EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMEG00000017081 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Minus strand
Length: 2191 bases
Position: chrKQ551421.1:28804-30994
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000030559	MMR_HSR1	PF01926.23	0.00017	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000032675	-	480	-	ENSPMEP00000030559	159 (aa)	-	-

Gene Model

Click here to download ENSPMEG00000017081's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000017081's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMEG00000017081	-	90	38.750	ENSPMEG00000022138	arl5a	89	38.750
ENSPMEG00000017081	-	82	38.519	ENSPMEG00000016831	sar1b	79	39.048
ENSPMEG00000017081	-	75	35.537	ENSPMEG00000000559	sar1ab	61	35.537
ENSPMEG00000017081	-	77	48.438	ENSPMEG00000007028	arl4cb	64	48.438
ENSPMEG00000017081	-	71	30.252	ENSPMEG00000021947	rab35b	58	30.252
ENSPMEG00000017081	-	78	59.677	ENSPMEG00000005938	arl1	66	59.677
ENSPMEG00000017081	-	70	30.833	ENSPMEG00000002054	rab1ba	58	30.833
ENSPMEG00000017081	-	89	40.994	ENSPMEG00000007916	arl3l2	89	40.994
ENSPMEG00000017081	-	72	30.081	ENSPMEG00000011336	rab5c	54	30.081
ENSPMEG00000017081	-	81	71.875	ENSPMEG00000020422	arf3b	71	71.875
ENSPMEG00000017081	-	70	30.833	ENSPMEG00000005288	-	57	30.833
ENSPMEG00000017081	-	77	37.398	ENSPMEG00000009058	arl8ba	66	37.398
ENSPMEG00000017081	-	74	36.364	ENSPMEG00000001717	-	61	36.364
ENSPMEG00000017081	-	81	71.875	ENSPMEG00000012201	-	71	71.875
ENSPMEG00000017081	-	75	37.190	ENSPMEG00000017237	arl8a	65	37.190
ENSPMEG00000017081	-	85	45.752	ENSPMEG00000009877	arl2	83	45.752
ENSPMEG00000017081	-	74	30.469	ENSPMEG00000007238	rab5aa	57	30.469
ENSPMEG00000017081	-	75	46.218	ENSPMEG00000017082	-	65	46.218
ENSPMEG00000017081	-	75	31.538	ENSPMEG00000003743	rab22a	64	31.538
ENSPMEG00000017081	-	80	66.412	ENSPMEG00000007064	-	73	66.412
ENSPMEG00000017081	-	79	70.635	ENSPMEG00000024077	-	70	70.635
ENSPMEG00000017081	-	77	39.024	ENSPMEG00000004015	arl8bb	66	39.024
ENSPMEG00000017081	-	81	68.217	ENSPMEG00000009605	arf5	72	68.217
ENSPMEG00000017081	-	73	49.138	ENSPMEG00000008907	arl3	64	49.138
ENSPMEG00000017081	-	92	39.521	ENSPMEG00000022283	arl8	93	39.521
ENSPMEG00000017081	-	81	71.970	ENSPMEG00000009906	-	74	71.970
ENSPMEG00000017081	-	74	40.164	ENSPMEG00000014418	-	62	40.164
ENSPMEG00000017081	-	79	44.928	ENSPMEG00000021972	arl4d	69	44.928
ENSPMEG00000017081	-	81	71.094	ENSPMEG00000022942	arf2b	71	71.094
ENSPMEG00000017081	-	77	33.846	ENSPMEG00000013451	arfrp1	64	34.375
ENSPMEG00000017081	-	81	68.217	ENSPMEG00000004624	-	72	68.217
ENSPMEG00000017081	-	74	44.262	ENSPMEG00000008489	ARL6	66	44.262
ENSPMEG00000017081	-	86	40.580	ENSPMEG00000000631	arl5c	78	40.580
ENSPMEG00000017081	-	82	38.926	ENSPMEG00000011461	arl11	94	38.926
ENSPMEG00000017081	-	74	52.941	ENSPMEG00000008427	-	57	52.941

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000017081	-	86	95.588	ENSATEG00000000391	-	84	95.588	Anabas_testudineus
ENSPMEG00000017081	-	86	95.588	ENSACLG00000022869	-	86	95.588	Astatotilapia_calliptera
ENSPMEG00000017081	-	86	95.588	ENSELUG00000000436	-	86	95.588	Esox_lucius
ENSPMEG00000017081	-	86	95.588	ENSIPUG00000020344	-	84	95.588	Ictalurus_punctatus
ENSPMEG00000017081	-	86	95.588	ENSONIG00000000864	-	87	95.588	Oreochromis_niloticus
ENSPMEG00000017081	-	86	94.853	ENSORLG00015004028	-	87	94.853	Oryzias_latipes_hsok
ENSPMEG00000017081	-	86	95.588	ENSOMEG00000022678	-	83	95.588	Oryzias_melastigma
ENSPMEG00000017081	-	86	95.588	ENSPLAG00000007217	-	93	95.588	Poecilia_latipinna
ENSPMEG00000017081	-	86	91.176	ENSTRUG00000020509	-	70	91.176	Takifugu_rubripes
ENSPMEG00000017081	-	86	94.853	ENSTRUG00000024749	-	97	94.853	Takifugu_rubripes
ENSPMEG00000017081	-	86	95.588	ENSXMAG00000028437	-	90	95.588	Xiphophorus_maculatus