EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMEG00000016425 (Gene tree)
Gene ID: 106909488
Gene Symbol: lrpprc
Alias: -
Full Name: leucine rich pentatricopeptide repeat containing
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Plus strand
Length: 68147 bases
Position: chrKQ551070.1:442588-510734
Accession: 106909488
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000014061	PPR	PF01535.20	8.6e-39	1	6
ENSPMEP00000014061	PPR	PF01535.20	8.6e-39	2	6
ENSPMEP00000014061	PPR	PF01535.20	8.6e-39	3	6
ENSPMEP00000014061	PPR	PF01535.20	8.6e-39	4	6
ENSPMEP00000014061	PPR	PF01535.20	8.6e-39	5	6
ENSPMEP00000014061	PPR	PF01535.20	8.6e-39	6	6

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000032458	-	4966	XM_014975862	ENSPMEP00000014061	1412 (aa)	XP_014831348	UPI00072E52AC

Gene Model

Click here to download ENSPMEG00000016425's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000016425's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000016425	lrpprc	99	73.362	ENSAPOG00000016610	lrpprc	99	73.362	Acanthochromis_polyacanthus
ENSPMEG00000016425	lrpprc	94	52.288	ENSAMEG00000005852	LRPPRC	97	52.288	Ailuropoda_melanoleuca
ENSPMEG00000016425	lrpprc	99	70.270	ENSACIG00000009604	lrpprc	99	70.270	Amphilophus_citrinellus
ENSPMEG00000016425	lrpprc	99	74.508	ENSAOCG00000005886	lrpprc	99	74.508	Amphiprion_ocellaris
ENSPMEG00000016425	lrpprc	99	70.423	ENSAPEG00000002937	lrpprc	98	70.423	Amphiprion_percula
ENSPMEG00000016425	lrpprc	91	72.745	ENSATEG00000010555	lrpprc	98	71.374	Anabas_testudineus
ENSPMEG00000016425	lrpprc	95	55.695	ENSACAG00000029278	LRPPRC	99	54.056	Anolis_carolinensis
ENSPMEG00000016425	lrpprc	99	50.849	ENSANAG00000027440	LRPPRC	97	55.094	Aotus_nancymaae
ENSPMEG00000016425	lrpprc	96	68.873	ENSACLG00000023712	lrpprc	92	78.224	Astatotilapia_calliptera
ENSPMEG00000016425	lrpprc	99	50.424	ENSCJAG00000000794	LRPPRC	97	54.906	Callithrix_jacchus
ENSPMEG00000016425	lrpprc	98	51.118	ENSCHIG00000020173	LRPPRC	99	50.812	Capra_hircus
ENSPMEG00000016425	lrpprc	95	41.630	ENSCAPG00000013631	LRPPRC	99	41.630	Cavia_aperea
ENSPMEG00000016425	lrpprc	85	49.547	ENSCPOG00000000204	LRPPRC	99	49.547	Cavia_porcellus
ENSPMEG00000016425	lrpprc	99	50.141	ENSCCAG00000031900	LRPPRC	97	54.291	Cebus_capucinus
ENSPMEG00000016425	lrpprc	95	51.116	ENSCATG00000014187	LRPPRC	97	54.579	Cercocebus_atys
ENSPMEG00000016425	lrpprc	99	48.875	ENSCLAG00000005203	LRPPRC	99	48.875	Chinchilla_lanigera
ENSPMEG00000016425	lrpprc	95	51.524	ENSCSAG00000013233	LRPPRC	99	50.282	Chlorocebus_sabaeus
ENSPMEG00000016425	lrpprc	84	50.333	ENSCHOG00000003631	LRPPRC	84	50.333	Choloepus_hoffmanni
ENSPMEG00000016425	lrpprc	95	49.445	ENSCANG00000034961	LRPPRC	99	56.766	Colobus_angolensis_palliatus
ENSPMEG00000016425	lrpprc	99	49.540	ENSCGRG00001016261	Lrpprc	99	49.576	Cricetulus_griseus_chok1gshd
ENSPMEG00000016425	lrpprc	99	49.540	ENSCGRG00000004072	Lrpprc	99	49.576	Cricetulus_griseus_crigri
ENSPMEG00000016425	lrpprc	99	50.559	ENSCSEG00000003850	lrpprc	96	57.812	Cynoglossus_semilaevis
ENSPMEG00000016425	lrpprc	99	81.670	ENSCVAG00000012967	lrpprc	99	81.670	Cyprinodon_variegatus
ENSPMEG00000016425	lrpprc	99	57.722	ENSDARG00000043970	lrpprc	98	57.722	Danio_rerio
ENSPMEG00000016425	lrpprc	77	42.623	ENSDNOG00000032336	-	95	42.623	Dasypus_novemcinctus
ENSPMEG00000016425	lrpprc	99	51.130	ENSDNOG00000012594	-	99	51.130	Dasypus_novemcinctus
ENSPMEG00000016425	lrpprc	99	50.141	ENSDORG00000012233	Lrpprc	99	50.459	Dipodomys_ordii
ENSPMEG00000016425	lrpprc	99	50.880	ENSETEG00000006657	LRPPRC	99	51.125	Echinops_telfairi
ENSPMEG00000016425	lrpprc	72	54.613	ENSEEUG00000012340	LRPPRC	79	54.613	Erinaceus_europaeus
ENSPMEG00000016425	lrpprc	96	58.266	ENSELUG00000012803	lrpprc	99	58.266	Esox_lucius
ENSPMEG00000016425	lrpprc	99	51.237	ENSFCAG00000013468	LRPPRC	99	51.410	Felis_catus
ENSPMEG00000016425	lrpprc	94	50.263	ENSFALG00000012738	LRPPRC	98	50.263	Ficedula_albicollis
ENSPMEG00000016425	lrpprc	99	48.317	ENSFDAG00000015328	LRPPRC	99	48.317	Fukomys_damarensis
ENSPMEG00000016425	lrpprc	99	78.344	ENSFHEG00000019604	lrpprc	99	78.344	Fundulus_heteroclitus
ENSPMEG00000016425	lrpprc	99	62.120	ENSGMOG00000008337	lrpprc	99	62.120	Gadus_morhua
ENSPMEG00000016425	lrpprc	100	90.247	ENSGAFG00000001455	lrpprc	100	90.247	Gambusia_affinis
ENSPMEG00000016425	lrpprc	99	68.927	ENSGACG00000010679	lrpprc	99	71.090	Gasterosteus_aculeatus
ENSPMEG00000016425	lrpprc	100	75.615	ENSHBUG00000000393	lrpprc	98	75.615	Haplochromis_burtoni
ENSPMEG00000016425	lrpprc	99	47.997	ENSHGLG00000006123	LRPPRC	99	47.997	Heterocephalus_glaber_female
ENSPMEG00000016425	lrpprc	59	47.255	ENSHGLG00100005960	-	99	47.255	Heterocephalus_glaber_male
ENSPMEG00000016425	lrpprc	98	70.376	ENSHCOG00000002107	lrpprc	100	70.376	Hippocampus_comes
ENSPMEG00000016425	lrpprc	99	61.641	ENSIPUG00000009406	lrpprc	99	61.641	Ictalurus_punctatus
ENSPMEG00000016425	lrpprc	95	51.261	ENSSTOG00000011185	LRPPRC	99	50.141	Ictidomys_tridecemlineatus
ENSPMEG00000016425	lrpprc	95	51.001	ENSJJAG00000020475	Lrpprc	100	49.965	Jaculus_jaculus
ENSPMEG00000016425	lrpprc	99	66.308	ENSKMAG00000003287	lrpprc	85	66.308	Kryptolebias_marmoratus
ENSPMEG00000016425	lrpprc	99	62.561	ENSLBEG00000023225	lrpprc	96	71.012	Labrus_bergylta
ENSPMEG00000016425	lrpprc	99	57.612	ENSLACG00000014030	LRPPRC	99	57.612	Latimeria_chalumnae
ENSPMEG00000016425	lrpprc	99	60.712	ENSLOCG00000016390	lrpprc	97	60.712	Lepisosteus_oculatus
ENSPMEG00000016425	lrpprc	99	49.230	ENSLAFG00000008614	LRPPRC	99	49.370	Loxodonta_africana
ENSPMEG00000016425	lrpprc	95	51.265	ENSMFAG00000041560	LRPPRC	99	55.700	Macaca_fascicularis
ENSPMEG00000016425	lrpprc	95	50.558	ENSMMUG00000019841	LRPPRC	99	54.921	Macaca_mulatta
ENSPMEG00000016425	lrpprc	99	49.753	ENSMNEG00000031613	LRPPRC	97	54.393	Macaca_nemestrina
ENSPMEG00000016425	lrpprc	98	63.098	ENSMAMG00000021835	lrpprc	98	62.979	Mastacembelus_armatus
ENSPMEG00000016425	lrpprc	100	75.685	ENSMZEG00005027379	lrpprc	99	75.685	Maylandia_zebra
ENSPMEG00000016425	lrpprc	99	49.646	ENSMAUG00000012118	Lrpprc	99	50.112	Mesocricetus_auratus
ENSPMEG00000016425	lrpprc	99	50.635	ENSMICG00000010486	LRPPRC	97	54.307	Microcebus_murinus
ENSPMEG00000016425	lrpprc	99	50.494	ENSMOCG00000006048	Lrpprc	99	50.494	Microtus_ochrogaster
ENSPMEG00000016425	lrpprc	99	66.028	ENSMMOG00000007830	lrpprc	94	75.538	Mola_mola
ENSPMEG00000016425	lrpprc	95	50.589	ENSMODG00000000648	LRPPRC	99	50.589	Monodelphis_domestica
ENSPMEG00000016425	lrpprc	100	68.243	ENSMALG00000001271	lrpprc	99	68.172	Monopterus_albus
ENSPMEG00000016425	lrpprc	99	50.529	ENSMPUG00000011800	LRPPRC	100	52.571	Mustela_putorius_furo
ENSPMEG00000016425	lrpprc	99	50.635	ENSMLUG00000010575	LRPPRC	99	50.914	Myotis_lucifugus
ENSPMEG00000016425	lrpprc	99	49.611	ENSNGAG00000013069	Lrpprc	99	49.682	Nannospalax_galili
ENSPMEG00000016425	lrpprc	94	67.841	ENSNBRG00000013202	lrpprc	92	76.956	Neolamprologus_brichardi
ENSPMEG00000016425	lrpprc	99	49.930	ENSNLEG00000016782	LRPPRC	96	55.204	Nomascus_leucogenys
ENSPMEG00000016425	lrpprc	87	56.667	ENSOPRG00000016774	LRPPRC	92	45.232	Ochotona_princeps
ENSPMEG00000016425	lrpprc	99	49.364	ENSODEG00000011211	LRPPRC	99	49.366	Octodon_degus
ENSPMEG00000016425	lrpprc	100	75.246	ENSONIG00000000917	lrpprc	99	74.610	Oreochromis_niloticus
ENSPMEG00000016425	lrpprc	74	46.831	ENSOANG00000014670	-	100	46.831	Ornithorhynchus_anatinus
ENSPMEG00000016425	lrpprc	99	50.775	ENSOCUG00000015046	LRPPRC	95	50.950	Oryctolagus_cuniculus
ENSPMEG00000016425	lrpprc	99	69.873	ENSORLG00000004605	lrpprc	96	69.823	Oryzias_latipes
ENSPMEG00000016425	lrpprc	91	73.416	ENSORLG00020012536	lrpprc	99	73.243	Oryzias_latipes_hni
ENSPMEG00000016425	lrpprc	99	67.870	ENSORLG00015018270	lrpprc	99	67.657	Oryzias_latipes_hsok
ENSPMEG00000016425	lrpprc	99	50.175	ENSOGAG00000012798	LRPPRC	100	50.315	Otolemur_garnettii
ENSPMEG00000016425	lrpprc	95	51.896	ENSOARG00000006522	LRPPRC	99	50.812	Ovis_aries
ENSPMEG00000016425	lrpprc	95	50.371	ENSPPAG00000040876	LRPPRC	97	54.376	Pan_paniscus
ENSPMEG00000016425	lrpprc	99	51.059	ENSPPRG00000006578	LRPPRC	99	51.059	Panthera_pardus
ENSPMEG00000016425	lrpprc	95	52.494	ENSPTIG00000000933	LRPPRC	96	52.494	Panthera_tigris_altaica
ENSPMEG00000016425	lrpprc	99	50.106	ENSPTRG00000011880	LRPPRC	97	54.766	Pan_troglodytes
ENSPMEG00000016425	lrpprc	95	51.154	ENSPANG00000020731	LRPPRC	97	54.393	Papio_anubis
ENSPMEG00000016425	lrpprc	95	48.167	ENSPKIG00000022232	lrpprc	97	57.558	Paramormyrops_kingsleyae
ENSPMEG00000016425	lrpprc	61	54.514	ENSPSIG00000006830	-	98	54.514	Pelodiscus_sinensis
ENSPMEG00000016425	lrpprc	66	60.577	ENSPMGG00000016597	lrpprc	96	60.577	Periophthalmus_magnuspinnatus
ENSPMEG00000016425	lrpprc	93	46.305	ENSPMAG00000002147	lrpprc	99	46.305	Petromyzon_marinus
ENSPMEG00000016425	lrpprc	100	99.504	ENSPFOG00000011227	lrpprc	100	99.504	Poecilia_formosa
ENSPMEG00000016425	lrpprc	100	98.725	ENSPLAG00000004018	lrpprc	100	98.725	Poecilia_latipinna
ENSPMEG00000016425	lrpprc	100	96.671	ENSPREG00000003662	lrpprc	100	96.671	Poecilia_reticulata
ENSPMEG00000016425	lrpprc	57	47.453	ENSPPYG00000029532	-	99	47.453	Pongo_abelii
ENSPMEG00000016425	lrpprc	78	53.191	ENSPCAG00000001430	LRPPRC	84	50.510	Procavia_capensis
ENSPMEG00000016425	lrpprc	99	48.693	ENSPVAG00000002007	LRPPRC	99	48.870	Pteropus_vampyrus
ENSPMEG00000016425	lrpprc	100	66.573	ENSPNYG00000000756	lrpprc	90	77.660	Pundamilia_nyererei
ENSPMEG00000016425	lrpprc	99	64.025	ENSPNAG00000002895	lrpprc	99	64.025	Pygocentrus_nattereri
ENSPMEG00000016425	lrpprc	99	49.646	ENSRNOG00000005877	Lrpprc	99	49.752	Rattus_norvegicus
ENSPMEG00000016425	lrpprc	99	49.015	ENSRBIG00000031552	LRPPRC	99	49.299	Rhinopithecus_bieti
ENSPMEG00000016425	lrpprc	99	50.424	ENSSBOG00000011807	LRPPRC	97	55.243	Saimiri_boliviensis_boliviensis
ENSPMEG00000016425	lrpprc	95	50.223	ENSSHAG00000018725	LRPPRC	99	50.223	Sarcophilus_harrisii
ENSPMEG00000016425	lrpprc	99	55.000	ENSSFOG00015001042	lrpprc	99	55.000	Scleropages_formosus
ENSPMEG00000016425	lrpprc	99	71.146	ENSSDUG00000019062	lrpprc	99	71.146	Seriola_dumerili
ENSPMEG00000016425	lrpprc	99	61.513	ENSSLDG00000023028	lrpprc	99	58.204	Seriola_lalandi_dorsalis
ENSPMEG00000016425	lrpprc	90	49.141	ENSSARG00000000426	LRPPRC	99	48.856	Sorex_araneus
ENSPMEG00000016425	lrpprc	99	64.951	ENSSPAG00000000162	lrpprc	99	64.951	Stegastes_partitus
ENSPMEG00000016425	lrpprc	99	50.706	ENSSSCG00000008452	LRPPRC	99	50.706	Sus_scrofa
ENSPMEG00000016425	lrpprc	93	49.547	ENSTGUG00000003759	LRPPRC	99	49.547	Taeniopygia_guttata
ENSPMEG00000016425	lrpprc	100	67.105	ENSTRUG00000008409	lrpprc	96	67.105	Takifugu_rubripes
ENSPMEG00000016425	lrpprc	99	65.797	ENSTNIG00000007470	lrpprc	99	66.420	Tetraodon_nigroviridis
ENSPMEG00000016425	lrpprc	99	49.190	ENSTTRG00000006403	LRPPRC	99	49.331	Tursiops_truncatus
ENSPMEG00000016425	lrpprc	95	49.442	ENSVPAG00000008993	LRPPRC	99	49.442	Vicugna_pacos
ENSPMEG00000016425	lrpprc	99	55.548	ENSXETG00000009296	lrpprc	99	55.548	Xenopus_tropicalis
ENSPMEG00000016425	lrpprc	99	79.786	ENSXCOG00000013343	lrpprc	97	81.071	Xiphophorus_couchianus
ENSPMEG00000016425	lrpprc	100	89.399	ENSXMAG00000018108	lrpprc	100	89.399	Xiphophorus_maculatus