aa)	XP_014869347	-
ENSPMET00000032431	LARP4B-202	6740	XM_015013859	ENSPMEP00000013998	771 (aa)	XP_014869345	UPI00072DA07B

Gene Model

Click here to download ENSPMEG00000016361's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000016361's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMEG00000016361	LARP4B	85	37.209	ENSPMEG00000002720	larp4ab	72	39.356
ENSPMEG00000016361	LARP4B	84	37.283	ENSPMEG00000014271	larp4aa	83	39.266

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000016361	LARP4B	100	55.693	ENSG00000107929	LARP4B	100	54.839	Homo_sapiens
ENSPMEG00000016361	LARP4B	100	74.324	ENSAPOG00000020531	LARP4B	94	87.143	Acanthochromis_polyacanthus
ENSPMEG00000016361	LARP4B	92	55.660	ENSAMEG00000001810	LARP4B	100	52.612	Ailuropoda_melanoleuca
ENSPMEG00000016361	LARP4B	98	71.294	ENSAOCG00000007887	-	99	87.500	Amphiprion_ocellaris
ENSPMEG00000016361	LARP4B	94	83.149	ENSAPEG00000002512	LARP4B	96	81.417	Amphiprion_percula
ENSPMEG00000016361	LARP4B	100	81.146	ENSATEG00000012614	LARP4B	100	81.146	Anabas_testudineus
ENSPMEG00000016361	LARP4B	100	58.509	ENSAPLG00000003813	LARP4B	98	57.322	Anas_platyrhynchos
ENSPMEG00000016361	LARP4B	100	59.184	ENSACAG00000002858	LARP4B	100	58.238	Anolis_carolinensis
ENSPMEG00000016361	LARP4B	100	55.446	ENSANAG00000007531	-	100	54.467	Aotus_nancymaae
ENSPMEG00000016361	LARP4B	100	82.483	ENSACLG00000026356	LARP4B	96	87.595	Astatotilapia_calliptera
ENSPMEG00000016361	LARP4B	94	52.168	ENSAMXG00000003335	larp4b	96	51.421	Astyanax_mexicanus
ENSPMEG00000016361	LARP4B	97	56.117	ENSBTAG00000013899	LARP4B	100	54.805	Bos_taurus
ENSPMEG00000016361	LARP4B	100	55.335	ENSCJAG00000018434	LARP4B	100	54.342	Callithrix_jacchus
ENSPMEG00000016361	LARP4B	96	54.616	ENSCAFG00020004209	LARP4B	100	53.731	Canis_lupus_dingo
ENSPMEG00000016361	LARP4B	97	54.145	ENSCHIG00000013543	LARP4B	98	53.756	Capra_hircus
ENSPMEG00000016361	LARP4B	89	60.401	ENSTSYG00000002568	LARP4B	100	59.784	Carlito_syrichta
ENSPMEG00000016361	LARP4B	89	54.545	ENSCAPG00000009725	LARP4B	72	71.543	Cavia_aperea
ENSPMEG00000016361	LARP4B	100	55.211	ENSCPOG00000009375	LARP4B	100	54.591	Cavia_porcellus
ENSPMEG00000016361	LARP4B	100	55.074	ENSCCAG00000024869	LARP4B	100	54.342	Cebus_capucinus
ENSPMEG00000016361	LARP4B	100	55.941	ENSCATG00000019750	LARP4B	100	55.211	Cercocebus_atys
ENSPMEG00000016361	LARP4B	100	56.147	ENSCLAG00000011570	LARP4B	100	55.400	Chinchilla_lanigera
ENSPMEG00000016361	LARP4B	70	78.788	ENSCHOG00000007831	-	56	78.788	Choloepus_hoffmanni
ENSPMEG00000016361	LARP4B	100	58.704	ENSCPBG00000017063	LARP4B	100	58.493	Chrysemys_picta_bellii
ENSPMEG00000016361	LARP4B	100	54.084	ENSCANG00000038021	LARP4B	100	53.350	Colobus_angolensis_palliatus
ENSPMEG00000016361	LARP4B	100	54.938	ENSCGRG00001022930	Larp4b	100	60.035	Cricetulus_griseus_chok1gshd
ENSPMEG00000016361	LARP4B	100	54.938	ENSCGRG00000006022	Larp4b	100	60.035	Cricetulus_griseus_crigri
ENSPMEG00000016361	LARP4B	100	73.370	ENSCSEG00000007342	LARP4B	77	84.479	Cynoglossus_semilaevis
ENSPMEG00000016361	LARP4B	100	87.900	ENSCVAG00000008910	LARP4B	100	88.317	Cyprinodon_variegatus
ENSPMEG00000016361	LARP4B	94	53.316	ENSDARG00000062146	larp4b	97	52.133	Danio_rerio
ENSPMEG00000016361	LARP4B	96	54.617	ENSDNOG00000045543	-	100	61.583	Dasypus_novemcinctus
ENSPMEG00000016361	LARP4B	100	52.743	ENSDORG00000009328	Larp4b	100	56.472	Dipodomys_ordii
ENSPMEG00000016361	LARP4B	88	57.746	ENSETEG00000011249	LARP4B	91	57.423	Echinops_telfairi
ENSPMEG00000016361	LARP4B	91	56.351	ENSEASG00005019068	-	100	54.218	Equus_asinus_asinus
ENSPMEG00000016361	LARP4B	91	56.622	ENSECAG00000024040	LARP4B	100	54.467	Equus_caballus
ENSPMEG00000016361	LARP4B	93	54.533	ENSEEUG00000008391	LARP4B	98	52.513	Erinaceus_europaeus
ENSPMEG00000016361	LARP4B	100	71.302	ENSELUG00000008626	LARP4B	100	71.610	Esox_lucius
ENSPMEG00000016361	LARP4B	88	41.679	ENSELUG00000001417	-	77	48.431	Esox_lucius
ENSPMEG00000016361	LARP4B	92	56.604	ENSFCAG00000000721	-	100	54.408	Felis_catus
ENSPMEG00000016361	LARP4B	100	59.588	ENSFALG00000006961	LARP4B	100	58.612	Ficedula_albicollis
ENSPMEG00000016361	LARP4B	100	56.258	ENSFDAG00000006158	LARP4B	97	55.019	Fukomys_damarensis
ENSPMEG00000016361	LARP4B	100	72.005	ENSFHEG00000013037	LARP4B	100	72.135	Fundulus_heteroclitus
ENSPMEG00000016361	LARP4B	68	77.143	ENSGMOG00000010818	-	80	80.435	Gadus_morhua
ENSPMEG00000016361	LARP4B	100	58.831	ENSGALG00000006672	LARP4B	100	58.069	Gallus_gallus
ENSPMEG00000016361	LARP4B	100	73.529	ENSGACG00000017535	LARP4B	98	72.950	Gasterosteus_aculeatus
ENSPMEG00000016361	LARP4B	94	57.066	ENSGAGG00000008598	LARP4B	100	56.680	Gopherus_agassizii
ENSPMEG00000016361	LARP4B	100	55.569	ENSGGOG00000003572	LARP4B	100	54.715	Gorilla_gorilla
ENSPMEG00000016361	LARP4B	100	83.287	ENSHBUG00000007535	LARP4B	100	84.401	Haplochromis_burtoni
ENSPMEG00000016361	LARP4B	100	55.817	ENSHGLG00000012936	LARP4B	100	60.386	Heterocephalus_glaber_female
ENSPMEG00000016361	LARP4B	86	50.837	ENSHGLG00100017261	-	100	49.772	Heterocephalus_glaber_male
ENSPMEG00000016361	LARP4B	100	55.831	ENSHGLG00100016220	-	100	55.955	Heterocephalus_glaber_male
ENSPMEG00000016361	LARP4B	91	91.071	ENSHCOG00000011581	LARP4B	87	77.692	Hippocampus_comes
ENSPMEG00000016361	LARP4B	94	52.128	ENSIPUG00000009705	larp4b	98	51.197	Ictalurus_punctatus
ENSPMEG00000016361	LARP4B	90	62.267	ENSSTOG00000000587	LARP4B	95	61.720	Ictidomys_tridecemlineatus
ENSPMEG00000016361	LARP4B	100	55.487	ENSJJAG00000020847	Larp4b	100	54.545	Jaculus_jaculus
ENSPMEG00000016361	LARP4B	100	84.021	ENSKMAG00000021674	LARP4B	100	84.407	Kryptolebias_marmoratus
ENSPMEG00000016361	LARP4B	80	83.758	ENSLBEG00000025293	-	82	86.767	Labrus_bergylta
ENSPMEG00000016361	LARP4B	94	59.615	ENSLACG00000009492	LARP4B	100	57.531	Latimeria_chalumnae
ENSPMEG00000016361	LARP4B	100	63.104	ENSLOCG00000012290	larp4b	100	63.118	Lepisosteus_oculatus
ENSPMEG00000016361	LARP4B	100	54.957	ENSLAFG00000015334	LARP4B	100	54.613	Loxodonta_africana
ENSPMEG00000016361	LARP4B	100	55.941	ENSMFAG00000001766	LARP4B	100	53.350	Macaca_fascicularis
ENSPMEG00000016361	LARP4B	100	55.941	ENSMMUG00000005279	LARP4B	100	55.211	Macaca_mulatta
ENSPMEG00000016361	LARP4B	100	55.817	ENSMNEG00000014019	LARP4B	100	53.226	Macaca_nemestrina
ENSPMEG00000016361	LARP4B	100	55.995	ENSMLEG00000035198	LARP4B	100	55.143	Mandrillus_leucophaeus
ENSPMEG00000016361	LARP4B	100	81.026	ENSMAMG00000013742	LARP4B	100	80.666	Mastacembelus_armatus
ENSPMEG00000016361	LARP4B	94	81.669	ENSMZEG00005014594	-	100	82.763	Maylandia_zebra
ENSPMEG00000016361	LARP4B	100	72.865	ENSMZEG00005006498	-	95	90.280	Maylandia_zebra
ENSPMEG00000016361	LARP4B	100	56.273	ENSMGAG00000005472	LARP4B	93	63.069	Meleagris_gallopavo
ENSPMEG00000016361	LARP4B	100	55.802	ENSMAUG00000021657	Larp4b	100	59.711	Mesocricetus_auratus
ENSPMEG00000016361	LARP4B	100	56.242	ENSMICG00000001301	LARP4B	100	55.599	Microcebus_murinus
ENSPMEG00000016361	LARP4B	91	59.551	ENSMOCG00000021452	Larp4b	100	59.230	Microtus_ochrogaster
ENSPMEG00000016361	LARP4B	86	96.552	ENSMMOG00000011253	-	100	68.552	Mola_mola
ENSPMEG00000016361	LARP4B	100	55.811	ENSMODG00000005957	LARP4B	100	55.428	Monodelphis_domestica
ENSPMEG00000016361	LARP4B	100	68.583	ENSMALG00000012432	LARP4B	100	69.048	Monopterus_albus
ENSPMEG00000016361	LARP4B	100	55.473	MGP_CAROLIEiJ_G0018216	Larp4b	100	59.935	Mus_caroli
ENSPMEG00000016361	LARP4B	100	55.707	ENSMUSG00000033499	Larp4b	100	59.903	Mus_musculus
ENSPMEG00000016361	LARP4B	100	55.501	MGP_PahariEiJ_G0019266	Larp4b	100	59.935	Mus_pahari
ENSPMEG00000016361	LARP4B	100	55.583	MGP_SPRETEiJ_G0019074	Larp4b	100	60.064	Mus_spretus
ENSPMEG00000016361	LARP4B	92	56.486	ENSMPUG00000016220	LARP4B	97	53.856	Mustela_putorius_furo
ENSPMEG00000016361	LARP4B	88	56.204	ENSMLUG00000005880	LARP4B	99	53.989	Myotis_lucifugus
ENSPMEG00000016361	LARP4B	100	55.514	ENSNGAG00000001750	Larp4b	100	54.647	Nannospalax_galili
ENSPMEG00000016361	LARP4B	100	66.345	ENSNBRG00000020018	LARP4B	94	73.571	Neolamprologus_brichardi
ENSPMEG00000016361	LARP4B	100	55.569	ENSNLEG00000013442	LARP4B	100	54.839	Nomascus_leucogenys
ENSPMEG00000016361	LARP4B	83	47.148	ENSMEUG00000013114	-	83	47.148	Notamacropus_eugenii
ENSPMEG00000016361	LARP4B	100	53.194	ENSOPRG00000003300	LARP4B	100	51.966	Ochotona_princeps
ENSPMEG00000016361	LARP4B	100	51.295	ENSODEG00000001109	LARP4B	100	55.897	Octodon_degus
ENSPMEG00000016361	LARP4B	100	81.737	ENSONIG00000017705	LARP4B	100	82.759	Oreochromis_niloticus
ENSPMEG00000016361	LARP4B	100	55.542	ENSOANG00000006100	LARP4B	100	55.172	Ornithorhynchus_anatinus
ENSPMEG00000016361	LARP4B	100	53.076	ENSOCUG00000004950	LARP4B	97	52.651	Oryctolagus_cuniculus
ENSPMEG00000016361	LARP4B	100	81.371	ENSORLG00000006080	LARP4B	100	81.371	Oryzias_latipes
ENSPMEG00000016361	LARP4B	100	82.402	ENSORLG00020020940	LARP4B	100	82.402	Oryzias_latipes_hni
ENSPMEG00000016361	LARP4B	100	82.353	ENSORLG00015020608	LARP4B	100	82.353	Oryzias_latipes_hsok
ENSPMEG00000016361	LARP4B	100	80.307	ENSOMEG00000019619	LARP4B	100	85.057	Oryzias_melastigma
ENSPMEG00000016361	LARP4B	96	55.762	ENSOGAG00000011540	LARP4B	99	55.099	Otolemur_garnettii
ENSPMEG00000016361	LARP4B	97	53.935	ENSOARG00000015320	LARP4B	98	52.830	Ovis_aries
ENSPMEG00000016361	LARP4B	100	55.817	ENSPPAG00000039232	LARP4B	100	54.827	Pan_paniscus
ENSPMEG00000016361	LARP4B	92	56.873	ENSPPRG00000009489	LARP4B	100	54.218	Panthera_pardus
ENSPMEG00000016361	LARP4B	92	56.873	ENSPTIG00000008543	LARP4B	100	54.218	Panthera_tigris_altaica
ENSPMEG00000016361	LARP4B	100	55.817	ENSPTRG00000002235	LARP4B	100	54.827	Pan_troglodytes
ENSPMEG00000016361	LARP4B	100	55.941	ENSPANG00000023546	LARP4B	100	53.350	Papio_anubis
ENSPMEG00000016361	LARP4B	99	59.949	ENSPKIG00000012368	LARP4B	99	59.949	Paramormyrops_kingsleyae
ENSPMEG00000016361	LARP4B	72	68.000	ENSPSIG00000005600	LARP4B	99	67.385	Pelodiscus_sinensis
ENSPMEG00000016361	LARP4B	71	73.091	ENSPMGG00000008261	LARP4B	76	73.091	Periophthalmus_magnuspinnatus
ENSPMEG00000016361	LARP4B	100	54.827	ENSPEMG00000014052	Larp4b	100	54.084	Peromyscus_maniculatus_bairdii
ENSPMEG00000016361	LARP4B	100	99.351	ENSPFOG00000000029	LARP4B	100	99.351	Poecilia_formosa
ENSPMEG00000016361	LARP4B	100	98.444	ENSPLAG00000002871	LARP4B	100	98.444	Poecilia_latipinna
ENSPMEG00000016361	LARP4B	100	55.390	ENSPPYG00000002035	LARP4B	97	54.523	Pongo_abelii
ENSPMEG00000016361	LARP4B	100	54.364	ENSPCOG00000014688	LARP4B	100	53.836	Propithecus_coquereli
ENSPMEG00000016361	LARP4B	89	55.247	ENSPVAG00000009784	LARP4B	83	55.641	Pteropus_vampyrus
ENSPMEG00000016361	LARP4B	100	82.207	ENSPNYG00000024252	LARP4B	100	83.310	Pundamilia_nyererei
ENSPMEG00000016361	LARP4B	95	53.059	ENSPNAG00000028956	larp4b	97	52.470	Pygocentrus_nattereri
ENSPMEG00000016361	LARP4B	99	55.417	ENSRNOG00000015888	Larp4b	100	54.783	Rattus_norvegicus
ENSPMEG00000016361	LARP4B	100	55.941	ENSRBIG00000033294	LARP4B	100	55.211	Rhinopithecus_bieti
ENSPMEG00000016361	LARP4B	100	56.064	ENSRROG00000033879	LARP4B	100	55.335	Rhinopithecus_roxellana
ENSPMEG00000016361	LARP4B	100	50.124	ENSSBOG00000021109	LARP4B	100	49.876	Saimiri_boliviensis_boliviensis
ENSPMEG00000016361	LARP4B	100	57.834	ENSSHAG00000013392	LARP4B	100	57.179	Sarcophilus_harrisii
ENSPMEG00000016361	LARP4B	92	61.286	ENSSFOG00015003256	LARP4B	93	59.548	Scleropages_formosus
ENSPMEG00000016361	LARP4B	84	100.000	ENSSMAG00000005982	-	99	100.000	Scophthalmus_maximus
ENSPMEG00000016361	LARP4B	100	84.840	ENSSDUG00000006704	LARP4B	100	85.278	Seriola_dumerili
ENSPMEG00000016361	LARP4B	100	73.278	ENSSLDG00000020660	LARP4B	97	82.857	Seriola_lalandi_dorsalis
ENSPMEG00000016361	LARP4B	71	84.112	ENSSARG00000001243	-	79	84.112	Sorex_araneus
ENSPMEG00000016361	LARP4B	100	59.642	ENSSPUG00000013734	-	100	63.333	Sphenodon_punctatus
ENSPMEG00000016361	LARP4B	100	62.707	ENSSPUG00000002102	-	100	63.291	Sphenodon_punctatus
ENSPMEG00000016361	LARP4B	87	93.103	ENSSPAG00000014628	LARP4B	70	93.103	Stegastes_partitus
ENSPMEG00000016361	LARP4B	100	55.076	ENSSSCG00000011162	LARP4B	97	60.336	Sus_scrofa
ENSPMEG00000016361	LARP4B	100	58.913	ENSTGUG00000000811	-	100	57.522	Taeniopygia_guttata
ENSPMEG00000016361	LARP4B	100	69.367	ENSTNIG00000004571	-	98	69.241	Tetraodon_nigroviridis
ENSPMEG00000016361	LARP4B	99	67.509	ENSTNIG00000007991	LARP4B	99	72.337	Tetraodon_nigroviridis
ENSPMEG00000016361	LARP4B	73	59.722	ENSTTRG00000011151	LARP4B	83	60.000	Tursiops_truncatus
ENSPMEG00000016361	LARP4B	86	57.266	ENSUAMG00000016461	LARP4B	95	55.988	Ursus_americanus
ENSPMEG00000016361	LARP4B	96	55.371	ENSUMAG00000016127	LARP4B	100	53.607	Ursus_maritimus
ENSPMEG00000016361	LARP4B	96	52.474	ENSVVUG00000008641	LARP4B	100	53.607	Vulpes_vulpes
ENSPMEG00000016361	LARP4B	98	59.530	ENSXETG00000016882	larp4b	98	59.216	Xenopus_tropicalis
ENSPMEG00000016361	LARP4B	100	77.351	ENSXCOG00000019952	LARP4B	100	76.852	Xiphophorus_couchianus
ENSPMEG00000016361	LARP4B	100	95.860	ENSXMAG00000021533	LARP4B	100	95.860	Xiphophorus_maculatus