EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMEG00000016725 (Gene tree)
Gene ID: -
Gene Symbol: chd3
Alias: -
Full Name: chromodomain helicase DNA binding protein 3
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Minus strand
Length: 12897 bases
Position: chrKQ551651.1:109665-122561
Accession: ZDB-GENE-121031-4
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000014297	ResIII	PF04851.15	9.2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000022237	-	3420	-	ENSPMEP00000014297	1139 (aa)	-	-

Gene Model

Click here to download ENSPMEG00000016725's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000016725's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMEG00000016725	chd3	87	74.081	ENSPMEG00000015657	-	56	74.369
ENSPMEG00000016725	chd3	92	64.085	ENSPMEG00000009633	chd4a	54	73.404

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000016725	chd3	94	73.247	ENSG00000170004	CHD3	85	73.734	Homo_sapiens
ENSPMEG00000016725	chd3	83	85.458	ENSAPOG00000005614	chd3	61	85.458	Acanthochromis_polyacanthus
ENSPMEG00000016725	chd3	83	88.734	ENSACIG00000019671	chd3	64	88.734	Amphilophus_citrinellus
ENSPMEG00000016725	chd3	95	88.093	ENSAOCG00000023784	chd3	58	98.780	Amphiprion_ocellaris
ENSPMEG00000016725	chd3	95	88.007	ENSAPEG00000006341	chd3	53	90.636	Amphiprion_percula
ENSPMEG00000016725	chd3	74	91.570	ENSATEG00000000848	chd3	61	87.500	Anabas_testudineus
ENSPMEG00000016725	chd3	87	74.510	ENSANAG00000034323	CHD3	52	81.374	Aotus_nancymaae
ENSPMEG00000016725	chd3	91	91.196	ENSACLG00000009222	chd3	89	91.770	Astatotilapia_calliptera
ENSPMEG00000016725	chd3	94	73.067	ENSBTAG00000014377	CHD3	53	81.607	Bos_taurus
ENSPMEG00000016725	chd3	94	73.247	ENSCJAG00000014766	CHD3	53	81.374	Callithrix_jacchus
ENSPMEG00000016725	chd3	94	73.224	ENSCAFG00000016859	CHD3	53	81.702	Canis_familiaris
ENSPMEG00000016725	chd3	87	75.607	ENSCAFG00020007422	CHD3	53	81.702	Canis_lupus_dingo
ENSPMEG00000016725	chd3	94	73.160	ENSCHIG00000016737	CHD3	53	81.723	Capra_hircus
ENSPMEG00000016725	chd3	94	73.247	ENSTSYG00000035658	CHD3	53	81.374	Carlito_syrichta
ENSPMEG00000016725	chd3	94	69.264	ENSCAPG00000014864	CHD3	51	75.320	Cavia_aperea
ENSPMEG00000016725	chd3	94	73.420	ENSCPOG00000022653	CHD3	52	80.908	Cavia_porcellus
ENSPMEG00000016725	chd3	94	73.247	ENSCCAG00000034792	CHD3	52	81.374	Cebus_capucinus
ENSPMEG00000016725	chd3	94	73.247	ENSCATG00000041717	CHD3	53	81.374	Cercocebus_atys
ENSPMEG00000016725	chd3	94	72.987	ENSCLAG00000010523	CHD3	54	81.141	Chinchilla_lanigera
ENSPMEG00000016725	chd3	94	73.328	ENSCSAG00000011122	CHD3	53	81.490	Chlorocebus_sabaeus
ENSPMEG00000016725	chd3	90	77.593	ENSCPBG00000011966	CHD3	94	77.559	Chrysemys_picta_bellii
ENSPMEG00000016725	chd3	94	73.247	ENSCANG00000037641	CHD3	53	81.374	Colobus_angolensis_palliatus
ENSPMEG00000016725	chd3	94	72.208	ENSCGRG00001011306	Chd3	54	81.585	Cricetulus_griseus_chok1gshd
ENSPMEG00000016725	chd3	91	87.593	ENSCSEG00000004489	chd3	60	85.914	Cynoglossus_semilaevis
ENSPMEG00000016725	chd3	91	90.818	ENSCVAG00000007293	chd3	61	90.818	Cyprinodon_variegatus
ENSPMEG00000016725	chd3	91	82.075	ENSDARG00000021405	chd3	56	87.339	Danio_rerio
ENSPMEG00000016725	chd3	94	73.247	ENSDORG00000010713	Chd3	54	81.490	Dipodomys_ordii
ENSPMEG00000016725	chd3	94	66.234	ENSETEG00000017733	CHD3	54	73.458	Echinops_telfairi
ENSPMEG00000016725	chd3	83	75.992	ENSEASG00005019360	CHD3	52	81.839	Equus_asinus_asinus
ENSPMEG00000016725	chd3	83	75.992	ENSECAG00000010051	CHD3	52	81.839	Equus_caballus
ENSPMEG00000016725	chd3	94	67.100	ENSEEUG00000015205	CHD3	54	74.505	Erinaceus_europaeus
ENSPMEG00000016725	chd3	83	81.442	ENSELUG00000019499	chd3	66	87.327	Esox_lucius
ENSPMEG00000016725	chd3	94	73.420	ENSFCAG00000009629	CHD3	51	81.607	Felis_catus
ENSPMEG00000016725	chd3	87	75.421	ENSFDAG00000008220	CHD3	50	81.119	Fukomys_damarensis
ENSPMEG00000016725	chd3	91	92.159	ENSGAFG00000004055	chd3	95	92.159	Gambusia_affinis
ENSPMEG00000016725	chd3	92	78.565	ENSGACG00000019275	chd3	51	85.894	Gasterosteus_aculeatus
ENSPMEG00000016725	chd3	76	82.273	ENSGAGG00000013164	CHD3	60	82.118	Gopherus_agassizii
ENSPMEG00000016725	chd3	94	73.160	ENSGGOG00000013496	CHD3	53	81.257	Gorilla_gorilla
ENSPMEG00000016725	chd3	94	72.987	ENSHGLG00000012017	CHD3	53	81.141	Heterocephalus_glaber_female
ENSPMEG00000016725	chd3	85	64.253	ENSHGLG00100013902	CHD3	57	69.914	Heterocephalus_glaber_male
ENSPMEG00000016725	chd3	95	83.433	ENSHCOG00000010170	chd3	55	87.414	Hippocampus_comes
ENSPMEG00000016725	chd3	84	83.468	ENSIPUG00000003271	chd3	59	83.669	Ictalurus_punctatus
ENSPMEG00000016725	chd3	94	73.160	ENSSTOG00000025907	CHD3	54	81.490	Ictidomys_tridecemlineatus
ENSPMEG00000016725	chd3	94	72.987	ENSJJAG00000017633	Chd3	54	81.257	Jaculus_jaculus
ENSPMEG00000016725	chd3	91	87.444	ENSKMAG00000019292	chd3	56	89.498	Kryptolebias_marmoratus
ENSPMEG00000016725	chd3	91	92.056	ENSLBEG00000028485	chd3	55	90.654	Labrus_bergylta
ENSPMEG00000016725	chd3	93	73.444	ENSLACG00000008031	CHD3	50	80.435	Latimeria_chalumnae
ENSPMEG00000016725	chd3	92	79.910	ENSLOCG00000013965	chd3	56	85.981	Lepisosteus_oculatus
ENSPMEG00000016725	chd3	90	83.253	ENSLAFG00000000572	CHD3	55	82.246	Loxodonta_africana
ENSPMEG00000016725	chd3	94	73.247	ENSMFAG00000020113	CHD3	53	81.374	Macaca_fascicularis
ENSPMEG00000016725	chd3	94	73.247	ENSMMUG00000022221	CHD3	54	81.374	Macaca_mulatta
ENSPMEG00000016725	chd3	94	73.247	ENSMNEG00000001728	CHD3	53	81.374	Macaca_nemestrina
ENSPMEG00000016725	chd3	94	73.247	ENSMLEG00000032249	CHD3	53	81.374	Mandrillus_leucophaeus
ENSPMEG00000016725	chd3	83	89.400	ENSMAMG00000000564	chd3	61	89.400	Mastacembelus_armatus
ENSPMEG00000016725	chd3	94	72.035	ENSMAUG00000013873	Chd3	52	81.469	Mesocricetus_auratus
ENSPMEG00000016725	chd3	94	73.247	ENSMICG00000008741	CHD3	51	81.490	Microcebus_murinus
ENSPMEG00000016725	chd3	94	72.294	ENSMOCG00000004848	Chd3	54	81.585	Microtus_ochrogaster
ENSPMEG00000016725	chd3	91	84.771	ENSMMOG00000012699	chd3	60	81.044	Mola_mola
ENSPMEG00000016725	chd3	83	75.512	ENSMODG00000007509	CHD3	53	80.908	Monodelphis_domestica
ENSPMEG00000016725	chd3	93	80.730	MGP_CAROLIEiJ_G0016564	Chd3	56	81.469	Mus_caroli
ENSPMEG00000016725	chd3	93	80.616	ENSMUSG00000018474	Chd3	56	81.469	Mus_musculus
ENSPMEG00000016725	chd3	94	73.137	MGP_PahariEiJ_G0017695	Chd3	56	81.469	Mus_pahari
ENSPMEG00000016725	chd3	93	80.730	MGP_SPRETEiJ_G0017400	Chd3	56	81.469	Mus_spretus
ENSPMEG00000016725	chd3	76	81.279	ENSMPUG00000008861	CHD3	50	82.063	Mustela_putorius_furo
ENSPMEG00000016725	chd3	94	72.429	ENSMLUG00000014643	-	53	81.395	Myotis_lucifugus
ENSPMEG00000016725	chd3	94	73.074	ENSNGAG00000000773	Chd3	52	81.257	Nannospalax_galili
ENSPMEG00000016725	chd3	83	88.241	ENSNBRG00000000636	chd3	59	88.139	Neolamprologus_brichardi
ENSPMEG00000016725	chd3	94	72.719	ENSNLEG00000009770	CHD3	55	80.442	Nomascus_leucogenys
ENSPMEG00000016725	chd3	87	74.673	ENSOPRG00000011069	CHD3	53	80.186	Ochotona_princeps
ENSPMEG00000016725	chd3	94	72.987	ENSODEG00000017785	CHD3	53	81.141	Octodon_degus
ENSPMEG00000016725	chd3	93	87.478	ENSONIG00000009292	chd3	55	90.023	Oreochromis_niloticus
ENSPMEG00000016725	chd3	94	71.626	ENSOCUG00000029299	CHD3	53	80.000	Oryctolagus_cuniculus
ENSPMEG00000016725	chd3	90	85.061	ENSORLG00000007107	chd3	64	82.633	Oryzias_latipes
ENSPMEG00000016725	chd3	95	88.605	ENSORLG00020008387	chd3	98	89.061	Oryzias_latipes_hni
ENSPMEG00000016725	chd3	74	92.614	ENSOMEG00000013691	chd3	56	98.734	Oryzias_melastigma
ENSPMEG00000016725	chd3	94	73.247	ENSOGAG00000003216	CHD3	53	81.374	Otolemur_garnettii
ENSPMEG00000016725	chd3	94	72.900	ENSPPAG00000032886	CHD3	53	80.792	Pan_paniscus
ENSPMEG00000016725	chd3	94	73.333	ENSPPRG00000000626	CHD3	53	81.607	Panthera_pardus
ENSPMEG00000016725	chd3	94	73.247	ENSPTRG00000008714	CHD3	53	81.374	Pan_troglodytes
ENSPMEG00000016725	chd3	94	73.247	ENSPANG00000023938	CHD3	53	81.374	Papio_anubis
ENSPMEG00000016725	chd3	86	95.000	ENSPKIG00000006305	chd3	54	87.052	Paramormyrops_kingsleyae
ENSPMEG00000016725	chd3	74	80.686	ENSPSIG00000010177	CHD3	78	80.457	Pelodiscus_sinensis
ENSPMEG00000016725	chd3	94	72.294	ENSPEMG00000014262	Chd3	53	81.585	Peromyscus_maniculatus_bairdii
ENSPMEG00000016725	chd3	91	82.644	ENSPCIG00000005442	CHD3	55	80.908	Phascolarctos_cinereus
ENSPMEG00000016725	chd3	95	90.862	ENSPFOG00000012464	chd3	54	90.862	Poecilia_formosa
ENSPMEG00000016725	chd3	99	95.560	ENSPLAG00000002887	chd3	99	95.560	Poecilia_latipinna
ENSPMEG00000016725	chd3	94	92.246	ENSPREG00000011044	chd3	61	92.246	Poecilia_reticulata
ENSPMEG00000016725	chd3	91	71.858	ENSPPYG00000007940	CHD3	53	78.580	Pongo_abelii
ENSPMEG00000016725	chd3	87	85.996	ENSPCAG00000004350	CHD3	50	85.996	Procavia_capensis
ENSPMEG00000016725	chd3	94	73.247	ENSPCOG00000020952	CHD3	53	81.490	Propithecus_coquereli
ENSPMEG00000016725	chd3	92	83.750	ENSPNAG00000020393	chd3	56	96.296	Pygocentrus_nattereri
ENSPMEG00000016725	chd3	83	75.702	ENSRNOG00000009722	Chd3	52	81.352	Rattus_norvegicus
ENSPMEG00000016725	chd3	94	73.438	ENSRBIG00000033562	CHD3	53	81.374	Rhinopithecus_bieti
ENSPMEG00000016725	chd3	94	73.247	ENSRROG00000029554	CHD3	53	81.374	Rhinopithecus_roxellana
ENSPMEG00000016725	chd3	94	73.247	ENSSBOG00000020719	CHD3	53	81.374	Saimiri_boliviensis_boliviensis
ENSPMEG00000016725	chd3	94	73.501	ENSSHAG00000014412	CHD3	55	80.908	Sarcophilus_harrisii
ENSPMEG00000016725	chd3	77	89.206	ENSSFOG00015023123	chd3	55	67.178	Scleropages_formosus
ENSPMEG00000016725	chd3	83	88.224	ENSSMAG00000006451	chd3	52	92.479	Scophthalmus_maximus
ENSPMEG00000016725	chd3	89	92.031	ENSSDUG00000005792	chd3	96	92.031	Seriola_dumerili
ENSPMEG00000016725	chd3	95	87.748	ENSSPAG00000013694	chd3	59	100.000	Stegastes_partitus
ENSPMEG00000016725	chd3	94	73.414	ENSSSCG00000021363	CHD3	56	81.839	Sus_scrofa
ENSPMEG00000016725	chd3	91	87.008	ENSTRUG00000014990	chd3	67	84.950	Takifugu_rubripes
ENSPMEG00000016725	chd3	91	72.594	ENSUAMG00000005475	CHD3	52	79.191	Ursus_americanus
ENSPMEG00000016725	chd3	94	73.224	ENSVVUG00000028011	CHD3	52	81.702	Vulpes_vulpes
ENSPMEG00000016725	chd3	92	64.305	ENSXETG00000012991	chd3	51	67.923	Xenopus_tropicalis
ENSPMEG00000016725	chd3	95	94.336	ENSXCOG00000000809	chd3	95	94.336	Xiphophorus_couchianus
ENSPMEG00000016725	chd3	83	91.309	ENSXMAG00000016035	chd3	65	91.309	Xiphophorus_maculatus