EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMEG00000016462 (Gene tree)
Gene ID: 106919379
Gene Symbol: mrpl42
Alias: -
Full Name: mitochondrial ribosomal protein L42
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Plus strand
Length: 3181 bases
Position: chrKQ551339.1:198847-202027
Accession: 106919379
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000030209	MRP-S32	PF10210.9	6.5e-34	1	1
ENSPMEP00000014096	MRP-S32	PF10210.9	7.4e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000022016	-	1570	-	ENSPMEP00000014096	151 (aa)	-	-
ENSPMET00000032468	-	585	XM_014989682	ENSPMEP00000030209	145 (aa)	XP_014845168	UPI00072DE4F9

Gene Model

Click here to download ENSPMEG00000016462's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000016462's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000016462	mrpl42	100	76.712	ENSAPOG00000010677	mrpl42	100	76.712	Acanthochromis_polyacanthus
ENSPMEG00000016462	mrpl42	100	77.241	ENSAOCG00000011620	mrpl42	100	77.241	Amphiprion_ocellaris
ENSPMEG00000016462	mrpl42	100	77.241	ENSAPEG00000019516	mrpl42	100	77.241	Amphiprion_percula
ENSPMEG00000016462	mrpl42	90	75.573	ENSATEG00000014106	mrpl42	100	75.573	Anabas_testudineus
ENSPMEG00000016462	mrpl42	85	55.385	ENSACAG00000012606	MRPL42	88	55.385	Anolis_carolinensis
ENSPMEG00000016462	mrpl42	100	73.793	ENSACLG00000026856	mrpl42	100	73.793	Astatotilapia_calliptera
ENSPMEG00000016462	mrpl42	81	45.255	ENSAMXG00000035149	mrpl42	100	45.255	Astyanax_mexicanus
ENSPMEG00000016462	mrpl42	99	64.336	ENSCSEG00000010067	mrpl42	98	64.336	Cynoglossus_semilaevis
ENSPMEG00000016462	mrpl42	100	85.517	ENSCVAG00000002612	mrpl42	100	85.517	Cyprinodon_variegatus
ENSPMEG00000016462	mrpl42	100	54.483	ENSDARG00000079391	mrpl42	100	54.483	Danio_rerio
ENSPMEG00000016462	mrpl42	72	47.273	ENSEBUG00000005581	mrpl42	82	47.273	Eptatretus_burgeri
ENSPMEG00000016462	mrpl42	99	61.111	ENSELUG00000001973	mrpl42	99	61.111	Esox_lucius
ENSPMEG00000016462	mrpl42	100	81.379	ENSFHEG00000018696	mrpl42	100	81.379	Fundulus_heteroclitus
ENSPMEG00000016462	mrpl42	67	82.474	ENSGMOG00000002972	mrpl42	100	82.474	Gadus_morhua
ENSPMEG00000016462	mrpl42	100	95.172	ENSGAFG00000018373	mrpl42	100	95.172	Gambusia_affinis
ENSPMEG00000016462	mrpl42	66	82.292	ENSGACG00000018811	mrpl42	99	82.292	Gasterosteus_aculeatus
ENSPMEG00000016462	mrpl42	100	73.793	ENSHBUG00000015960	mrpl42	100	73.793	Haplochromis_burtoni
ENSPMEG00000016462	mrpl42	100	63.946	ENSHCOG00000014046	mrpl42	100	63.946	Hippocampus_comes
ENSPMEG00000016462	mrpl42	68	59.596	ENSIPUG00000015395	mrpl42	70	58.252	Ictalurus_punctatus
ENSPMEG00000016462	mrpl42	100	73.793	ENSKMAG00000013671	mrpl42	100	73.793	Kryptolebias_marmoratus
ENSPMEG00000016462	mrpl42	100	69.655	ENSLBEG00000028618	mrpl42	99	69.655	Labrus_bergylta
ENSPMEG00000016462	mrpl42	83	47.619	ENSLOCG00000015284	mrpl42	94	47.619	Lepisosteus_oculatus
ENSPMEG00000016462	mrpl42	100	78.621	ENSMAMG00000009737	mrpl42	100	78.621	Mastacembelus_armatus
ENSPMEG00000016462	mrpl42	100	73.793	ENSMZEG00005008545	mrpl42	96	73.793	Maylandia_zebra
ENSPMEG00000016462	mrpl42	83	64.167	ENSMMOG00000002317	mrpl42	79	64.167	Mola_mola
ENSPMEG00000016462	mrpl42	100	65.806	ENSMALG00000015794	mrpl42	96	65.806	Monopterus_albus
ENSPMEG00000016462	mrpl42	100	73.793	ENSNBRG00000003307	mrpl42	100	73.793	Neolamprologus_brichardi
ENSPMEG00000016462	mrpl42	100	73.793	ENSONIG00000011753	mrpl42	100	73.793	Oreochromis_niloticus
ENSPMEG00000016462	mrpl42	77	55.856	ENSOANG00000019984	-	75	55.856	Ornithorhynchus_anatinus
ENSPMEG00000016462	mrpl42	100	66.438	ENSORLG00000013500	mrpl42	85	66.438	Oryzias_latipes
ENSPMEG00000016462	mrpl42	100	69.863	ENSORLG00020000548	mrpl42	100	69.863	Oryzias_latipes_hni
ENSPMEG00000016462	mrpl42	100	65.517	ENSORLG00015016984	mrpl42	100	65.517	Oryzias_latipes_hsok
ENSPMEG00000016462	mrpl42	100	70.345	ENSOMEG00000010700	mrpl42	100	70.345	Oryzias_melastigma
ENSPMEG00000016462	mrpl42	100	61.224	ENSPKIG00000025457	mrpl42	100	61.224	Paramormyrops_kingsleyae
ENSPMEG00000016462	mrpl42	90	61.069	ENSPMGG00000019705	mrpl42	93	61.069	Periophthalmus_magnuspinnatus
ENSPMEG00000016462	mrpl42	90	48.120	ENSPMAG00000008091	mrpl42	82	48.120	Petromyzon_marinus
ENSPMEG00000016462	mrpl42	100	99.310	ENSPFOG00000016539	mrpl42	99	99.310	Poecilia_formosa
ENSPMEG00000016462	mrpl42	100	97.931	ENSPLAG00000001255	mrpl42	100	97.931	Poecilia_latipinna
ENSPMEG00000016462	mrpl42	94	81.618	ENSPREG00000012053	mrpl42	100	81.618	Poecilia_reticulata
ENSPMEG00000016462	mrpl42	100	73.793	ENSPNYG00000009586	mrpl42	100	73.793	Pundamilia_nyererei
ENSPMEG00000016462	mrpl42	69	60.000	ENSPNAG00000020753	mrpl42	71	58.252	Pygocentrus_nattereri
ENSPMEG00000016462	mrpl42	100	72.414	ENSSMAG00000000262	mrpl42	100	72.414	Scophthalmus_maximus
ENSPMEG00000016462	mrpl42	100	76.552	ENSSDUG00000005949	mrpl42	100	76.552	Seriola_dumerili
ENSPMEG00000016462	mrpl42	100	75.172	ENSSLDG00000010159	mrpl42	100	75.172	Seriola_lalandi_dorsalis
ENSPMEG00000016462	mrpl42	100	66.897	ENSTRUG00000025949	mrpl42	99	66.897	Takifugu_rubripes
ENSPMEG00000016462	mrpl42	79	57.391	ENSXETG00000032902	mrpl42	92	57.391	Xenopus_tropicalis
ENSPMEG00000016462	mrpl42	100	80.952	ENSXCOG00000013875	mrpl42	98	80.952	Xiphophorus_couchianus