EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMEG00000016987 (Gene tree)
Gene ID: 106914831
Gene Symbol: ercc3
Alias: -
Full Name: ERCC excision repair 3%2C TFIIH core complex helicase subunit
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Minus strand
Length: 22942 bases
Position: chrKQ551117.1:209749-232690
Accession: 106914831
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000014406	ResIII	PF04851.15	2e-15	1	1
ENSPMEP00000014424	ResIII	PF04851.15	2e-15	1	1
ENSPMEP00000014432	ResIII	PF04851.15	2e-15	1	1
ENSPMEP00000014444	ResIII	PF04851.15	2e-15	1	1
ENSPMEP00000014452	ResIII	PF04851.15	2e-15	1	1
ENSPMEP00000030420	ResIII	PF04851.15	2e-15	1	1
ENSPMEP00000030436	ResIII	PF04851.15	2e-15	1	1
ENSPMEP00000030440	ResIII	PF04851.15	2e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000022397	-	3070	-	ENSPMEP00000030420	780 (aa)	-	UPI000514BFBC
ENSPMET00000032603	-	3070	-	ENSPMEP00000030436	780 (aa)	-	UPI000514BFBC
ENSPMET00000022592	-	3070	-	ENSPMEP00000014424	780 (aa)	-	UPI000514BFBC
ENSPMET00000032606	-	3070	-	ENSPMEP00000030440	780 (aa)	-	UPI000514BFBC
ENSPMET00000022451	-	3070	-	ENSPMEP00000014452	780 (aa)	-	UPI000514BFBC
ENSPMET00000022388	-	3070	XM_014981910	ENSPMEP00000014406	780 (aa)	XP_014837396	UPI000514BFBC
ENSPMET00000022423	-	3070	-	ENSPMEP00000014432	780 (aa)	-	UPI000514BFBC
ENSPMET00000022433	-	3070	-	ENSPMEP00000014444	780 (aa)	-	UPI000514BFBC

Gene Model

Click here to download ENSPMEG00000016987's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000016987's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000016987	ercc3	100	88.041	ENSG00000163161	ERCC3	99	97.516	Homo_sapiens
ENSPMEG00000016987	ercc3	100	94.764	ENSAPOG00000014383	ercc3	98	95.182	Acanthochromis_polyacanthus
ENSPMEG00000016987	ercc3	99	88.205	ENSAMEG00000016840	ERCC3	96	89.182	Ailuropoda_melanoleuca
ENSPMEG00000016987	ercc3	99	95.097	ENSACIG00000000126	ercc3	99	95.059	Amphilophus_citrinellus
ENSPMEG00000016987	ercc3	100	95.147	ENSAOCG00000009396	ercc3	98	95.573	Amphiprion_ocellaris
ENSPMEG00000016987	ercc3	100	95.019	ENSAPEG00000023077	ercc3	98	95.443	Amphiprion_percula
ENSPMEG00000016987	ercc3	100	94.253	ENSATEG00000014860	ercc3	98	94.661	Anabas_testudineus
ENSPMEG00000016987	ercc3	91	87.764	ENSAPLG00000012068	ERCC3	98	87.764	Anas_platyrhynchos
ENSPMEG00000016987	ercc3	92	88.920	ENSACAG00000009919	ERCC3	100	88.920	Anolis_carolinensis
ENSPMEG00000016987	ercc3	100	87.913	ENSANAG00000031091	ERCC3	96	89.550	Aotus_nancymaae
ENSPMEG00000016987	ercc3	100	94.636	ENSACLG00000022508	ercc3	98	95.052	Astatotilapia_calliptera
ENSPMEG00000016987	ercc3	100	91.826	ENSAMXG00000036947	ercc3	98	92.448	Astyanax_mexicanus
ENSPMEG00000016987	ercc3	100	87.532	ENSBTAG00000020777	ERCC3	96	88.757	Bos_taurus
ENSPMEG00000016987	ercc3	100	61.721	WBGene00013441	xpb-1	96	63.719	Caenorhabditis_elegans
ENSPMEG00000016987	ercc3	100	88.041	ENSCJAG00000010416	ERCC3	96	89.683	Callithrix_jacchus
ENSPMEG00000016987	ercc3	97	89.050	ENSCAFG00000004497	ERCC3	97	89.050	Canis_familiaris
ENSPMEG00000016987	ercc3	97	89.050	ENSCAFG00020003495	ERCC3	97	89.050	Canis_lupus_dingo
ENSPMEG00000016987	ercc3	100	87.532	ENSCHIG00000014551	ERCC3	96	88.889	Capra_hircus
ENSPMEG00000016987	ercc3	99	87.645	ENSTSYG00000004137	ERCC3	97	89.021	Carlito_syrichta
ENSPMEG00000016987	ercc3	78	80.882	ENSCAPG00000017027	ERCC3	93	80.619	Cavia_aperea
ENSPMEG00000016987	ercc3	100	86.641	ENSCPOG00000002144	ERCC3	96	88.360	Cavia_porcellus
ENSPMEG00000016987	ercc3	100	88.041	ENSCCAG00000024421	ERCC3	96	89.683	Cebus_capucinus
ENSPMEG00000016987	ercc3	100	88.041	ENSCATG00000032313	ERCC3	96	89.683	Cercocebus_atys
ENSPMEG00000016987	ercc3	100	86.896	ENSCLAG00000002965	ERCC3	92	88.757	Chinchilla_lanigera
ENSPMEG00000016987	ercc3	100	87.913	ENSCSAG00000016827	ERCC3	96	89.550	Chlorocebus_sabaeus
ENSPMEG00000016987	ercc3	83	94.737	ENSCHOG00000007414	ERCC3	79	94.737	Choloepus_hoffmanni
ENSPMEG00000016987	ercc3	92	88.920	ENSCPBG00000013638	ERCC3	100	88.920	Chrysemys_picta_bellii
ENSPMEG00000016987	ercc3	96	71.186	ENSCING00000002867	ercc3	95	71.654	Ciona_intestinalis
ENSPMEG00000016987	ercc3	100	88.168	ENSCANG00000007094	ERCC3	96	89.815	Colobus_angolensis_palliatus
ENSPMEG00000016987	ercc3	100	87.913	ENSCGRG00001009426	Ercc3	96	89.550	Cricetulus_griseus_chok1gshd
ENSPMEG00000016987	ercc3	97	87.402	ENSCGRG00000015547	Ercc3	96	89.071	Cricetulus_griseus_crigri
ENSPMEG00000016987	ercc3	100	91.720	ENSCSEG00000016479	ercc3	98	92.588	Cynoglossus_semilaevis
ENSPMEG00000016987	ercc3	100	97.190	ENSCVAG00000015177	ercc3	100	97.190	Cyprinodon_variegatus
ENSPMEG00000016987	ercc3	98	92.057	ENSDARG00000002402	ercc3	98	92.068	Danio_rerio
ENSPMEG00000016987	ercc3	57	92.986	ENSDNOG00000035027	ERCC3	95	92.986	Dasypus_novemcinctus
ENSPMEG00000016987	ercc3	97	89.418	ENSDORG00000004671	Ercc3	97	89.418	Dipodomys_ordii
ENSPMEG00000016987	ercc3	99	69.192	FBgn0001179	hay	94	70.735	Drosophila_melanogaster
ENSPMEG00000016987	ercc3	90	89.030	ENSETEG00000019887	ERCC3	86	89.030	Echinops_telfairi
ENSPMEG00000016987	ercc3	100	79.874	ENSEBUG00000009773	ercc3	95	82.213	Eptatretus_burgeri
ENSPMEG00000016987	ercc3	100	85.112	ENSEASG00005022466	ERCC3	93	89.229	Equus_asinus_asinus
ENSPMEG00000016987	ercc3	100	87.532	ENSECAG00000006589	ERCC3	96	88.889	Equus_caballus
ENSPMEG00000016987	ercc3	93	88.646	ENSEEUG00000001057	ERCC3	97	89.592	Erinaceus_europaeus
ENSPMEG00000016987	ercc3	100	89.427	ENSELUG00000000089	ercc3	98	90.247	Esox_lucius
ENSPMEG00000016987	ercc3	99	87.949	ENSFCAG00000006989	ERCC3	96	88.918	Felis_catus
ENSPMEG00000016987	ercc3	99	86.118	ENSFALG00000003936	ERCC3	96	87.318	Ficedula_albicollis
ENSPMEG00000016987	ercc3	100	86.260	ENSFDAG00000011924	ERCC3	96	88.095	Fukomys_damarensis
ENSPMEG00000016987	ercc3	100	95.913	ENSFHEG00000005185	ercc3	100	95.913	Fundulus_heteroclitus
ENSPMEG00000016987	ercc3	100	88.761	ENSGMOG00000018032	ercc3	97	89.193	Gadus_morhua
ENSPMEG00000016987	ercc3	97	87.302	ENSGALG00000011515	ERCC3	97	87.302	Gallus_gallus
ENSPMEG00000016987	ercc3	100	98.084	ENSGAFG00000011936	ercc3	100	98.084	Gambusia_affinis
ENSPMEG00000016987	ercc3	100	92.102	ENSGACG00000015218	ercc3	99	93.544	Gasterosteus_aculeatus
ENSPMEG00000016987	ercc3	92	89.058	ENSGAGG00000018579	ERCC3	100	89.058	Gopherus_agassizii
ENSPMEG00000016987	ercc3	100	88.041	ENSGGOG00000015255	ERCC3	96	89.683	Gorilla_gorilla
ENSPMEG00000016987	ercc3	100	94.636	ENSHBUG00000003818	ercc3	98	95.052	Haplochromis_burtoni
ENSPMEG00000016987	ercc3	100	87.023	ENSHGLG00000011014	ERCC3	96	88.757	Heterocephalus_glaber_female
ENSPMEG00000016987	ercc3	100	87.023	ENSHGLG00100013806	ERCC3	96	88.757	Heterocephalus_glaber_male
ENSPMEG00000016987	ercc3	100	91.826	ENSHCOG00000016924	ercc3	98	92.188	Hippocampus_comes
ENSPMEG00000016987	ercc3	100	91.549	ENSIPUG00000021000	ercc3	98	92.047	Ictalurus_punctatus
ENSPMEG00000016987	ercc3	100	87.277	ENSSTOG00000011001	ERCC3	96	89.021	Ictidomys_tridecemlineatus
ENSPMEG00000016987	ercc3	91	88.011	ENSJJAG00000001117	Ercc3	100	88.011	Jaculus_jaculus
ENSPMEG00000016987	ercc3	100	94.125	ENSKMAG00000021764	ercc3	98	94.661	Kryptolebias_marmoratus
ENSPMEG00000016987	ercc3	100	92.848	ENSLBEG00000000468	ercc3	98	93.490	Labrus_bergylta
ENSPMEG00000016987	ercc3	97	84.094	ENSLACG00000014815	ERCC3	96	84.094	Latimeria_chalumnae
ENSPMEG00000016987	ercc3	90	88.559	ENSLOCG00000010907	ercc3	87	88.559	Lepisosteus_oculatus
ENSPMEG00000016987	ercc3	99	87.949	ENSLAFG00000014866	ERCC3	96	89.153	Loxodonta_africana
ENSPMEG00000016987	ercc3	100	88.041	ENSMFAG00000003370	ERCC3	96	89.683	Macaca_fascicularis
ENSPMEG00000016987	ercc3	100	84.296	ENSMNEG00000004215	ERCC3	96	85.770	Macaca_nemestrina
ENSPMEG00000016987	ercc3	100	88.041	ENSMLEG00000042061	ERCC3	96	89.683	Mandrillus_leucophaeus
ENSPMEG00000016987	ercc3	100	93.614	ENSMAMG00000004505	ercc3	98	94.141	Mastacembelus_armatus
ENSPMEG00000016987	ercc3	100	94.636	ENSMZEG00005004854	ercc3	98	95.052	Maylandia_zebra
ENSPMEG00000016987	ercc3	91	88.136	ENSMGAG00000011706	ERCC3	100	88.136	Meleagris_gallopavo
ENSPMEG00000016987	ercc3	100	87.166	ENSMAUG00000004515	Ercc3	96	89.036	Mesocricetus_auratus
ENSPMEG00000016987	ercc3	100	87.150	ENSMICG00000009578	ERCC3	96	88.889	Microcebus_murinus
ENSPMEG00000016987	ercc3	100	87.659	ENSMOCG00000021767	Ercc3	96	89.286	Microtus_ochrogaster
ENSPMEG00000016987	ercc3	99	92.377	ENSMMOG00000018174	ercc3	98	92.708	Mola_mola
ENSPMEG00000016987	ercc3	97	89.418	ENSMODG00000018695	ERCC3	96	89.418	Monodelphis_domestica
ENSPMEG00000016987	ercc3	100	93.350	ENSMALG00000014944	ercc3	98	93.620	Monopterus_albus
ENSPMEG00000016987	ercc3	100	87.913	MGP_CAROLIEiJ_G0022075	Ercc3	96	89.314	Mus_caroli
ENSPMEG00000016987	ercc3	100	87.405	ENSMUSG00000024382	Ercc3	96	88.786	Mus_musculus
ENSPMEG00000016987	ercc3	100	87.659	MGP_PahariEiJ_G0018809	Ercc3	96	89.286	Mus_pahari
ENSPMEG00000016987	ercc3	100	87.277	MGP_SPRETEiJ_G0022987	Ercc3	96	88.654	Mus_spretus
ENSPMEG00000016987	ercc3	99	88.077	ENSMPUG00000012021	ERCC3	96	88.918	Mustela_putorius_furo
ENSPMEG00000016987	ercc3	93	85.205	ENSMLUG00000007429	ERCC3	99	85.205	Myotis_lucifugus
ENSPMEG00000016987	ercc3	97	86.649	ENSNGAG00000019598	Ercc3	97	90.153	Nannospalax_galili
ENSPMEG00000016987	ercc3	100	94.636	ENSNBRG00000019074	ercc3	98	95.052	Neolamprologus_brichardi
ENSPMEG00000016987	ercc3	92	87.500	ENSNLEG00000015665	ERCC3	97	87.500	Nomascus_leucogenys
ENSPMEG00000016987	ercc3	100	86.260	ENSOPRG00000004553	ERCC3	96	87.434	Ochotona_princeps
ENSPMEG00000016987	ercc3	100	87.532	ENSODEG00000005795	ERCC3	96	89.418	Octodon_degus
ENSPMEG00000016987	ercc3	100	94.891	ENSONIG00000003255	ercc3	98	95.182	Oreochromis_niloticus
ENSPMEG00000016987	ercc3	100	87.277	ENSOCUG00000002248	ERCC3	96	89.153	Oryctolagus_cuniculus
ENSPMEG00000016987	ercc3	100	92.465	ENSORLG00000004393	ercc3	98	93.099	Oryzias_latipes
ENSPMEG00000016987	ercc3	100	92.219	ENSORLG00020017718	ercc3	98	93.229	Oryzias_latipes_hni
ENSPMEG00000016987	ercc3	100	92.593	ENSORLG00015015695	ercc3	98	93.229	Oryzias_latipes_hsok
ENSPMEG00000016987	ercc3	100	93.231	ENSOMEG00000015374	ercc3	98	93.750	Oryzias_melastigma
ENSPMEG00000016987	ercc3	100	87.310	ENSOGAG00000009103	ERCC3	96	89.050	Otolemur_garnettii
ENSPMEG00000016987	ercc3	100	87.532	ENSOARG00000016147	ERCC3	96	88.889	Ovis_aries
ENSPMEG00000016987	ercc3	100	88.041	ENSPPAG00000036166	ERCC3	96	89.683	Pan_paniscus
ENSPMEG00000016987	ercc3	99	88.077	ENSPPRG00000001305	ERCC3	96	89.050	Panthera_pardus
ENSPMEG00000016987	ercc3	92	89.474	ENSPTIG00000016969	ERCC3	100	89.474	Panthera_tigris_altaica
ENSPMEG00000016987	ercc3	100	88.041	ENSPTRG00000046940	ERCC3	96	89.683	Pan_troglodytes
ENSPMEG00000016987	ercc3	100	88.041	ENSPANG00000007699	ERCC3	96	89.683	Papio_anubis
ENSPMEG00000016987	ercc3	100	89.668	ENSPKIG00000001319	ercc3	99	91.391	Paramormyrops_kingsleyae
ENSPMEG00000016987	ercc3	92	88.781	ENSPSIG00000014682	ERCC3	100	88.781	Pelodiscus_sinensis
ENSPMEG00000016987	ercc3	97	93.642	ENSPMGG00000017885	ercc3	98	93.229	Periophthalmus_magnuspinnatus
ENSPMEG00000016987	ercc3	100	88.041	ENSPEMG00000013733	Ercc3	96	89.683	Peromyscus_maniculatus_bairdii
ENSPMEG00000016987	ercc3	91	78.711	ENSPMAG00000005081	ercc3	99	78.711	Petromyzon_marinus
ENSPMEG00000016987	ercc3	99	88.674	ENSPCIG00000011821	ERCC3	96	89.418	Phascolarctos_cinereus
ENSPMEG00000016987	ercc3	100	100.000	ENSPFOG00000015604	ercc3	100	100.000	Poecilia_formosa
ENSPMEG00000016987	ercc3	100	97.315	ENSPLAG00000022245	ercc3	100	99.723	Poecilia_latipinna
ENSPMEG00000016987	ercc3	100	98.595	ENSPREG00000020921	ercc3	100	98.595	Poecilia_reticulata
ENSPMEG00000016987	ercc3	100	87.294	ENSPPYG00000012769	ERCC3	96	88.904	Pongo_abelii
ENSPMEG00000016987	ercc3	100	87.786	ENSPCOG00000024903	ERCC3	96	89.286	Propithecus_coquereli
ENSPMEG00000016987	ercc3	90	88.372	ENSPVAG00000013774	ERCC3	86	88.372	Pteropus_vampyrus
ENSPMEG00000016987	ercc3	100	94.636	ENSPNYG00000001208	ercc3	98	95.052	Pundamilia_nyererei
ENSPMEG00000016987	ercc3	100	91.315	ENSPNAG00000005748	ercc3	98	91.797	Pygocentrus_nattereri
ENSPMEG00000016987	ercc3	100	88.041	ENSRNOG00000013180	Ercc3	96	89.683	Rattus_norvegicus
ENSPMEG00000016987	ercc3	100	88.041	ENSRBIG00000027692	ERCC3	96	89.683	Rhinopithecus_bieti
ENSPMEG00000016987	ercc3	100	88.041	ENSRROG00000040673	ERCC3	96	89.683	Rhinopithecus_roxellana
ENSPMEG00000016987	ercc3	92	56.098	YIL143C	SSL2	85	55.094	Saccharomyces_cerevisiae
ENSPMEG00000016987	ercc3	100	87.659	ENSSBOG00000023079	ERCC3	96	89.286	Saimiri_boliviensis_boliviensis
ENSPMEG00000016987	ercc3	97	89.286	ENSSHAG00000007423	ERCC3	96	89.286	Sarcophilus_harrisii
ENSPMEG00000016987	ercc3	97	90.861	ENSSFOG00015012753	ercc3	96	90.861	Scleropages_formosus
ENSPMEG00000016987	ercc3	100	92.484	ENSSMAG00000011915	ercc3	96	94.048	Scophthalmus_maximus
ENSPMEG00000016987	ercc3	100	94.253	ENSSDUG00000021181	ercc3	98	94.792	Seriola_dumerili
ENSPMEG00000016987	ercc3	100	94.508	ENSSLDG00000008744	ercc3	96	95.052	Seriola_lalandi_dorsalis
ENSPMEG00000016987	ercc3	56	80.460	ENSSARG00000000751	-	85	80.460	Sorex_araneus
ENSPMEG00000016987	ercc3	91	87.429	ENSSPUG00000015183	ERCC3	91	87.429	Sphenodon_punctatus
ENSPMEG00000016987	ercc3	100	95.019	ENSSPAG00000004748	ercc3	98	95.443	Stegastes_partitus
ENSPMEG00000016987	ercc3	99	87.821	ENSSSCG00000015721	ERCC3	96	89.030	Sus_scrofa
ENSPMEG00000016987	ercc3	99	88.015	ENSTGUG00000004920	-	97	89.153	Taeniopygia_guttata
ENSPMEG00000016987	ercc3	100	92.848	ENSTRUG00000017185	ercc3	97	93.775	Takifugu_rubripes
ENSPMEG00000016987	ercc3	98	90.980	ENSTNIG00000005457	ercc3	99	91.391	Tetraodon_nigroviridis
ENSPMEG00000016987	ercc3	81	88.712	ENSTBEG00000009381	ERCC3	81	88.712	Tupaia_belangeri
ENSPMEG00000016987	ercc3	68	93.396	ENSUAMG00000009589	-	100	93.396	Ursus_americanus
ENSPMEG00000016987	ercc3	99	88.077	ENSUMAG00000008361	ERCC3	96	88.918	Ursus_maritimus
ENSPMEG00000016987	ercc3	92	89.335	ENSVVUG00000010431	ERCC3	100	89.335	Vulpes_vulpes
ENSPMEG00000016987	ercc3	100	86.946	ENSXETG00000033646	ercc3	96	88.158	Xenopus_tropicalis
ENSPMEG00000016987	ercc3	99	98.062	ENSXCOG00000001791	ercc3	99	98.062	Xiphophorus_couchianus
ENSPMEG00000016987	ercc3	100	98.723	ENSXMAG00000003641	ercc3	100	98.723	Xiphophorus_maculatus