EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMEG00000016387 (Gene tree)
Gene ID: 106910179
Gene Symbol: trnau1apa
Alias: -
Full Name: tRNA selenocysteine 1 associated protein 1
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Minus strand
Length: 12720 bases
Position: chrKQ554375.1:32111-44830
Accession: 106910179
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000014005	RRM_1	PF00076.22	6.2e-25	1	2
ENSPMEP00000014005	RRM_1	PF00076.22	6.2e-25	2	2
ENSPMEP00000030142	RRM_1	PF00076.22	3.4e-24	1	2
ENSPMEP00000030142	RRM_1	PF00076.22	3.4e-24	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000032430	-	858	-	ENSPMEP00000030142	285 (aa)	-	-
ENSPMET00000022116	-	2234	XM_014976758	ENSPMEP00000014005	315 (aa)	XP_014832244	-

Gene Model

Click here to download ENSPMEG00000016387's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000016387's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMEG00000016387	trnau1apa	62	30.348	ENSPMEG00000013469	tia1l	63	30.811
ENSPMEG00000016387	trnau1apa	91	41.590	ENSPMEG00000012743	trnau1apb	94	40.541

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000016387	trnau1apa	92	56.552	ENSG00000180098	TRNAU1AP	96	55.862	Homo_sapiens
ENSPMEG00000016387	trnau1apa	97	80.719	ENSAPOG00000007148	TRNAU1AP	99	81.633	Acanthochromis_polyacanthus
ENSPMEG00000016387	trnau1apa	92	56.897	ENSAMEG00000011367	TRNAU1AP	96	56.207	Ailuropoda_melanoleuca
ENSPMEG00000016387	trnau1apa	87	91.358	ENSACIG00000004161	trnau1apa	93	91.358	Amphilophus_citrinellus
ENSPMEG00000016387	trnau1apa	97	82.295	ENSAOCG00000008056	trnau1apa	99	80.328	Amphiprion_ocellaris
ENSPMEG00000016387	trnau1apa	97	82.295	ENSAPEG00000008868	trnau1apa	99	80.328	Amphiprion_percula
ENSPMEG00000016387	trnau1apa	97	78.275	ENSATEG00000012140	trnau1apa	99	77.955	Anabas_testudineus
ENSPMEG00000016387	trnau1apa	89	58.801	ENSAPLG00000002606	TRNAU1AP	97	58.427	Anas_platyrhynchos
ENSPMEG00000016387	trnau1apa	72	40.741	ENSACAG00000004205	-	86	40.000	Anolis_carolinensis
ENSPMEG00000016387	trnau1apa	91	46.996	ENSACAG00000003995	-	95	47.826	Anolis_carolinensis
ENSPMEG00000016387	trnau1apa	92	56.552	ENSANAG00000018976	TRNAU1AP	96	55.862	Aotus_nancymaae
ENSPMEG00000016387	trnau1apa	97	81.639	ENSACLG00000018515	trnau1apa	99	80.328	Astatotilapia_calliptera
ENSPMEG00000016387	trnau1apa	89	70.000	ENSAMXG00000029240	-	100	70.000	Astyanax_mexicanus
ENSPMEG00000016387	trnau1apa	97	50.323	ENSAMXG00000013750	trnau1apa	97	50.804	Astyanax_mexicanus
ENSPMEG00000016387	trnau1apa	92	56.207	ENSBTAG00000010393	TRNAU1AP	96	55.517	Bos_taurus
ENSPMEG00000016387	trnau1apa	92	56.552	ENSCJAG00000009717	TRNAU1AP	96	55.862	Callithrix_jacchus
ENSPMEG00000016387	trnau1apa	92	56.552	ENSCAFG00000011735	TRNAU1AP	96	55.862	Canis_familiaris
ENSPMEG00000016387	trnau1apa	92	56.552	ENSCAFG00020023584	TRNAU1AP	96	55.862	Canis_lupus_dingo
ENSPMEG00000016387	trnau1apa	92	56.207	ENSCHIG00000023215	TRNAU1AP	96	55.517	Capra_hircus
ENSPMEG00000016387	trnau1apa	92	56.552	ENSTSYG00000003506	TRNAU1AP	96	55.862	Carlito_syrichta
ENSPMEG00000016387	trnau1apa	92	56.552	ENSCPOG00000001925	TRNAU1AP	96	55.862	Cavia_porcellus
ENSPMEG00000016387	trnau1apa	92	56.552	ENSCCAG00000037506	TRNAU1AP	96	55.862	Cebus_capucinus
ENSPMEG00000016387	trnau1apa	92	56.552	ENSCATG00000044617	TRNAU1AP	96	55.862	Cercocebus_atys
ENSPMEG00000016387	trnau1apa	92	56.552	ENSCLAG00000008223	TRNAU1AP	96	55.862	Chinchilla_lanigera
ENSPMEG00000016387	trnau1apa	92	56.552	ENSCSAG00000001014	TRNAU1AP	96	55.862	Chlorocebus_sabaeus
ENSPMEG00000016387	trnau1apa	87	57.795	ENSCPBG00000000121	TRNAU1AP	96	58.175	Chrysemys_picta_bellii
ENSPMEG00000016387	trnau1apa	59	47.399	ENSCSAVG00000011781	-	86	49.080	Ciona_savignyi
ENSPMEG00000016387	trnau1apa	92	48.966	ENSCANG00000041949	TRNAU1AP	93	53.012	Colobus_angolensis_palliatus
ENSPMEG00000016387	trnau1apa	92	56.552	ENSCGRG00001004713	Trnau1ap	96	55.862	Cricetulus_griseus_chok1gshd
ENSPMEG00000016387	trnau1apa	92	56.552	ENSCGRG00000014532	Trnau1ap	96	55.862	Cricetulus_griseus_crigri
ENSPMEG00000016387	trnau1apa	97	68.269	ENSCSEG00000006663	trnau1apa	89	83.582	Cynoglossus_semilaevis
ENSPMEG00000016387	trnau1apa	97	85.621	ENSCVAG00000018069	trnau1apa	99	85.621	Cyprinodon_variegatus
ENSPMEG00000016387	trnau1apa	97	47.727	ENSDARG00000101323	trnau1apa	95	45.955	Danio_rerio
ENSPMEG00000016387	trnau1apa	92	56.552	ENSDNOG00000033009	TRNAU1AP	96	55.862	Dasypus_novemcinctus
ENSPMEG00000016387	trnau1apa	57	59.281	ENSDNOG00000047959	-	88	58.235	Dasypus_novemcinctus
ENSPMEG00000016387	trnau1apa	89	57.303	ENSDORG00000006349	Trnau1ap	94	61.468	Dipodomys_ordii
ENSPMEG00000016387	trnau1apa	91	35.385	FBgn0031607	CG15440	96	33.333	Drosophila_melanogaster
ENSPMEG00000016387	trnau1apa	76	57.143	ENSETEG00000012594	TRNAU1AP	94	57.143	Echinops_telfairi
ENSPMEG00000016387	trnau1apa	59	46.250	ENSEBUG00000006349	-	56	46.250	Eptatretus_burgeri
ENSPMEG00000016387	trnau1apa	92	56.552	ENSEASG00005010062	TRNAU1AP	90	63.014	Equus_asinus_asinus
ENSPMEG00000016387	trnau1apa	92	56.552	ENSECAG00000012980	TRNAU1AP	90	63.014	Equus_caballus
ENSPMEG00000016387	trnau1apa	97	65.584	ENSELUG00000017686	trnau1apa	99	67.340	Esox_lucius
ENSPMEG00000016387	trnau1apa	89	80.000	ENSELUG00000022790	-	96	80.000	Esox_lucius
ENSPMEG00000016387	trnau1apa	92	56.552	ENSFCAG00000013401	TRNAU1AP	96	55.862	Felis_catus
ENSPMEG00000016387	trnau1apa	87	57.414	ENSFALG00000001371	TRNAU1AP	96	57.795	Ficedula_albicollis
ENSPMEG00000016387	trnau1apa	92	56.552	ENSFDAG00000018599	TRNAU1AP	96	55.862	Fukomys_damarensis
ENSPMEG00000016387	trnau1apa	74	91.139	ENSFHEG00000018232	trnau1apa	89	87.160	Fundulus_heteroclitus
ENSPMEG00000016387	trnau1apa	97	61.613	ENSGMOG00000016508	trnau1apa	99	60.968	Gadus_morhua
ENSPMEG00000016387	trnau1apa	92	54.483	ENSGALG00000001310	-	96	55.290	Gallus_gallus
ENSPMEG00000016387	trnau1apa	68	37.273	ENSGALG00000012721	C2H6orf52	79	38.498	Gallus_gallus
ENSPMEG00000016387	trnau1apa	77	97.541	ENSGAFG00000004928	trnau1apa	99	95.038	Gambusia_affinis
ENSPMEG00000016387	trnau1apa	97	79.672	ENSGACG00000001443	trnau1apa	99	79.672	Gasterosteus_aculeatus
ENSPMEG00000016387	trnau1apa	87	57.795	ENSGAGG00000004940	TRNAU1AP	96	58.175	Gopherus_agassizii
ENSPMEG00000016387	trnau1apa	92	56.552	ENSGGOG00000003511	TRNAU1AP	96	55.862	Gorilla_gorilla
ENSPMEG00000016387	trnau1apa	97	89.552	ENSHBUG00000002510	trnau1apa	93	89.552	Haplochromis_burtoni
ENSPMEG00000016387	trnau1apa	92	56.552	ENSHGLG00000010380	TRNAU1AP	96	55.862	Heterocephalus_glaber_female
ENSPMEG00000016387	trnau1apa	86	57.915	ENSHGLG00100012699	TRNAU1AP	91	58.301	Heterocephalus_glaber_male
ENSPMEG00000016387	trnau1apa	97	72.756	ENSHCOG00000014770	trnau1apa	99	70.513	Hippocampus_comes
ENSPMEG00000016387	trnau1apa	92	56.552	ENSSTOG00000000079	TRNAU1AP	96	55.862	Ictidomys_tridecemlineatus
ENSPMEG00000016387	trnau1apa	92	57.401	ENSJJAG00000010128	Trnau1ap	96	55.862	Jaculus_jaculus
ENSPMEG00000016387	trnau1apa	97	84.590	ENSKMAG00000001230	trnau1apa	99	84.590	Kryptolebias_marmoratus
ENSPMEG00000016387	trnau1apa	97	75.000	ENSLBEG00000011683	trnau1apa	99	74.760	Labrus_bergylta
ENSPMEG00000016387	trnau1apa	91	50.000	ENSLACG00000005541	TRNAU1AP	95	50.859	Latimeria_chalumnae
ENSPMEG00000016387	trnau1apa	89	59.779	ENSLOCG00000004041	trnau1apa	96	57.439	Lepisosteus_oculatus
ENSPMEG00000016387	trnau1apa	92	56.897	ENSLAFG00000007628	TRNAU1AP	96	56.207	Loxodonta_africana
ENSPMEG00000016387	trnau1apa	92	56.552	ENSMFAG00000043751	TRNAU1AP	96	55.862	Macaca_fascicularis
ENSPMEG00000016387	trnau1apa	92	56.552	ENSMMUG00000006561	TRNAU1AP	96	55.862	Macaca_mulatta
ENSPMEG00000016387	trnau1apa	92	56.552	ENSMNEG00000044201	TRNAU1AP	96	55.862	Macaca_nemestrina
ENSPMEG00000016387	trnau1apa	92	56.552	ENSMLEG00000015649	TRNAU1AP	96	55.862	Mandrillus_leucophaeus
ENSPMEG00000016387	trnau1apa	97	79.355	ENSMAMG00000001247	trnau1apa	99	77.097	Mastacembelus_armatus
ENSPMEG00000016387	trnau1apa	97	81.639	ENSMZEG00005017722	trnau1apa	99	80.328	Maylandia_zebra
ENSPMEG00000016387	trnau1apa	89	57.678	ENSMGAG00000002105	TRNAU1AP	96	58.052	Meleagris_gallopavo
ENSPMEG00000016387	trnau1apa	92	56.552	ENSMICG00000008386	TRNAU1AP	96	55.862	Microcebus_murinus
ENSPMEG00000016387	trnau1apa	92	56.552	ENSMOCG00000011189	Trnau1ap	96	55.862	Microtus_ochrogaster
ENSPMEG00000016387	trnau1apa	95	69.751	ENSMMOG00000012107	trnau1apa	96	69.039	Mola_mola
ENSPMEG00000016387	trnau1apa	92	55.517	ENSMODG00000010927	TRNAU1AP	96	54.949	Monodelphis_domestica
ENSPMEG00000016387	trnau1apa	97	80.519	ENSMALG00000016778	trnau1apa	99	80.519	Monopterus_albus
ENSPMEG00000016387	trnau1apa	92	56.552	MGP_CAROLIEiJ_G0026563	Trnau1ap	96	56.075	Mus_caroli
ENSPMEG00000016387	trnau1apa	92	56.552	ENSMUSG00000028898	Trnau1ap	96	56.075	Mus_musculus
ENSPMEG00000016387	trnau1apa	92	56.552	MGP_PahariEiJ_G0028896	Trnau1ap	84	72.881	Mus_pahari
ENSPMEG00000016387	trnau1apa	92	56.552	MGP_SPRETEiJ_G0027544	Trnau1ap	96	56.075	Mus_spretus
ENSPMEG00000016387	trnau1apa	92	56.897	ENSMPUG00000015511	TRNAU1AP	96	56.207	Mustela_putorius_furo
ENSPMEG00000016387	trnau1apa	92	56.552	ENSMLUG00000012586	TRNAU1AP	96	55.862	Myotis_lucifugus
ENSPMEG00000016387	trnau1apa	92	56.552	ENSNGAG00000015881	Trnau1ap	93	58.801	Nannospalax_galili
ENSPMEG00000016387	trnau1apa	95	74.558	ENSNBRG00000001758	trnau1apa	96	74.205	Neolamprologus_brichardi
ENSPMEG00000016387	trnau1apa	92	56.552	ENSNLEG00000009822	TRNAU1AP	96	55.862	Nomascus_leucogenys
ENSPMEG00000016387	trnau1apa	89	57.678	ENSMEUG00000006117	TRNAU1AP	96	57.678	Notamacropus_eugenii
ENSPMEG00000016387	trnau1apa	53	61.250	ENSOPRG00000007084	-	55	58.621	Ochotona_princeps
ENSPMEG00000016387	trnau1apa	92	56.552	ENSODEG00000002970	TRNAU1AP	96	55.862	Octodon_degus
ENSPMEG00000016387	trnau1apa	79	87.149	ENSONIG00000004715	trnau1apa	98	85.200	Oreochromis_niloticus
ENSPMEG00000016387	trnau1apa	96	41.391	ENSOANG00000005325	-	95	42.759	Ornithorhynchus_anatinus
ENSPMEG00000016387	trnau1apa	92	55.172	ENSOCUG00000011704	-	96	54.483	Oryctolagus_cuniculus
ENSPMEG00000016387	trnau1apa	97	45.246	ENSOCUG00000002353	-	96	46.207	Oryctolagus_cuniculus
ENSPMEG00000016387	trnau1apa	83	44.106	ENSOCUG00000006834	-	97	43.726	Oryctolagus_cuniculus
ENSPMEG00000016387	trnau1apa	97	80.328	ENSORLG00000010428	trnau1apa	99	80.328	Oryzias_latipes
ENSPMEG00000016387	trnau1apa	97	80.328	ENSORLG00020000926	trnau1ap	99	80.328	Oryzias_latipes_hni
ENSPMEG00000016387	trnau1apa	97	80.328	ENSORLG00015009858	trnau1ap	99	80.328	Oryzias_latipes_hsok
ENSPMEG00000016387	trnau1apa	97	80.656	ENSOMEG00000007873	trnau1apa	99	80.656	Oryzias_melastigma
ENSPMEG00000016387	trnau1apa	92	56.552	ENSOGAG00000002274	TRNAU1AP	93	58.801	Otolemur_garnettii
ENSPMEG00000016387	trnau1apa	92	56.207	ENSOARG00000002843	TRNAU1AP	96	55.517	Ovis_aries
ENSPMEG00000016387	trnau1apa	92	56.552	ENSPPAG00000033927	TRNAU1AP	96	55.862	Pan_paniscus
ENSPMEG00000016387	trnau1apa	92	56.552	ENSPPRG00000004416	TRNAU1AP	96	55.862	Panthera_pardus
ENSPMEG00000016387	trnau1apa	92	56.552	ENSPTIG00000016677	TRNAU1AP	96	55.862	Panthera_tigris_altaica
ENSPMEG00000016387	trnau1apa	88	52.529	ENSPTRG00000000434	-	90	54.959	Pan_troglodytes
ENSPMEG00000016387	trnau1apa	92	56.552	ENSPANG00000016019	TRNAU1AP	96	55.862	Papio_anubis
ENSPMEG00000016387	trnau1apa	91	56.055	ENSPKIG00000015511	trnau1apa	92	54.007	Paramormyrops_kingsleyae
ENSPMEG00000016387	trnau1apa	88	77.500	ENSPKIG00000022205	-	94	77.500	Paramormyrops_kingsleyae
ENSPMEG00000016387	trnau1apa	87	58.555	ENSPSIG00000006864	TRNAU1AP	96	58.175	Pelodiscus_sinensis
ENSPMEG00000016387	trnau1apa	95	71.277	ENSPMGG00000023893	trnau1apa	96	69.395	Periophthalmus_magnuspinnatus
ENSPMEG00000016387	trnau1apa	92	56.207	ENSPEMG00000007877	Trnau1ap	96	55.517	Peromyscus_maniculatus_bairdii
ENSPMEG00000016387	trnau1apa	57	54.706	ENSPMAG00000000592	trnau1apa	95	53.757	Petromyzon_marinus
ENSPMEG00000016387	trnau1apa	75	50.847	ENSPMAG00000005934	trnau1apa	99	49.153	Petromyzon_marinus
ENSPMEG00000016387	trnau1apa	97	98.046	ENSPFOG00000008100	trnau1apa	99	98.046	Poecilia_formosa
ENSPMEG00000016387	trnau1apa	94	100.000	ENSPLAG00000010236	trnau1apa	100	100.000	Poecilia_latipinna
ENSPMEG00000016387	trnau1apa	85	100.000	ENSPREG00000019821	trnau1apa	94	100.000	Poecilia_reticulata
ENSPMEG00000016387	trnau1apa	81	48.936	ENSPPYG00000001639	-	95	48.988	Pongo_abelii
ENSPMEG00000016387	trnau1apa	89	49.027	ENSPCOG00000023470	-	94	49.027	Propithecus_coquereli
ENSPMEG00000016387	trnau1apa	92	56.552	ENSPCOG00000027712	-	96	55.862	Propithecus_coquereli
ENSPMEG00000016387	trnau1apa	92	56.552	ENSPVAG00000017214	TRNAU1AP	96	55.862	Pteropus_vampyrus
ENSPMEG00000016387	trnau1apa	97	80.323	ENSPNYG00000010130	trnau1apa	99	82.239	Pundamilia_nyererei
ENSPMEG00000016387	trnau1apa	95	52.727	ENSPNAG00000024905	trnau1apa	94	52.727	Pygocentrus_nattereri
ENSPMEG00000016387	trnau1apa	90	52.797	ENSRNOG00000055344	Trnau1ap	92	52.465	Rattus_norvegicus
ENSPMEG00000016387	trnau1apa	92	56.552	ENSRBIG00000029083	TRNAU1AP	96	55.862	Rhinopithecus_bieti
ENSPMEG00000016387	trnau1apa	92	56.552	ENSRROG00000029128	TRNAU1AP	96	55.862	Rhinopithecus_roxellana
ENSPMEG00000016387	trnau1apa	92	56.552	ENSSBOG00000021299	TRNAU1AP	96	55.862	Saimiri_boliviensis_boliviensis
ENSPMEG00000016387	trnau1apa	92	55.862	ENSSHAG00000008108	TRNAU1AP	96	55.290	Sarcophilus_harrisii
ENSPMEG00000016387	trnau1apa	97	75.000	ENSSMAG00000020851	trnau1apa	99	76.299	Scophthalmus_maximus
ENSPMEG00000016387	trnau1apa	97	78.641	ENSSDUG00000011734	trnau1apa	99	77.994	Seriola_dumerili
ENSPMEG00000016387	trnau1apa	95	67.153	ENSSLDG00000012101	trnau1apa	96	67.153	Seriola_lalandi_dorsalis
ENSPMEG00000016387	trnau1apa	89	58.427	ENSSARG00000007536	TRNAU1AP	96	58.801	Sorex_araneus
ENSPMEG00000016387	trnau1apa	97	52.131	ENSSPUG00000010400	-	96	53.901	Sphenodon_punctatus
ENSPMEG00000016387	trnau1apa	62	49.231	ENSSPUG00000010415	-	94	51.807	Sphenodon_punctatus
ENSPMEG00000016387	trnau1apa	97	81.639	ENSSPAG00000005029	trnau1apa	99	80.984	Stegastes_partitus
ENSPMEG00000016387	trnau1apa	92	56.552	ENSSSCG00000030284	TRNAU1AP	96	55.862	Sus_scrofa
ENSPMEG00000016387	trnau1apa	89	58.427	ENSTGUG00000000735	-	96	58.427	Taeniopygia_guttata
ENSPMEG00000016387	trnau1apa	66	41.709	ENSTGUG00000005908	-	99	40.201	Taeniopygia_guttata
ENSPMEG00000016387	trnau1apa	97	76.797	ENSTRUG00000003352	trnau1apa	99	73.856	Takifugu_rubripes
ENSPMEG00000016387	trnau1apa	97	73.701	ENSTNIG00000006129	trnau1apa	99	73.052	Tetraodon_nigroviridis
ENSPMEG00000016387	trnau1apa	77	51.020	ENSTBEG00000008049	-	94	51.515	Tupaia_belangeri
ENSPMEG00000016387	trnau1apa	92	56.552	ENSTTRG00000001854	TRNAU1AP	96	55.862	Tursiops_truncatus
ENSPMEG00000016387	trnau1apa	88	57.401	ENSUAMG00000008789	TRNAU1AP	96	58.555	Ursus_americanus
ENSPMEG00000016387	trnau1apa	92	56.552	ENSUMAG00000011068	TRNAU1AP	96	55.862	Ursus_maritimus
ENSPMEG00000016387	trnau1apa	77	56.735	ENSVPAG00000006778	TRNAU1AP	79	58.009	Vicugna_pacos
ENSPMEG00000016387	trnau1apa	91	57.143	ENSVVUG00000012518	TRNAU1AP	87	58.801	Vulpes_vulpes
ENSPMEG00000016387	trnau1apa	97	97.068	ENSXMAG00000017361	trnau1apa	99	97.068	Xiphophorus_maculatus