EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMEG00000016826 (Gene tree)
Gene ID: 106908615
Gene Symbol: rnaseh1
Alias: -
Full Name: ribonuclease H1
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Minus strand
Length: 14426 bases
Position: chrKQ553840.1:18091-32516
Accession: 106908615
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000014425	RNase_H	PF00075.24	5.1e-43	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000022404	-	1337	XM_014974752	ENSPMEP00000014425	295 (aa)	XP_014830238	UPI00072E7332

Gene Model

Click here to download ENSPMEG00000016826's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000016826's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000016826	rnaseh1	90	55.970	ENSG00000171865	RNASEH1	90	55.970	Homo_sapiens
ENSPMEG00000016826	rnaseh1	100	70.169	ENSAPOG00000000412	rnaseh1	98	70.169	Acanthochromis_polyacanthus
ENSPMEG00000016826	rnaseh1	90	54.478	ENSAMEG00000018433	RNASEH1	89	54.887	Ailuropoda_melanoleuca
ENSPMEG00000016826	rnaseh1	100	72.881	ENSACIG00000014666	rnaseh1	97	72.881	Amphilophus_citrinellus
ENSPMEG00000016826	rnaseh1	100	71.864	ENSAOCG00000015210	rnaseh1	98	71.864	Amphiprion_ocellaris
ENSPMEG00000016826	rnaseh1	100	71.959	ENSAPEG00000014104	rnaseh1	98	71.959	Amphiprion_percula
ENSPMEG00000016826	rnaseh1	100	71.186	ENSATEG00000000598	rnaseh1	96	74.908	Anabas_testudineus
ENSPMEG00000016826	rnaseh1	86	55.985	ENSAPLG00000001961	RNASEH1	100	55.985	Anas_platyrhynchos
ENSPMEG00000016826	rnaseh1	91	48.667	ENSACAG00000016857	rnaseh1	93	48.667	Anolis_carolinensis
ENSPMEG00000016826	rnaseh1	90	56.716	ENSANAG00000024055	RNASEH1	90	56.716	Aotus_nancymaae
ENSPMEG00000016826	rnaseh1	100	72.667	ENSACLG00000006741	rnaseh1	97	73.000	Astatotilapia_calliptera
ENSPMEG00000016826	rnaseh1	96	52.297	ENSAMXG00000042940	rnaseh1	97	56.877	Astyanax_mexicanus
ENSPMEG00000016826	rnaseh1	91	57.037	ENSBTAG00000016235	RNASEH1	91	57.037	Bos_taurus
ENSPMEG00000016826	rnaseh1	89	35.496	WBGene00004382	rnh-1.0	95	35.496	Caenorhabditis_elegans
ENSPMEG00000016826	rnaseh1	90	55.147	ENSCJAG00000035450	RNASEH1	90	55.147	Callithrix_jacchus
ENSPMEG00000016826	rnaseh1	98	51.712	ENSCAFG00000003259	RNASEH1	95	51.712	Canis_familiaris
ENSPMEG00000016826	rnaseh1	51	65.563	ENSCAFG00020004994	RNASEH1	97	65.563	Canis_lupus_dingo
ENSPMEG00000016826	rnaseh1	83	46.559	ENSCHIG00000022230	-	99	46.559	Capra_hircus
ENSPMEG00000016826	rnaseh1	91	57.037	ENSCHIG00000022264	-	90	57.037	Capra_hircus
ENSPMEG00000016826	rnaseh1	90	54.412	ENSTSYG00000012926	RNASEH1	89	54.412	Carlito_syrichta
ENSPMEG00000016826	rnaseh1	83	56.911	ENSCAPG00000004813	RNASEH1	97	56.911	Cavia_aperea
ENSPMEG00000016826	rnaseh1	91	55.762	ENSCPOG00000022278	Rnaseh1	87	55.762	Cavia_porcellus
ENSPMEG00000016826	rnaseh1	90	56.250	ENSCCAG00000038017	RNASEH1	90	56.250	Cebus_capucinus
ENSPMEG00000016826	rnaseh1	90	49.811	ENSCATG00000016818	-	89	49.811	Cercocebus_atys
ENSPMEG00000016826	rnaseh1	90	55.224	ENSCATG00000016515	-	90	55.224	Cercocebus_atys
ENSPMEG00000016826	rnaseh1	89	57.143	ENSCLAG00000002440	RNASEH1	89	57.143	Chinchilla_lanigera
ENSPMEG00000016826	rnaseh1	90	55.597	ENSCSAG00000006943	RNASEH1	90	55.597	Chlorocebus_sabaeus
ENSPMEG00000016826	rnaseh1	52	68.627	ENSCHOG00000008547	RNASEH1	75	68.627	Choloepus_hoffmanni
ENSPMEG00000016826	rnaseh1	90	55.273	ENSCPBG00000021620	RNASEH1	99	55.273	Chrysemys_picta_bellii
ENSPMEG00000016826	rnaseh1	96	36.486	ENSCING00000014054	-	97	36.486	Ciona_intestinalis
ENSPMEG00000016826	rnaseh1	76	37.768	ENSCSAVG00000000009	-	96	37.768	Ciona_savignyi
ENSPMEG00000016826	rnaseh1	90	55.597	ENSCANG00000037763	RNASEH1	90	55.597	Colobus_angolensis_palliatus
ENSPMEG00000016826	rnaseh1	90	55.970	ENSCGRG00001008950	Rnaseh1	90	57.836	Cricetulus_griseus_chok1gshd
ENSPMEG00000016826	rnaseh1	90	55.970	ENSCGRG00000006029	Rnaseh1	90	57.836	Cricetulus_griseus_crigri
ENSPMEG00000016826	rnaseh1	100	63.725	ENSCSEG00000005741	rnaseh1	95	67.509	Cynoglossus_semilaevis
ENSPMEG00000016826	rnaseh1	100	81.356	ENSCVAG00000018717	rnaseh1	98	81.356	Cyprinodon_variegatus
ENSPMEG00000016826	rnaseh1	91	67.273	ENSDARG00000042571	rnaseh1	98	67.273	Danio_rerio
ENSPMEG00000016826	rnaseh1	90	54.682	ENSDNOG00000016056	RNASEH1	90	54.682	Dasypus_novemcinctus
ENSPMEG00000016826	rnaseh1	90	53.731	ENSDORG00000000704	Rnaseh1	90	53.731	Dipodomys_ordii
ENSPMEG00000016826	rnaseh1	91	39.796	FBgn0023171	rnh1	94	39.796	Drosophila_melanogaster
ENSPMEG00000016826	rnaseh1	90	52.256	ENSETEG00000012674	RNASEH1	89	52.256	Echinops_telfairi
ENSPMEG00000016826	rnaseh1	89	45.627	ENSEBUG00000006116	rnaseh1	78	45.627	Eptatretus_burgeri
ENSPMEG00000016826	rnaseh1	89	43.000	ENSEBUG00000008898	rnaseh1	98	43.000	Eptatretus_burgeri
ENSPMEG00000016826	rnaseh1	99	52.189	ENSEASG00005022200	RNASEH1	95	52.189	Equus_asinus_asinus
ENSPMEG00000016826	rnaseh1	99	52.189	ENSECAG00000020695	RNASEH1	95	52.189	Equus_caballus
ENSPMEG00000016826	rnaseh1	99	65.333	ENSELUG00000010112	rnaseh1	99	65.333	Esox_lucius
ENSPMEG00000016826	rnaseh1	89	54.924	ENSFCAG00000025832	RNASEH1	89	54.924	Felis_catus
ENSPMEG00000016826	rnaseh1	97	54.054	ENSFALG00000002069	RNASEH1	99	54.054	Ficedula_albicollis
ENSPMEG00000016826	rnaseh1	89	54.511	ENSFDAG00000002035	RNASEH1	79	54.511	Fukomys_damarensis
ENSPMEG00000016826	rnaseh1	99	65.085	ENSGMOG00000013818	rnaseh1	99	65.085	Gadus_morhua
ENSPMEG00000016826	rnaseh1	96	53.448	ENSGALG00000016389	RNASEH1	98	53.448	Gallus_gallus
ENSPMEG00000016826	rnaseh1	99	92.857	ENSGAFG00000001776	rnaseh1	99	92.857	Gambusia_affinis
ENSPMEG00000016826	rnaseh1	100	69.257	ENSGACG00000011935	rnaseh1	99	69.257	Gasterosteus_aculeatus
ENSPMEG00000016826	rnaseh1	90	56.364	ENSGAGG00000009150	RNASEH1	62	57.246	Gopherus_agassizii
ENSPMEG00000016826	rnaseh1	90	55.639	ENSGGOG00000034822	RNASEH1	90	55.639	Gorilla_gorilla
ENSPMEG00000016826	rnaseh1	100	72.333	ENSHBUG00000004666	rnaseh1	97	72.667	Haplochromis_burtoni
ENSPMEG00000016826	rnaseh1	89	56.061	ENSHGLG00000002585	Rnaseh1	82	56.061	Heterocephalus_glaber_female
ENSPMEG00000016826	rnaseh1	89	56.061	ENSHGLG00100005105	Rnaseh1	82	56.061	Heterocephalus_glaber_male
ENSPMEG00000016826	rnaseh1	97	64.164	ENSHCOG00000012329	rnaseh1	95	65.188	Hippocampus_comes
ENSPMEG00000016826	rnaseh1	100	58.725	ENSIPUG00000023060	rnaseh1	98	61.679	Ictalurus_punctatus
ENSPMEG00000016826	rnaseh1	89	56.015	ENSSTOG00000012774	RNASEH1	91	56.015	Ictidomys_tridecemlineatus
ENSPMEG00000016826	rnaseh1	90	50.943	ENSJJAG00000021481	-	89	50.943	Jaculus_jaculus
ENSPMEG00000016826	rnaseh1	88	45.174	ENSJJAG00000008994	-	89	45.174	Jaculus_jaculus
ENSPMEG00000016826	rnaseh1	81	53.333	ENSJJAG00000020238	Rnaseh1	90	53.333	Jaculus_jaculus
ENSPMEG00000016826	rnaseh1	99	73.129	ENSKMAG00000001373	rnaseh1	98	73.129	Kryptolebias_marmoratus
ENSPMEG00000016826	rnaseh1	99	66.553	ENSLBEG00000004480	rnaseh1	97	71.747	Labrus_bergylta
ENSPMEG00000016826	rnaseh1	93	55.789	ENSLACG00000007100	RNASEH1	89	56.522	Latimeria_chalumnae
ENSPMEG00000016826	rnaseh1	91	58.123	ENSLOCG00000017212	rnaseh1	98	58.484	Lepisosteus_oculatus
ENSPMEG00000016826	rnaseh1	89	57.778	ENSLAFG00000015091	RNASEH1	89	57.778	Loxodonta_africana
ENSPMEG00000016826	rnaseh1	90	55.597	ENSMFAG00000000063	-	90	55.597	Macaca_fascicularis
ENSPMEG00000016826	rnaseh1	98	48.097	ENSMFAG00000002323	-	97	48.097	Macaca_fascicularis
ENSPMEG00000016826	rnaseh1	98	46.865	ENSMMUG00000019280	-	97	46.865	Macaca_mulatta
ENSPMEG00000016826	rnaseh1	90	55.970	ENSMNEG00000040183	-	90	55.970	Macaca_nemestrina
ENSPMEG00000016826	rnaseh1	98	46.865	ENSMNEG00000029676	-	97	46.865	Macaca_nemestrina
ENSPMEG00000016826	rnaseh1	84	55.600	ENSMLEG00000039352	-	98	55.600	Mandrillus_leucophaeus
ENSPMEG00000016826	rnaseh1	98	48.515	ENSMLEG00000028662	-	97	48.515	Mandrillus_leucophaeus
ENSPMEG00000016826	rnaseh1	100	69.595	ENSMAMG00000019725	rnaseh1	96	73.162	Mastacembelus_armatus
ENSPMEG00000016826	rnaseh1	100	72.667	ENSMZEG00005013006	rnaseh1	97	73.000	Maylandia_zebra
ENSPMEG00000016826	rnaseh1	81	54.694	ENSMGAG00000013979	RNASEH1	99	54.694	Meleagris_gallopavo
ENSPMEG00000016826	rnaseh1	90	57.090	ENSMAUG00000014957	Rnaseh1	90	57.090	Mesocricetus_auratus
ENSPMEG00000016826	rnaseh1	89	56.716	ENSMICG00000033156	RNASEH1	88	56.716	Microcebus_murinus
ENSPMEG00000016826	rnaseh1	90	56.604	ENSMOCG00000015522	Rnaseh1	90	56.604	Microtus_ochrogaster
ENSPMEG00000016826	rnaseh1	99	70.648	ENSMMOG00000015902	rnaseh1	97	70.648	Mola_mola
ENSPMEG00000016826	rnaseh1	100	51.342	ENSMODG00000014491	-	99	51.342	Monodelphis_domestica
ENSPMEG00000016826	rnaseh1	79	48.523	ENSMODG00000028814	-	91	50.840	Monodelphis_domestica
ENSPMEG00000016826	rnaseh1	100	67.905	ENSMALG00000010565	rnaseh1	98	67.905	Monopterus_albus
ENSPMEG00000016826	rnaseh1	90	57.895	MGP_CAROLIEiJ_G0017660	Rnaseh1	90	57.895	Mus_caroli
ENSPMEG00000016826	rnaseh1	90	58.271	ENSMUSG00000020630	Rnaseh1	90	58.271	Mus_musculus
ENSPMEG00000016826	rnaseh1	90	54.982	MGP_PahariEiJ_G0029418	Rnaseh1	90	57.358	Mus_pahari
ENSPMEG00000016826	rnaseh1	90	56.767	MGP_SPRETEiJ_G0018502	Rnaseh1	90	56.767	Mus_spretus
ENSPMEG00000016826	rnaseh1	51	65.563	ENSMPUG00000012984	RNASEH1	73	65.563	Mustela_putorius_furo
ENSPMEG00000016826	rnaseh1	90	56.343	ENSNGAG00000015966	Rnaseh1	85	56.343	Nannospalax_galili
ENSPMEG00000016826	rnaseh1	100	72.000	ENSNBRG00000008739	rnaseh1	97	72.333	Neolamprologus_brichardi
ENSPMEG00000016826	rnaseh1	82	49.180	ENSNLEG00000000059	-	88	49.180	Nomascus_leucogenys
ENSPMEG00000016826	rnaseh1	90	49.254	ENSNLEG00000015400	RNASEH1	88	49.254	Nomascus_leucogenys
ENSPMEG00000016826	rnaseh1	99	35.495	ENSMEUG00000003610	-	99	35.495	Notamacropus_eugenii
ENSPMEG00000016826	rnaseh1	91	60.223	ENSOPRG00000005072	RNASEH1	90	60.223	Ochotona_princeps
ENSPMEG00000016826	rnaseh1	89	58.271	ENSODEG00000000235	Rnaseh1	86	58.271	Octodon_degus
ENSPMEG00000016826	rnaseh1	92	76.449	ENSONIG00000018697	rnaseh1	99	76.449	Oreochromis_niloticus
ENSPMEG00000016826	rnaseh1	90	56.343	ENSOCUG00000006117	RNASEH1	90	56.343	Oryctolagus_cuniculus
ENSPMEG00000016826	rnaseh1	92	73.260	ENSORLG00000018127	rnaseh1	97	73.260	Oryzias_latipes
ENSPMEG00000016826	rnaseh1	100	69.595	ENSORLG00020013660	rnaseh1	98	69.595	Oryzias_latipes_hni
ENSPMEG00000016826	rnaseh1	100	69.595	ENSORLG00015011338	rnaseh1	98	69.595	Oryzias_latipes_hsok
ENSPMEG00000016826	rnaseh1	91	70.000	ENSOMEG00000004710	rnaseh1	99	70.000	Oryzias_melastigma
ENSPMEG00000016826	rnaseh1	89	56.458	ENSOGAG00000017176	RNASEH1	89	56.458	Otolemur_garnettii
ENSPMEG00000016826	rnaseh1	93	48.958	ENSOARG00000005386	RNASEH1	93	48.958	Ovis_aries
ENSPMEG00000016826	rnaseh1	90	55.970	ENSPPAG00000034221	RNASEH1	90	55.970	Pan_paniscus
ENSPMEG00000016826	rnaseh1	90	54.511	ENSPPRG00000015513	RNASEH1	89	54.511	Panthera_pardus
ENSPMEG00000016826	rnaseh1	84	54.839	ENSPTIG00000019034	RNASEH1	83	54.839	Panthera_tigris_altaica
ENSPMEG00000016826	rnaseh1	83	49.004	ENSPTRG00000043403	-	91	49.004	Pan_troglodytes
ENSPMEG00000016826	rnaseh1	90	55.970	ENSPTRG00000011614	RNASEH1	90	55.970	Pan_troglodytes
ENSPMEG00000016826	rnaseh1	90	55.597	ENSPANG00000000443	RNASEH1	98	55.556	Papio_anubis
ENSPMEG00000016826	rnaseh1	90	50.189	ENSPANG00000018246	-	89	50.189	Papio_anubis
ENSPMEG00000016826	rnaseh1	92	59.058	ENSPKIG00000003146	rnaseh1	99	60.870	Paramormyrops_kingsleyae
ENSPMEG00000016826	rnaseh1	90	54.779	ENSPSIG00000002937	RNASEH1	99	54.779	Pelodiscus_sinensis
ENSPMEG00000016826	rnaseh1	98	63.918	ENSPMGG00000017463	rnaseh1	99	63.918	Periophthalmus_magnuspinnatus
ENSPMEG00000016826	rnaseh1	90	55.311	ENSPEMG00000022465	-	90	57.463	Peromyscus_maniculatus_bairdii
ENSPMEG00000016826	rnaseh1	52	33.548	ENSPCIG00000026047	-	87	33.548	Phascolarctos_cinereus
ENSPMEG00000016826	rnaseh1	100	49.664	ENSPCIG00000023334	-	99	49.664	Phascolarctos_cinereus
ENSPMEG00000016826	rnaseh1	100	98.983	ENSPFOG00000002841	rnaseh1	100	98.983	Poecilia_formosa
ENSPMEG00000016826	rnaseh1	75	78.829	ENSPLAG00000021349	-	85	78.829	Poecilia_latipinna
ENSPMEG00000016826	rnaseh1	100	94.020	ENSPREG00000012197	rnaseh1	100	94.020	Poecilia_reticulata
ENSPMEG00000016826	rnaseh1	90	45.149	ENSPPYG00000025873	RNASEH1	88	45.149	Pongo_abelii
ENSPMEG00000016826	rnaseh1	82	52.033	ENSPPYG00000008067	-	90	52.033	Pongo_abelii
ENSPMEG00000016826	rnaseh1	91	55.109	ENSPCAG00000002500	RNASEH1	90	55.109	Procavia_capensis
ENSPMEG00000016826	rnaseh1	90	50.741	ENSPCOG00000019444	RNASEH1	89	50.741	Propithecus_coquereli
ENSPMEG00000016826	rnaseh1	91	53.597	ENSPVAG00000002070	RNASEH1	91	53.597	Pteropus_vampyrus
ENSPMEG00000016826	rnaseh1	100	72.333	ENSPNYG00000001292	rnaseh1	97	72.667	Pundamilia_nyererei
ENSPMEG00000016826	rnaseh1	99	61.000	ENSPNAG00000022344	rnaseh1	99	61.000	Pygocentrus_nattereri
ENSPMEG00000016826	rnaseh1	89	57.795	ENSRNOG00000008584	Rnaseh1	90	57.736	Rattus_norvegicus
ENSPMEG00000016826	rnaseh1	90	55.597	ENSRBIG00000034222	RNASEH1	89	55.597	Rhinopithecus_bieti
ENSPMEG00000016826	rnaseh1	90	55.597	ENSRROG00000041761	RNASEH1	89	55.597	Rhinopithecus_roxellana
ENSPMEG00000016826	rnaseh1	89	52.273	YMR234W	-	85	52.273	Saccharomyces_cerevisiae
ENSPMEG00000016826	rnaseh1	89	57.037	ENSSBOG00000025411	RNASEH1	89	57.037	Saimiri_boliviensis_boliviensis
ENSPMEG00000016826	rnaseh1	91	55.678	ENSSHAG00000013051	RNASEH1	88	55.678	Sarcophilus_harrisii
ENSPMEG00000016826	rnaseh1	99	60.726	ENSSFOG00015002709	rnaseh1	98	60.726	Scleropages_formosus
ENSPMEG00000016826	rnaseh1	99	69.863	ENSSMAG00000007586	rnaseh1	96	69.863	Scophthalmus_maximus
ENSPMEG00000016826	rnaseh1	96	71.731	ENSSDUG00000008217	rnaseh1	94	74.157	Seriola_dumerili
ENSPMEG00000016826	rnaseh1	89	70.611	ENSSLDG00000000442	rnaseh1	95	72.908	Seriola_lalandi_dorsalis
ENSPMEG00000016826	rnaseh1	91	55.678	ENSSPUG00000006644	RNASEH1	93	55.678	Sphenodon_punctatus
ENSPMEG00000016826	rnaseh1	99	72.603	ENSSPAG00000009353	rnaseh1	96	72.603	Stegastes_partitus
ENSPMEG00000016826	rnaseh1	91	57.194	ENSSSCG00000025305	RNASEH1	97	53.770	Sus_scrofa
ENSPMEG00000016826	rnaseh1	96	54.237	ENSTGUG00000012980	RNASEH1	97	54.181	Taeniopygia_guttata
ENSPMEG00000016826	rnaseh1	95	70.819	ENSTRUG00000015774	rnaseh1	96	72.491	Takifugu_rubripes
ENSPMEG00000016826	rnaseh1	91	72.862	ENSTNIG00000010715	rnaseh1	96	72.862	Tetraodon_nigroviridis
ENSPMEG00000016826	rnaseh1	91	54.579	ENSTTRG00000001615	RNASEH1	90	54.579	Tursiops_truncatus
ENSPMEG00000016826	rnaseh1	51	64.901	ENSUAMG00000018254	RNASEH1	78	64.901	Ursus_americanus
ENSPMEG00000016826	rnaseh1	69	52.632	ENSUMAG00000003941	RNASEH1	65	52.632	Ursus_maritimus
ENSPMEG00000016826	rnaseh1	91	49.451	ENSVPAG00000011589	RNASEH1	90	49.451	Vicugna_pacos
ENSPMEG00000016826	rnaseh1	98	52.397	ENSVVUG00000008633	RNASEH1	85	52.397	Vulpes_vulpes
ENSPMEG00000016826	rnaseh1	90	56.667	ENSXETG00000001212	rnaseh1	99	49.677	Xenopus_tropicalis
ENSPMEG00000016826	rnaseh1	89	37.643	ENSXETG00000030371	-	99	37.643	Xenopus_tropicalis
ENSPMEG00000016826	rnaseh1	99	93.515	ENSXMAG00000002357	rnaseh1	99	93.515	Xiphophorus_maculatus