EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMEG00000016698 (Gene tree)
Gene ID: 106917432
Gene Symbol: prdm12b
Alias: -
Full Name: PR/SET domain 12
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Minus strand
Length: 6680 bases
Position: chrKQ551237.1:624467-631146
Accession: 106917432
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000030350	zf-C2H2	PF00096.26	8.3e-13	1	2
ENSPMEP00000030350	zf-C2H2	PF00096.26	8.3e-13	2	2
ENSPMEP00000030350	zf-met	PF12874.7	8e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000022259	-	1107	XM_014986400	ENSPMEP00000030350	368 (aa)	XP_014841886	-

Gene Model

Click here to download ENSPMEG00000016698's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000016698's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMEG00000016698	prdm12b	68	42.105	ENSPMEG00000018002	prdm5	95	41.176

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000016698	prdm12b	89	82.371	ENSG00000130711	PRDM12	97	76.630	Homo_sapiens
ENSPMEG00000016698	prdm12b	99	87.798	ENSAPOG00000016051	prdm12b	96	87.268	Acanthochromis_polyacanthus
ENSPMEG00000016698	prdm12b	97	65.840	ENSAPOG00000018234	-	94	65.840	Acanthochromis_polyacanthus
ENSPMEG00000016698	prdm12b	88	81.677	ENSAMEG00000016234	PRDM12	97	81.988	Ailuropoda_melanoleuca
ENSPMEG00000016698	prdm12b	99	77.368	ENSACIG00000005193	-	97	77.105	Amphilophus_citrinellus
ENSPMEG00000016698	prdm12b	99	88.108	ENSACIG00000019578	prdm12b	96	88.108	Amphilophus_citrinellus
ENSPMEG00000016698	prdm12b	99	89.459	ENSAOCG00000015040	prdm12b	96	88.919	Amphiprion_ocellaris
ENSPMEG00000016698	prdm12b	99	89.918	ENSAPEG00000015092	prdm12b	96	89.918	Amphiprion_percula
ENSPMEG00000016698	prdm12b	97	76.087	ENSAPEG00000022849	-	95	76.087	Amphiprion_percula
ENSPMEG00000016698	prdm12b	99	78.667	ENSATEG00000014595	-	94	83.436	Anabas_testudineus
ENSPMEG00000016698	prdm12b	92	81.009	ENSANAG00000020616	PRDM12	95	82.371	Aotus_nancymaae
ENSPMEG00000016698	prdm12b	99	77.083	ENSACLG00000007631	-	97	75.979	Astatotilapia_calliptera
ENSPMEG00000016698	prdm12b	99	86.027	ENSACLG00000011876	prdm12b	96	84.932	Astatotilapia_calliptera
ENSPMEG00000016698	prdm12b	99	81.644	ENSAMXG00000033665	prdm12b	96	81.148	Astyanax_mexicanus
ENSPMEG00000016698	prdm12b	100	80.163	ENSAMXG00000008540	PRDM12	97	79.076	Astyanax_mexicanus
ENSPMEG00000016698	prdm12b	89	82.067	ENSBTAG00000023797	PRDM12	89	82.067	Bos_taurus
ENSPMEG00000016698	prdm12b	89	82.371	ENSCJAG00000020540	PRDM12	89	82.067	Callithrix_jacchus
ENSPMEG00000016698	prdm12b	80	83.446	ENSCAFG00000023076	PRDM12	99	77.313	Canis_familiaris
ENSPMEG00000016698	prdm12b	89	82.371	ENSCAFG00020024046	PRDM12	97	76.902	Canis_lupus_dingo
ENSPMEG00000016698	prdm12b	89	82.371	ENSCHIG00000025005	PRDM12	97	76.359	Capra_hircus
ENSPMEG00000016698	prdm12b	93	77.193	ENSCPOG00000005901	PRDM12	92	82.581	Cavia_porcellus
ENSPMEG00000016698	prdm12b	89	82.371	ENSCCAG00000037485	PRDM12	97	76.630	Cebus_capucinus
ENSPMEG00000016698	prdm12b	89	82.371	ENSCATG00000020327	PRDM12	97	76.630	Cercocebus_atys
ENSPMEG00000016698	prdm12b	89	82.209	ENSCLAG00000005499	PRDM12	87	82.209	Chinchilla_lanigera
ENSPMEG00000016698	prdm12b	89	82.371	ENSCSAG00000014756	PRDM12	97	76.630	Chlorocebus_sabaeus
ENSPMEG00000016698	prdm12b	100	78.167	ENSCPBG00000022628	PRDM12	97	77.358	Chrysemys_picta_bellii
ENSPMEG00000016698	prdm12b	89	82.067	ENSCGRG00001015005	Prdm12	97	76.630	Cricetulus_griseus_chok1gshd
ENSPMEG00000016698	prdm12b	99	93.733	ENSCVAG00000017166	prdm12b	96	92.916	Cyprinodon_variegatus
ENSPMEG00000016698	prdm12b	97	79.515	ENSCVAG00000000944	-	96	79.515	Cyprinodon_variegatus
ENSPMEG00000016698	prdm12b	100	81.301	ENSDARG00000007430	prdm12b	98	80.759	Danio_rerio
ENSPMEG00000016698	prdm12b	89	81.571	ENSDNOG00000042302	PRDM12	90	81.571	Dasypus_novemcinctus
ENSPMEG00000016698	prdm12b	85	66.567	ENSEBUG00000016780	prdm12b	74	67.560	Eptatretus_burgeri
ENSPMEG00000016698	prdm12b	93	79.883	ENSEASG00005008472	PRDM12	97	76.359	Equus_asinus_asinus
ENSPMEG00000016698	prdm12b	93	79.883	ENSECAG00000005933	PRDM12	88	82.822	Equus_caballus
ENSPMEG00000016698	prdm12b	100	80.054	ENSELUG00000009905	prdm12b	98	79.784	Esox_lucius
ENSPMEG00000016698	prdm12b	99	80.220	ENSELUG00000013674	PRDM12	96	80.697	Esox_lucius
ENSPMEG00000016698	prdm12b	89	82.371	ENSFCAG00000043086	PRDM12	97	76.902	Felis_catus
ENSPMEG00000016698	prdm12b	100	78.976	ENSFALG00000001445	PRDM12	87	77.898	Ficedula_albicollis
ENSPMEG00000016698	prdm12b	97	78.474	ENSFHEG00000007746	-	93	78.474	Fundulus_heteroclitus
ENSPMEG00000016698	prdm12b	99	93.243	ENSFHEG00000003944	prdm12b	97	92.432	Fundulus_heteroclitus
ENSPMEG00000016698	prdm12b	100	81.250	ENSGMOG00000011797	prdm12b	98	81.941	Gadus_morhua
ENSPMEG00000016698	prdm12b	100	78.976	ENSGALG00000003895	PRDM12	97	77.898	Gallus_gallus
ENSPMEG00000016698	prdm12b	99	98.352	ENSGAFG00000010827	prdm12b	96	98.352	Gambusia_affinis
ENSPMEG00000016698	prdm12b	99	88.315	ENSGACG00000016713	prdm12b	96	87.500	Gasterosteus_aculeatus
ENSPMEG00000016698	prdm12b	100	78.167	ENSGAGG00000014083	PRDM12	97	77.358	Gopherus_agassizii
ENSPMEG00000016698	prdm12b	89	82.067	ENSGGOG00000010568	PRDM12	97	76.359	Gorilla_gorilla
ENSPMEG00000016698	prdm12b	99	87.772	ENSHBUG00000022878	prdm12b	96	88.587	Haplochromis_burtoni
ENSPMEG00000016698	prdm12b	99	77.083	ENSHBUG00000022537	-	90	75.979	Haplochromis_burtoni
ENSPMEG00000016698	prdm12b	89	82.515	ENSHGLG00000013939	PRDM12	97	76.087	Heterocephalus_glaber_female
ENSPMEG00000016698	prdm12b	86	85.714	ENSHCOG00000003663	prdm12b	96	81.365	Hippocampus_comes
ENSPMEG00000016698	prdm12b	98	74.309	ENSHCOG00000021167	-	94	73.481	Hippocampus_comes
ENSPMEG00000016698	prdm12b	99	82.645	ENSIPUG00000017053	prdm12b	96	81.967	Ictalurus_punctatus
ENSPMEG00000016698	prdm12b	99	78.082	ENSIPUG00000019544	PRDM12	96	78.082	Ictalurus_punctatus
ENSPMEG00000016698	prdm12b	95	79.310	ENSSTOG00000005986	PRDM12	84	82.371	Ictidomys_tridecemlineatus
ENSPMEG00000016698	prdm12b	89	82.822	ENSJJAG00000005424	Prdm12	97	82.822	Jaculus_jaculus
ENSPMEG00000016698	prdm12b	96	77.437	ENSKMAG00000021205	-	93	77.159	Kryptolebias_marmoratus
ENSPMEG00000016698	prdm12b	99	82.821	ENSKMAG00000016921	prdm12b	97	84.615	Kryptolebias_marmoratus
ENSPMEG00000016698	prdm12b	99	78.649	ENSLBEG00000007776	-	97	78.919	Labrus_bergylta
ENSPMEG00000016698	prdm12b	99	89.130	ENSLBEG00000017769	prdm12b	96	88.315	Labrus_bergylta
ENSPMEG00000016698	prdm12b	100	78.108	ENSLACG00000017560	PRDM12	97	76.486	Latimeria_chalumnae
ENSPMEG00000016698	prdm12b	100	79.245	ENSLOCG00000005429	prdm12b	97	79.515	Lepisosteus_oculatus
ENSPMEG00000016698	prdm12b	89	82.675	ENSLAFG00000006979	PRDM12	88	82.675	Loxodonta_africana
ENSPMEG00000016698	prdm12b	89	82.067	ENSMFAG00000040322	PRDM12	88	82.067	Macaca_fascicularis
ENSPMEG00000016698	prdm12b	89	82.371	ENSMNEG00000037234	PRDM12	97	76.630	Macaca_nemestrina
ENSPMEG00000016698	prdm12b	99	74.869	ENSMAMG00000018988	-	97	74.346	Mastacembelus_armatus
ENSPMEG00000016698	prdm12b	99	86.992	ENSMAMG00000013212	prdm12b	96	86.523	Mastacembelus_armatus
ENSPMEG00000016698	prdm12b	99	76.684	ENSMZEG00005000415	PRDM12	97	75.584	Maylandia_zebra
ENSPMEG00000016698	prdm12b	94	81.429	ENSMGAG00000005438	PRDM12	89	85.538	Meleagris_gallopavo
ENSPMEG00000016698	prdm12b	100	76.359	ENSMAUG00000013040	Prdm12	97	76.280	Mesocricetus_auratus
ENSPMEG00000016698	prdm12b	89	82.371	ENSMICG00000015480	PRDM12	89	82.371	Microcebus_murinus
ENSPMEG00000016698	prdm12b	95	79.202	ENSMOCG00000021026	Prdm12	88	82.371	Microtus_ochrogaster
ENSPMEG00000016698	prdm12b	100	77.989	ENSMODG00000012108	PRDM12	97	76.694	Monodelphis_domestica
ENSPMEG00000016698	prdm12b	87	82.716	ENSMALG00000021901	prdm12b	96	81.481	Monopterus_albus
ENSPMEG00000016698	prdm12b	89	82.067	MGP_CAROLIEiJ_G0023414	Prdm12	97	76.630	Mus_caroli
ENSPMEG00000016698	prdm12b	89	82.067	ENSMUSG00000079466	Prdm12	97	76.630	Mus_musculus
ENSPMEG00000016698	prdm12b	89	82.067	MGP_PahariEiJ_G0024871	Prdm12	97	76.630	Mus_pahari
ENSPMEG00000016698	prdm12b	89	82.067	MGP_SPRETEiJ_G0024331	Prdm12	97	76.630	Mus_spretus
ENSPMEG00000016698	prdm12b	88	83.230	ENSNGAG00000018480	Prdm12	97	75.543	Nannospalax_galili
ENSPMEG00000016698	prdm12b	99	72.460	ENSNBRG00000024312	-	96	72.460	Neolamprologus_brichardi
ENSPMEG00000016698	prdm12b	99	87.332	ENSNBRG00000006727	prdm12b	96	87.601	Neolamprologus_brichardi
ENSPMEG00000016698	prdm12b	100	69.565	ENSMEUG00000003828	PRDM12	97	68.293	Notamacropus_eugenii
ENSPMEG00000016698	prdm12b	89	82.822	ENSOPRG00000008680	PRDM12	97	82.822	Ochotona_princeps
ENSPMEG00000016698	prdm12b	92	80.882	ENSODEG00000016282	PRDM12	60	82.515	Octodon_degus
ENSPMEG00000016698	prdm12b	65	75.519	ENSOANG00000001043	PRDM12	100	73.859	Ornithorhynchus_anatinus
ENSPMEG00000016698	prdm12b	83	83.660	ENSOCUG00000008241	PRDM12	96	83.660	Oryctolagus_cuniculus
ENSPMEG00000016698	prdm12b	97	79.675	ENSORLG00000017558	-	95	79.133	Oryzias_latipes
ENSPMEG00000016698	prdm12b	99	85.829	ENSORLG00000007114	prdm12b	96	85.294	Oryzias_latipes
ENSPMEG00000016698	prdm12b	99	85.791	ENSORLG00020019565	prdm12b	96	85.829	Oryzias_latipes_hni
ENSPMEG00000016698	prdm12b	97	79.189	ENSORLG00020013167	-	95	78.919	Oryzias_latipes_hni
ENSPMEG00000016698	prdm12b	97	79.675	ENSORLG00015003435	-	95	79.133	Oryzias_latipes_hsok
ENSPMEG00000016698	prdm12b	99	84.718	ENSORLG00015007621	prdm12b	96	85.294	Oryzias_latipes_hsok
ENSPMEG00000016698	prdm12b	97	78.133	ENSOMEG00000007762	-	95	77.867	Oryzias_melastigma
ENSPMEG00000016698	prdm12b	99	84.881	ENSOMEG00000004134	prdm12b	96	85.411	Oryzias_melastigma
ENSPMEG00000016698	prdm12b	89	82.371	ENSOGAG00000007557	PRDM12	97	82.371	Otolemur_garnettii
ENSPMEG00000016698	prdm12b	77	81.338	ENSPPAG00000031506	-	96	80.000	Pan_paniscus
ENSPMEG00000016698	prdm12b	98	71.191	ENSPPRG00000023024	PRDM12	82	76.061	Panthera_pardus
ENSPMEG00000016698	prdm12b	89	82.371	ENSPTRG00000043324	-	97	76.630	Pan_troglodytes
ENSPMEG00000016698	prdm12b	89	82.371	ENSPTRG00000021475	PRDM12	97	76.630	Pan_troglodytes
ENSPMEG00000016698	prdm12b	89	82.371	ENSPANG00000025967	PRDM12	97	76.630	Papio_anubis
ENSPMEG00000016698	prdm12b	100	81.720	ENSPKIG00000007228	prdm12b	98	81.452	Paramormyrops_kingsleyae
ENSPMEG00000016698	prdm12b	92	78.529	ENSPKIG00000004305	PRDM12	91	81.366	Paramormyrops_kingsleyae
ENSPMEG00000016698	prdm12b	100	77.898	ENSPSIG00000006739	PRDM12	97	77.089	Pelodiscus_sinensis
ENSPMEG00000016698	prdm12b	99	86.264	ENSPMGG00000008867	prdm12b	96	86.612	Periophthalmus_magnuspinnatus
ENSPMEG00000016698	prdm12b	97	77.049	ENSPMGG00000002356	-	94	76.503	Periophthalmus_magnuspinnatus
ENSPMEG00000016698	prdm12b	96	78.371	ENSPEMG00000009969	Prdm12	88	82.067	Peromyscus_maniculatus_bairdii
ENSPMEG00000016698	prdm12b	100	77.989	ENSPCIG00000024119	PRDM12	97	76.694	Phascolarctos_cinereus
ENSPMEG00000016698	prdm12b	99	94.580	ENSPFOG00000019841	prdm12b	96	94.580	Poecilia_formosa
ENSPMEG00000016698	prdm12b	99	99.725	ENSPLAG00000016626	prdm12b	96	99.725	Poecilia_latipinna
ENSPMEG00000016698	prdm12b	97	73.913	ENSPREG00000003211	-	95	72.533	Poecilia_reticulata
ENSPMEG00000016698	prdm12b	99	99.178	ENSPREG00000015073	prdm12b	96	99.178	Poecilia_reticulata
ENSPMEG00000016698	prdm12b	92	81.009	ENSPPYG00000019694	PRDM12	90	83.540	Pongo_abelii
ENSPMEG00000016698	prdm12b	89	82.371	ENSPCOG00000022255	PRDM12	97	77.174	Propithecus_coquereli
ENSPMEG00000016698	prdm12b	89	82.371	ENSPVAG00000001511	PRDM12	97	76.902	Pteropus_vampyrus
ENSPMEG00000016698	prdm12b	99	87.838	ENSPNYG00000009607	prdm12b	96	87.568	Pundamilia_nyererei
ENSPMEG00000016698	prdm12b	99	76.943	ENSPNYG00000013589	-	97	75.584	Pundamilia_nyererei
ENSPMEG00000016698	prdm12b	99	79.348	ENSPNAG00000013396	PRDM12	96	79.891	Pygocentrus_nattereri
ENSPMEG00000016698	prdm12b	99	82.466	ENSPNAG00000024532	prdm12b	96	81.918	Pygocentrus_nattereri
ENSPMEG00000016698	prdm12b	89	82.067	ENSRNOG00000009218	Prdm12	97	76.630	Rattus_norvegicus
ENSPMEG00000016698	prdm12b	85	83.439	ENSRBIG00000042712	PRDM12	88	81.040	Rhinopithecus_bieti
ENSPMEG00000016698	prdm12b	86	83.648	ENSRROG00000043554	PRDM12	97	83.648	Rhinopithecus_roxellana
ENSPMEG00000016698	prdm12b	100	77.236	ENSSHAG00000015972	PRDM12	97	75.946	Sarcophilus_harrisii
ENSPMEG00000016698	prdm12b	99	85.488	ENSSMAG00000003754	prdm12b	96	84.416	Scophthalmus_maximus
ENSPMEG00000016698	prdm12b	99	86.472	ENSSDUG00000023498	prdm12b	96	85.942	Seriola_dumerili
ENSPMEG00000016698	prdm12b	99	78.342	ENSSDUG00000019071	-	97	78.610	Seriola_dumerili
ENSPMEG00000016698	prdm12b	99	85.676	ENSSLDG00000009557	prdm12b	96	85.676	Seriola_lalandi_dorsalis
ENSPMEG00000016698	prdm12b	99	76.712	ENSSLDG00000013562	-	96	76.438	Seriola_lalandi_dorsalis
ENSPMEG00000016698	prdm12b	100	77.027	ENSSPUG00000013424	PRDM12	97	75.676	Sphenodon_punctatus
ENSPMEG00000016698	prdm12b	97	73.669	ENSSPAG00000022420	-	94	74.510	Stegastes_partitus
ENSPMEG00000016698	prdm12b	99	88.410	ENSSPAG00000018824	prdm12b	96	88.410	Stegastes_partitus
ENSPMEG00000016698	prdm12b	89	82.371	ENSSSCG00000005703	PRDM12	97	76.902	Sus_scrofa
ENSPMEG00000016698	prdm12b	97	77.562	ENSTRUG00000013239	-	94	77.562	Takifugu_rubripes
ENSPMEG00000016698	prdm12b	99	87.123	ENSTRUG00000018659	prdm12b	96	86.104	Takifugu_rubripes
ENSPMEG00000016698	prdm12b	96	76.257	ENSTNIG00000005859	-	93	75.698	Tetraodon_nigroviridis
ENSPMEG00000016698	prdm12b	99	87.123	ENSTNIG00000009020	prdm12b	96	86.921	Tetraodon_nigroviridis
ENSPMEG00000016698	prdm12b	89	82.371	ENSUAMG00000009653	PRDM12	89	82.371	Ursus_americanus
ENSPMEG00000016698	prdm12b	89	82.371	ENSVVUG00000027662	PRDM12	77	82.371	Vulpes_vulpes
ENSPMEG00000016698	prdm12b	99	97.802	ENSXCOG00000002836	prdm12b	96	97.802	Xiphophorus_couchianus
ENSPMEG00000016698	prdm12b	99	96.730	ENSXMAG00000005537	prdm12b	97	96.730	Xiphophorus_maculatus
ENSPMEG00000016698	prdm12b	97	76.984	ENSXMAG00000028012	-	95	76.984	Xiphophorus_maculatus