EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMEG00000016395 (Gene tree)
Gene ID: 106924008
Gene Symbol: si:ch211-212k18.5
Alias: -
Full Name: spalt like transcription factor 2
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Plus strand
Length: 6438 bases
Position: chrKQ551651.1:210012-216449
Accession: 106924008
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000030166	zf-C2H2	PF00096.26	5.6e-18	1	2
ENSPMEP00000030166	zf-C2H2	PF00096.26	5.6e-18	2	2
ENSPMEP00000014033	zf-C2H2	PF00096.26	4.8e-16	1	1
ENSPMEP00000030166	zf-met	PF12874.7	1.3e-10	1	2
ENSPMEP00000030166	zf-met	PF12874.7	1.3e-10	2	2
ENSPMEP00000014033	zf-met	PF12874.7	2.1e-09	1	2
ENSPMEP00000014033	zf-met	PF12874.7	2.1e-09	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000021905	-	4899	-	ENSPMEP00000014033	1137 (aa)	-	-
ENSPMET00000021900	-	4804	XM_014997474	ENSPMEP00000030166	1208 (aa)	XP_014852960	UPI00072EB336

Gene Model

Click here to download ENSPMEG00000016395's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000016395's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMEG00000016395	si:ch211-212k18.5	56	66.667	ENSPMEG00000006335	sall2	58	46.947

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000016395	si:ch211-212k18.5	99	75.629	ENSAPOG00000013387	si:ch211-212k18.5	99	74.672	Acanthochromis_polyacanthus
ENSPMEG00000016395	si:ch211-212k18.5	72	64.865	ENSAPOG00000015347	sall2	53	47.036	Acanthochromis_polyacanthus
ENSPMEG00000016395	si:ch211-212k18.5	85	79.485	ENSACIG00000019922	si:ch211-212k18.5	99	81.218	Amphilophus_citrinellus
ENSPMEG00000016395	si:ch211-212k18.5	99	72.664	ENSAOCG00000010737	si:ch211-212k18.5	99	72.445	Amphiprion_ocellaris
ENSPMEG00000016395	si:ch211-212k18.5	72	64.865	ENSAOCG00000016559	sall2	53	46.850	Amphiprion_ocellaris
ENSPMEG00000016395	si:ch211-212k18.5	99	72.924	ENSAPEG00000006751	si:ch211-212k18.5	99	72.690	Amphiprion_percula
ENSPMEG00000016395	si:ch211-212k18.5	79	80.930	ENSATEG00000001254	si:ch211-212k18.5	99	81.744	Anabas_testudineus
ENSPMEG00000016395	si:ch211-212k18.5	99	72.751	ENSACLG00000009709	si:ch211-212k18.5	99	72.525	Astatotilapia_calliptera
ENSPMEG00000016395	si:ch211-212k18.5	57	49.857	ENSAMXG00000020956	sall2	58	49.206	Astyanax_mexicanus
ENSPMEG00000016395	si:ch211-212k18.5	100	55.445	ENSAMXG00000010979	si:ch211-212k18.5	99	55.298	Astyanax_mexicanus
ENSPMEG00000016395	si:ch211-212k18.5	84	38.948	ENSCSEG00000021148	sall2	69	39.381	Cynoglossus_semilaevis
ENSPMEG00000016395	si:ch211-212k18.5	99	69.390	ENSCSEG00000004426	si:ch211-212k18.5	99	67.997	Cynoglossus_semilaevis
ENSPMEG00000016395	si:ch211-212k18.5	99	86.380	ENSCVAG00000007475	si:ch211-212k18.5	99	87.427	Cyprinodon_variegatus
ENSPMEG00000016395	si:ch211-212k18.5	65	48.289	ENSCVAG00000006032	sall2	51	65.000	Cyprinodon_variegatus
ENSPMEG00000016395	si:ch211-212k18.5	99	55.268	ENSDARG00000103316	si:ch211-212k18.5	95	54.056	Danio_rerio
ENSPMEG00000016395	si:ch211-212k18.5	100	57.106	ENSELUG00000024534	si:ch211-212k18.5	99	55.868	Esox_lucius
ENSPMEG00000016395	si:ch211-212k18.5	99	87.786	ENSFHEG00000017264	si:ch211-212k18.5	99	87.760	Fundulus_heteroclitus
ENSPMEG00000016395	si:ch211-212k18.5	56	66.667	ENSGAFG00000015194	sall2	58	47.011	Gambusia_affinis
ENSPMEG00000016395	si:ch211-212k18.5	100	94.045	ENSGAFG00000003746	si:ch211-212k18.5	99	95.250	Gambusia_affinis
ENSPMEG00000016395	si:ch211-212k18.5	100	72.862	ENSHBUG00000019672	si:ch211-212k18.5	99	73.067	Haplochromis_burtoni
ENSPMEG00000016395	si:ch211-212k18.5	99	59.687	ENSHCOG00000002842	si:ch211-212k18.5	99	57.452	Hippocampus_comes
ENSPMEG00000016395	si:ch211-212k18.5	100	54.584	ENSIPUG00000002559	sall2	99	51.852	Ictalurus_punctatus
ENSPMEG00000016395	si:ch211-212k18.5	57	47.878	ENSKMAG00000020172	sall2	58	45.778	Kryptolebias_marmoratus
ENSPMEG00000016395	si:ch211-212k18.5	99	75.671	ENSKMAG00000019657	si:ch211-212k18.5	99	75.103	Kryptolebias_marmoratus
ENSPMEG00000016395	si:ch211-212k18.5	99	71.217	ENSLBEG00000020887	si:ch211-212k18.5	99	69.389	Labrus_bergylta
ENSPMEG00000016395	si:ch211-212k18.5	74	84.778	ENSMAMG00000015887	si:ch211-212k18.5	99	84.778	Mastacembelus_armatus
ENSPMEG00000016395	si:ch211-212k18.5	99	72.751	ENSMZEG00005021214	si:ch211-212k18.5	99	72.607	Maylandia_zebra
ENSPMEG00000016395	si:ch211-212k18.5	94	80.652	ENSMMOG00000012726	si:ch211-212k18.5	99	79.753	Mola_mola
ENSPMEG00000016395	si:ch211-212k18.5	98	73.977	ENSMALG00000000979	si:ch211-212k18.5	97	73.542	Monopterus_albus
ENSPMEG00000016395	si:ch211-212k18.5	100	39.867	ENSNBRG00000017645	sall2	73	40.621	Neolamprologus_brichardi
ENSPMEG00000016395	si:ch211-212k18.5	100	69.224	ENSNBRG00000023948	si:ch211-212k18.5	99	66.945	Neolamprologus_brichardi
ENSPMEG00000016395	si:ch211-212k18.5	58	45.144	ENSORLG00000026871	sall2	59	45.418	Oryzias_latipes
ENSPMEG00000016395	si:ch211-212k18.5	99	70.435	ENSORLG00000030429	si:ch211-212k18.5	99	68.977	Oryzias_latipes
ENSPMEG00000016395	si:ch211-212k18.5	99	70.496	ENSORLG00020008145	si:ch211-212k18.5	99	69.428	Oryzias_latipes_hni
ENSPMEG00000016395	si:ch211-212k18.5	58	45.144	ENSORLG00020007873	sall2	59	45.286	Oryzias_latipes_hni
ENSPMEG00000016395	si:ch211-212k18.5	58	44.751	ENSORLG00015002422	sall2	59	45.020	Oryzias_latipes_hsok
ENSPMEG00000016395	si:ch211-212k18.5	99	69.452	ENSORLG00015004982	si:ch211-212k18.5	99	69.014	Oryzias_latipes_hsok
ENSPMEG00000016395	si:ch211-212k18.5	60	54.348	ENSOMEG00000012904	sall2	65	54.348	Oryzias_melastigma
ENSPMEG00000016395	si:ch211-212k18.5	99	69.244	ENSOMEG00000013949	si:ch211-212k18.5	99	69.408	Oryzias_melastigma
ENSPMEG00000016395	si:ch211-212k18.5	76	51.661	ENSPKIG00000009207	sall2	67	44.516	Paramormyrops_kingsleyae
ENSPMEG00000016395	si:ch211-212k18.5	100	65.965	ENSPMGG00000018714	si:ch211-212k18.5	99	65.496	Periophthalmus_magnuspinnatus
ENSPMEG00000016395	si:ch211-212k18.5	56	66.667	ENSPFOG00000016504	sall2	60	47.559	Poecilia_formosa
ENSPMEG00000016395	si:ch211-212k18.5	100	99.669	ENSPFOG00000023705	si:ch211-212k18.5	100	99.669	Poecilia_formosa
ENSPMEG00000016395	si:ch211-212k18.5	56	66.667	ENSPLAG00000018320	sall2	58	47.019	Poecilia_latipinna
ENSPMEG00000016395	si:ch211-212k18.5	100	99.091	ENSPLAG00000002577	si:ch211-212k18.5	100	99.091	Poecilia_latipinna
ENSPMEG00000016395	si:ch211-212k18.5	100	96.942	ENSPREG00000005292	si:ch211-212k18.5	100	96.942	Poecilia_reticulata
ENSPMEG00000016395	si:ch211-212k18.5	56	66.667	ENSPREG00000021908	sall2	51	46.667	Poecilia_reticulata
ENSPMEG00000016395	si:ch211-212k18.5	100	69.983	ENSPNYG00000021576	si:ch211-212k18.5	99	68.894	Pundamilia_nyererei
ENSPMEG00000016395	si:ch211-212k18.5	99	56.110	ENSPNAG00000006123	si:ch211-212k18.5	94	56.181	Pygocentrus_nattereri
ENSPMEG00000016395	si:ch211-212k18.5	99	72.877	ENSSMAG00000006241	si:ch211-212k18.5	99	70.923	Scophthalmus_maximus
ENSPMEG00000016395	si:ch211-212k18.5	99	76.339	ENSSDUG00000006164	si:ch211-212k18.5	99	75.184	Seriola_dumerili
ENSPMEG00000016395	si:ch211-212k18.5	99	78.066	ENSSLDG00000003393	si:ch211-212k18.5	99	76.816	Seriola_lalandi_dorsalis
ENSPMEG00000016395	si:ch211-212k18.5	100	73.853	ENSSPAG00000013435	si:ch211-212k18.5	97	73.939	Stegastes_partitus
ENSPMEG00000016395	si:ch211-212k18.5	100	69.481	ENSTRUG00000025082	si:ch211-212k18.5	98	68.020	Takifugu_rubripes
ENSPMEG00000016395	si:ch211-212k18.5	99	91.000	ENSXCOG00000000762	si:ch211-212k18.5	99	92.512	Xiphophorus_couchianus
ENSPMEG00000016395	si:ch211-212k18.5	99	93.942	ENSXMAG00000001461	si:ch211-212k18.5	99	95.258	Xiphophorus_maculatus