EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMEG00000016524 (Gene tree)
Gene ID: 106928616
Gene Symbol: -
Alias: -
Full Name: heterogeneous nuclear ribonucleoprotein C-like
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Plus strand
Length: 10713 bases
Position: chrKQ552024.1:82312-93024
Accession: 106928616
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000030240	RRM_1	PF00076.22	4.7e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000032489	-	2152	XM_015004982	ENSPMEP00000030240	320 (aa)	XP_014860468	UPI00072DBF6B

Gene Model

Click here to download ENSPMEG00000016524's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000016524's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMEG00000016524	-	87	76.408	ENSPMEG00000004802	-	82	77.953
ENSPMEG00000016524	-	67	58.590	ENSPMEG00000023847	ralyl	79	56.522
ENSPMEG00000016524	-	68	55.411	ENSPMEG00000013624	-	61	51.982

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000016524	-	66	57.277	ENSG00000184672	RALYL	91	77.922	Homo_sapiens
ENSPMEG00000016524	-	78	85.771	ENSAPOG00000006963	hnrnpc	81	81.423	Acanthochromis_polyacanthus
ENSPMEG00000016524	-	97	87.500	ENSACIG00000016568	-	99	87.013	Amphilophus_citrinellus
ENSPMEG00000016524	-	79	83.012	ENSACIG00000000270	-	82	82.870	Amphilophus_citrinellus
ENSPMEG00000016524	-	78	86.166	ENSAOCG00000003896	-	81	81.818	Amphiprion_ocellaris
ENSPMEG00000016524	-	100	86.957	ENSAOCG00000021616	-	100	87.578	Amphiprion_ocellaris
ENSPMEG00000016524	-	78	86.166	ENSAPEG00000001489	-	81	81.818	Amphiprion_percula
ENSPMEG00000016524	-	82	90.943	ENSAPEG00000019962	-	85	91.321	Amphiprion_percula
ENSPMEG00000016524	-	82	90.602	ENSATEG00000018006	-	100	85.627	Anabas_testudineus
ENSPMEG00000016524	-	79	84.436	ENSATEG00000011734	-	84	80.632	Anabas_testudineus
ENSPMEG00000016524	-	85	46.735	ENSAPLG00000015574	RALYL	75	55.204	Anas_platyrhynchos
ENSPMEG00000016524	-	66	55.111	ENSACAG00000028464	RALYL	74	55.656	Anolis_carolinensis
ENSPMEG00000016524	-	66	57.277	ENSANAG00000023383	RALYL	73	57.895	Aotus_nancymaae
ENSPMEG00000016524	-	82	88.390	ENSACLG00000005707	-	90	89.139	Astatotilapia_calliptera
ENSPMEG00000016524	-	80	78.764	ENSACLG00000013636	-	84	79.051	Astatotilapia_calliptera
ENSPMEG00000016524	-	78	80.237	ENSACLG00000000995	-	81	83.562	Astatotilapia_calliptera
ENSPMEG00000016524	-	88	63.958	ENSAMXG00000042946	hnrnpc	99	73.196	Astyanax_mexicanus
ENSPMEG00000016524	-	84	74.908	ENSAMXG00000034915	zgc:55733	86	75.200	Astyanax_mexicanus
ENSPMEG00000016524	-	66	57.277	ENSCJAG00000000402	RALYL	73	57.895	Callithrix_jacchus
ENSPMEG00000016524	-	65	55.405	ENSCPOG00000012314	RALYL	74	55.455	Cavia_porcellus
ENSPMEG00000016524	-	66	57.277	ENSCCAG00000025003	RALYL	75	77.922	Cebus_capucinus
ENSPMEG00000016524	-	66	57.277	ENSCATG00000042145	RALYL	73	57.895	Cercocebus_atys
ENSPMEG00000016524	-	66	54.911	ENSCLAG00000005228	RALYL	74	55.455	Chinchilla_lanigera
ENSPMEG00000016524	-	66	54.222	ENSCHOG00000013228	RALYL	74	52.489	Choloepus_hoffmanni
ENSPMEG00000016524	-	66	57.277	ENSCANG00000039144	RALYL	73	57.895	Colobus_angolensis_palliatus
ENSPMEG00000016524	-	66	54.667	ENSCGRG00001009241	Ralyl	74	54.751	Cricetulus_griseus_chok1gshd
ENSPMEG00000016524	-	78	88.400	ENSCSEG00000021349	-	78	86.400	Cynoglossus_semilaevis
ENSPMEG00000016524	-	69	76.339	ENSCSEG00000019769	-	74	74.091	Cynoglossus_semilaevis
ENSPMEG00000016524	-	100	95.988	ENSCVAG00000016981	-	100	95.988	Cyprinodon_variegatus
ENSPMEG00000016524	-	86	64.769	ENSCVAG00000002797	-	85	65.748	Cyprinodon_variegatus
ENSPMEG00000016524	-	82	77.186	ENSDARG00000103845	zgc:55733	90	74.699	Danio_rerio
ENSPMEG00000016524	-	76	81.301	ENSDARG00000053810	hnrnpc	96	72.816	Danio_rerio
ENSPMEG00000016524	-	66	55.556	ENSDORG00000003721	Ralyl	74	55.656	Dipodomys_ordii
ENSPMEG00000016524	-	51	56.647	ENSETEG00000014028	RALYL	81	60.377	Echinops_telfairi
ENSPMEG00000016524	-	65	49.537	ENSEBUG00000006049	RALYL	73	47.196	Eptatretus_burgeri
ENSPMEG00000016524	-	93	39.617	ENSEBUG00000012363	hnrnpc	69	44.130	Eptatretus_burgeri
ENSPMEG00000016524	-	66	55.111	ENSEEUG00000007202	RALYL	76	55.455	Erinaceus_europaeus
ENSPMEG00000016524	-	77	78.409	ENSELUG00000007714	-	88	75.479	Esox_lucius
ENSPMEG00000016524	-	82	78.676	ENSELUG00000004132	-	99	73.718	Esox_lucius
ENSPMEG00000016524	-	66	58.140	ENSFALG00000008647	RALYL	96	58.294	Ficedula_albicollis
ENSPMEG00000016524	-	97	86.154	ENSFHEG00000007278	-	99	85.981	Fundulus_heteroclitus
ENSPMEG00000016524	-	88	74.394	ENSFHEG00000003605	-	83	75.197	Fundulus_heteroclitus
ENSPMEG00000016524	-	65	58.216	ENSGALG00000036938	RALYL	74	55.204	Gallus_gallus
ENSPMEG00000016524	-	97	98.387	ENSGAFG00000020992	-	100	98.387	Gambusia_affinis
ENSPMEG00000016524	-	87	74.296	ENSGAFG00000020486	-	80	78.241	Gambusia_affinis
ENSPMEG00000016524	-	68	72.768	ENSGACG00000018932	-	85	67.273	Gasterosteus_aculeatus
ENSPMEG00000016524	-	100	78.012	ENSGACG00000017772	-	96	88.755	Gasterosteus_aculeatus
ENSPMEG00000016524	-	66	57.277	ENSGGOG00000000841	RALYL	73	57.895	Gorilla_gorilla
ENSPMEG00000016524	-	78	80.632	ENSHBUG00000018342	-	82	79.842	Haplochromis_burtoni
ENSPMEG00000016524	-	100	85.494	ENSHBUG00000010527	-	100	84.259	Haplochromis_burtoni
ENSPMEG00000016524	-	66	54.464	ENSHGLG00000004866	RALYL	74	55.000	Heterocephalus_glaber_female
ENSPMEG00000016524	-	66	54.464	ENSHGLG00100017480	RALYL	74	55.000	Heterocephalus_glaber_male
ENSPMEG00000016524	-	81	77.206	ENSHCOG00000012333	hnrnpc	91	82.671	Hippocampus_comes
ENSPMEG00000016524	-	80	79.845	ENSIPUG00000011271	hnrnpc	99	78.070	Ictalurus_punctatus
ENSPMEG00000016524	-	91	72.945	ENSIPUG00000008666	zgc:55733	99	74.783	Ictalurus_punctatus
ENSPMEG00000016524	-	66	55.111	ENSSTOG00000012583	RALYL	76	55.204	Ictidomys_tridecemlineatus
ENSPMEG00000016524	-	86	77.419	ENSKMAG00000011170	-	81	78.656	Kryptolebias_marmoratus
ENSPMEG00000016524	-	100	88.235	ENSKMAG00000018265	-	100	90.712	Kryptolebias_marmoratus
ENSPMEG00000016524	-	96	70.370	ENSLBEG00000024418	-	84	72.868	Labrus_bergylta
ENSPMEG00000016524	-	100	81.308	ENSLBEG00000006193	-	100	84.112	Labrus_bergylta
ENSPMEG00000016524	-	95	72.669	ENSLBEG00000006979	-	85	76.305	Labrus_bergylta
ENSPMEG00000016524	-	81	70.522	ENSLOCG00000002560	hnrnpc	88	68.992	Lepisosteus_oculatus
ENSPMEG00000016524	-	66	57.277	ENSMNEG00000033288	RALYL	73	57.895	Macaca_nemestrina
ENSPMEG00000016524	-	66	57.277	ENSMLEG00000038284	RALYL	73	57.895	Mandrillus_leucophaeus
ENSPMEG00000016524	-	78	84.980	ENSMAMG00000012236	-	84	79.365	Mastacembelus_armatus
ENSPMEG00000016524	-	100	83.282	ENSMAMG00000008033	-	100	84.830	Mastacembelus_armatus
ENSPMEG00000016524	-	100	85.494	ENSMZEG00005024249	-	100	84.259	Maylandia_zebra
ENSPMEG00000016524	-	78	80.237	ENSMZEG00005020460	-	87	78.125	Maylandia_zebra
ENSPMEG00000016524	-	66	54.667	ENSMAUG00000015149	Ralyl	74	54.751	Mesocricetus_auratus
ENSPMEG00000016524	-	65	57.075	ENSMICG00000005558	RALYL	78	77.922	Microcebus_murinus
ENSPMEG00000016524	-	65	55.157	ENSMOCG00000017371	Ralyl	74	54.751	Microtus_ochrogaster
ENSPMEG00000016524	-	90	87.713	ENSMMOG00000019520	-	100	85.274	Mola_mola
ENSPMEG00000016524	-	86	78.417	ENSMMOG00000021465	-	88	80.556	Mola_mola
ENSPMEG00000016524	-	82	86.038	ENSMALG00000014623	-	84	86.792	Monopterus_albus
ENSPMEG00000016524	-	79	73.725	ENSMALG00000007520	-	83	72.112	Monopterus_albus
ENSPMEG00000016524	-	66	54.667	ENSMUSG00000039717	Ralyl	91	76.623	Mus_musculus
ENSPMEG00000016524	-	65	56.951	ENSMPUG00000010724	RALYL	74	54.751	Mustela_putorius_furo
ENSPMEG00000016524	-	66	54.667	ENSNGAG00000013375	Ralyl	74	54.751	Nannospalax_galili
ENSPMEG00000016524	-	100	84.259	ENSNBRG00000015676	-	100	85.185	Neolamprologus_brichardi
ENSPMEG00000016524	-	79	81.008	ENSNBRG00000004912	-	92	78.571	Neolamprologus_brichardi
ENSPMEG00000016524	-	66	57.277	ENSNLEG00000002702	RALYL	70	57.895	Nomascus_leucogenys
ENSPMEG00000016524	-	56	50.521	ENSOPRG00000013650	-	98	47.895	Ochotona_princeps
ENSPMEG00000016524	-	66	54.464	ENSODEG00000001012	RALYL	74	55.000	Octodon_degus
ENSPMEG00000016524	-	100	85.802	ENSONIG00000018350	-	100	83.951	Oreochromis_niloticus
ENSPMEG00000016524	-	78	81.423	ENSONIG00000007859	-	90	80.843	Oreochromis_niloticus
ENSPMEG00000016524	-	78	72.549	ENSORLG00000009999	-	82	70.980	Oryzias_latipes
ENSPMEG00000016524	-	100	86.269	ENSORLG00000003144	-	100	85.970	Oryzias_latipes
ENSPMEG00000016524	-	78	72.157	ENSORLG00020018228	hnrnpc	82	70.588	Oryzias_latipes_hni
ENSPMEG00000016524	-	100	85.460	ENSORLG00015009460	-	100	85.757	Oryzias_latipes_hsok
ENSPMEG00000016524	-	78	72.549	ENSORLG00015019755	-	82	70.980	Oryzias_latipes_hsok
ENSPMEG00000016524	-	78	74.118	ENSOMEG00000020488	-	81	72.157	Oryzias_melastigma
ENSPMEG00000016524	-	100	89.198	ENSOMEG00000022665	-	100	88.580	Oryzias_melastigma
ENSPMEG00000016524	-	66	57.277	ENSPPAG00000038705	RALYL	73	57.895	Pan_paniscus
ENSPMEG00000016524	-	65	60.094	ENSPPRG00000018612	RALYL	73	57.820	Panthera_pardus
ENSPMEG00000016524	-	65	60.094	ENSPTIG00000020331	RALYL	73	57.820	Panthera_tigris_altaica
ENSPMEG00000016524	-	66	57.277	ENSPTRG00000020381	RALYL	73	57.895	Pan_troglodytes
ENSPMEG00000016524	-	66	57.277	ENSPANG00000029305	RALYL	73	57.895	Papio_anubis
ENSPMEG00000016524	-	99	72.308	ENSPKIG00000022837	-	96	77.143	Paramormyrops_kingsleyae
ENSPMEG00000016524	-	82	77.941	ENSPKIG00000008592	-	96	73.734	Paramormyrops_kingsleyae
ENSPMEG00000016524	-	66	55.111	ENSPSIG00000011135	RALYL	74	55.204	Pelodiscus_sinensis
ENSPMEG00000016524	-	69	87.783	ENSPMGG00000013144	-	98	65.574	Periophthalmus_magnuspinnatus
ENSPMEG00000016524	-	95	62.171	ENSPMGG00000017774	-	92	65.022	Periophthalmus_magnuspinnatus
ENSPMEG00000016524	-	66	54.667	ENSPEMG00000016447	Ralyl	74	54.751	Peromyscus_maniculatus_bairdii
ENSPMEG00000016524	-	66	54.867	ENSPMAG00000002407	RALYL	96	54.054	Petromyzon_marinus
ENSPMEG00000016524	-	100	99.375	ENSPFOG00000002643	-	100	99.375	Poecilia_formosa
ENSPMEG00000016524	-	87	75.265	ENSPFOG00000001583	-	82	77.953	Poecilia_formosa
ENSPMEG00000016524	-	100	99.065	ENSPLAG00000000061	-	100	99.065	Poecilia_latipinna
ENSPMEG00000016524	-	87	73.759	ENSPLAG00000015305	-	82	76.285	Poecilia_latipinna
ENSPMEG00000016524	-	78	77.165	ENSPREG00000007928	-	82	76.378	Poecilia_reticulata
ENSPMEG00000016524	-	90	97.578	ENSPREG00000001852	-	97	97.578	Poecilia_reticulata
ENSPMEG00000016524	-	69	52.542	ENSPVAG00000010821	RALYL	78	53.017	Pteropus_vampyrus
ENSPMEG00000016524	-	98	75.238	ENSPNYG00000003747	-	90	89.139	Pundamilia_nyererei
ENSPMEG00000016524	-	79	81.395	ENSPNYG00000020293	-	86	79.447	Pundamilia_nyererei
ENSPMEG00000016524	-	77	80.567	ENSPNAG00000015686	hnrnpc	89	78.113	Pygocentrus_nattereri
ENSPMEG00000016524	-	82	73.606	ENSPNAG00000019200	zgc:55733	81	74.118	Pygocentrus_nattereri
ENSPMEG00000016524	-	66	57.277	ENSRROG00000023925	RALYL	78	77.922	Rhinopithecus_roxellana
ENSPMEG00000016524	-	87	75.517	ENSSFOG00015012924	-	82	96.296	Scleropages_formosus
ENSPMEG00000016524	-	82	75.277	ENSSFOG00015012015	-	81	84.038	Scleropages_formosus
ENSPMEG00000016524	-	100	79.630	ENSSMAG00000011147	-	96	82.903	Scophthalmus_maximus
ENSPMEG00000016524	-	77	83.133	ENSSMAG00000013592	-	95	73.377	Scophthalmus_maximus
ENSPMEG00000016524	-	87	80.565	ENSSDUG00000001723	-	81	81.423	Seriola_dumerili
ENSPMEG00000016524	-	100	85.404	ENSSDUG00000006730	-	100	81.677	Seriola_dumerili
ENSPMEG00000016524	-	82	89.434	ENSSLDG00000007474	-	92	86.792	Seriola_lalandi_dorsalis
ENSPMEG00000016524	-	84	82.117	ENSSLDG00000007454	-	82	81.818	Seriola_lalandi_dorsalis
ENSPMEG00000016524	-	86	82.079	ENSSPAG00000023204	-	81	82.213	Stegastes_partitus
ENSPMEG00000016524	-	100	87.227	ENSSPAG00000013996	-	100	88.162	Stegastes_partitus
ENSPMEG00000016524	-	85	46.735	ENSTGUG00000011689	RALYL	79	53.913	Taeniopygia_guttata
ENSPMEG00000016524	-	82	78.788	ENSTRUG00000020158	-	82	76.494	Takifugu_rubripes
ENSPMEG00000016524	-	79	78.378	ENSTNIG00000007427	-	83	78.431	Tetraodon_nigroviridis
ENSPMEG00000016524	-	78	79.051	ENSTNIG00000000334	-	93	77.344	Tetraodon_nigroviridis
ENSPMEG00000016524	-	66	49.123	ENSTBEG00000005551	RALYL	86	50.228	Tupaia_belangeri
ENSPMEG00000016524	-	66	53.636	ENSTTRG00000015762	RALYL	74	53.953	Tursiops_truncatus
ENSPMEG00000016524	-	65	54.245	ENSVPAG00000008501	RALYL	74	53.081	Vicugna_pacos
ENSPMEG00000016524	-	85	69.424	ENSXCOG00000006552	-	81	70.866	Xiphophorus_couchianus
ENSPMEG00000016524	-	87	75.704	ENSXMAG00000009333	-	82	75.984	Xiphophorus_maculatus
ENSPMEG00000016524	-	90	97.232	ENSXMAG00000022849	-	95	97.232	Xiphophorus_maculatus