EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMEG00000016502 (Gene tree)
Gene ID: 106927217
Gene Symbol: tdrkh
Alias: -
Full Name: tudor and KH domain containing
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Minus strand
Length: 13391 bases
Position: chrKQ551913.1:230036-243426
Accession: 106927217
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000014130	KH_1	PF00013.29	3.4e-17	1	1
ENSPMEP00000014140	KH_1	PF00013.29	3.4e-17	1	1
ENSPMEP00000014130	TUDOR	PF00567.24	1.1e-25	1	1
ENSPMEP00000014140	TUDOR	PF00567.24	1.1e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000022035	-	2361	-	ENSPMEP00000014140	545 (aa)	-	UPI0004442E37
ENSPMET00000022042	-	2260	XM_015002621	ENSPMEP00000014130	545 (aa)	XP_014858107	UPI0004442E37

Gene Model

Click here to download ENSPMEG00000016502's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000016502's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000016502	tdrkh	100	69.713	ENSAPOG00000012653	tdrkh	100	71.147	Acanthochromis_polyacanthus
ENSPMEG00000016502	tdrkh	97	69.346	ENSACIG00000010318	tdrkh	98	69.346	Amphilophus_citrinellus
ENSPMEG00000016502	tdrkh	100	70.430	ENSAOCG00000020623	tdrkh	100	71.864	Amphiprion_ocellaris
ENSPMEG00000016502	tdrkh	100	70.609	ENSAPEG00000018388	tdrkh	100	72.043	Amphiprion_percula
ENSPMEG00000016502	tdrkh	100	72.662	ENSATEG00000023809	tdrkh	100	72.662	Anabas_testudineus
ENSPMEG00000016502	tdrkh	100	69.078	ENSACLG00000003017	tdrkh	100	69.078	Astatotilapia_calliptera
ENSPMEG00000016502	tdrkh	99	59.431	ENSAMXG00000011664	tdrkh	94	59.431	Astyanax_mexicanus
ENSPMEG00000016502	tdrkh	100	64.209	ENSCSEG00000002894	tdrkh	99	64.388	Cynoglossus_semilaevis
ENSPMEG00000016502	tdrkh	61	86.765	ENSCVAG00000020347	tdrkh	76	86.765	Cyprinodon_variegatus
ENSPMEG00000016502	tdrkh	99	59.099	ENSDARG00000053474	tdrkh	94	59.099	Danio_rerio
ENSPMEG00000016502	tdrkh	100	62.721	ENSELUG00000024537	tdrkh	94	62.721	Esox_lucius
ENSPMEG00000016502	tdrkh	100	83.122	ENSFHEG00000003544	tdrkh	100	83.122	Fundulus_heteroclitus
ENSPMEG00000016502	tdrkh	100	62.749	ENSGMOG00000009304	tdrkh	94	62.749	Gadus_morhua
ENSPMEG00000016502	tdrkh	100	93.773	ENSGAFG00000010754	tdrkh	100	93.773	Gambusia_affinis
ENSPMEG00000016502	tdrkh	100	67.387	ENSGACG00000015258	tdrkh	94	67.986	Gasterosteus_aculeatus
ENSPMEG00000016502	tdrkh	100	69.078	ENSHBUG00000017609	tdrkh	100	69.078	Haplochromis_burtoni
ENSPMEG00000016502	tdrkh	99	59.541	ENSIPUG00000009673	tdrkh	99	59.541	Ictalurus_punctatus
ENSPMEG00000016502	tdrkh	100	70.450	ENSKMAG00000016638	tdrkh	93	70.811	Kryptolebias_marmoratus
ENSPMEG00000016502	tdrkh	100	71.712	ENSLBEG00000027323	tdrkh	97	71.712	Labrus_bergylta
ENSPMEG00000016502	tdrkh	98	51.439	ENSLOCG00000011381	tdrkh	97	51.439	Lepisosteus_oculatus
ENSPMEG00000016502	tdrkh	100	70.705	ENSMAMG00000020343	tdrkh	100	70.705	Mastacembelus_armatus
ENSPMEG00000016502	tdrkh	100	69.078	ENSMZEG00005006755	tdrkh	100	69.078	Maylandia_zebra
ENSPMEG00000016502	tdrkh	97	69.057	ENSMMOG00000020663	tdrkh	90	69.057	Mola_mola
ENSPMEG00000016502	tdrkh	100	69.245	ENSMALG00000015401	tdrkh	100	69.245	Monopterus_albus
ENSPMEG00000016502	tdrkh	100	66.546	ENSNBRG00000023815	tdrkh	100	66.546	Neolamprologus_brichardi
ENSPMEG00000016502	tdrkh	100	66.068	ENSORLG00000029204	tdrkh	99	66.068	Oryzias_latipes
ENSPMEG00000016502	tdrkh	96	64.516	ENSORLG00020016168	tdrkh	99	64.516	Oryzias_latipes_hni
ENSPMEG00000016502	tdrkh	97	65.226	ENSORLG00015014094	tdrkh	96	65.226	Oryzias_latipes_hsok
ENSPMEG00000016502	tdrkh	100	67.455	ENSOMEG00000015063	tdrkh	92	67.455	Oryzias_melastigma
ENSPMEG00000016502	tdrkh	100	54.497	ENSPKIG00000017597	tdrkh	100	54.497	Paramormyrops_kingsleyae
ENSPMEG00000016502	tdrkh	99	63.669	ENSPMGG00000019362	tdrkh	99	64.029	Periophthalmus_magnuspinnatus
ENSPMEG00000016502	tdrkh	100	100.000	ENSPFOG00000013032	tdrkh	94	100.000	Poecilia_formosa
ENSPMEG00000016502	tdrkh	100	99.450	ENSPLAG00000004193	tdrkh	100	99.450	Poecilia_latipinna
ENSPMEG00000016502	tdrkh	97	97.159	ENSPREG00000004213	tdrkh	94	93.407	Poecilia_reticulata
ENSPMEG00000016502	tdrkh	97	68.598	ENSPNYG00000022818	tdrkh	97	68.598	Pundamilia_nyererei
ENSPMEG00000016502	tdrkh	99	57.699	ENSPNAG00000008783	tdrkh	94	57.699	Pygocentrus_nattereri
ENSPMEG00000016502	tdrkh	98	53.285	ENSSFOG00015001048	tdrkh	97	54.212	Scleropages_formosus
ENSPMEG00000016502	tdrkh	100	70.789	ENSSMAG00000001532	tdrkh	100	70.968	Scophthalmus_maximus
ENSPMEG00000016502	tdrkh	100	72.824	ENSSDUG00000013393	tdrkh	100	73.002	Seriola_dumerili
ENSPMEG00000016502	tdrkh	100	73.179	ENSSLDG00000017418	tdrkh	100	73.357	Seriola_lalandi_dorsalis
ENSPMEG00000016502	tdrkh	100	71.634	ENSSPAG00000006435	tdrkh	95	73.070	Stegastes_partitus
ENSPMEG00000016502	tdrkh	97	65.981	ENSTRUG00000006644	tdrkh	97	65.981	Takifugu_rubripes
ENSPMEG00000016502	tdrkh	99	65.350	ENSTNIG00000003157	tdrkh	99	65.350	Tetraodon_nigroviridis
ENSPMEG00000016502	tdrkh	81	100.000	ENSXCOG00000016972	tdrkh	98	100.000	Xiphophorus_couchianus
ENSPMEG00000016502	tdrkh	100	92.308	ENSXMAG00000014756	tdrkh	100	92.308	Xiphophorus_maculatus