EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMEG00000017227 (Gene tree)
Gene ID: 106924694
Gene Symbol: -
Alias: -
Full Name: ataxin-2-like protein
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Minus strand
Length: 28053 bases
Position: chrKQ551698.1:164158-192210
Accession: 106924694
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000014794	PAM2	PF07145.15	3.3e-05	1	1
ENSPMEP00000014803	PAM2	PF07145.15	3.4e-05	1	1
ENSPMEP00000014794	LsmAD	PF06741.13	7.6e-18	1	1
ENSPMEP00000014803	LsmAD	PF06741.13	7.8e-18	1	1
ENSPMEP00000014794	SM-ATX	PF14438.6	5.7e-20	1	1
ENSPMEP00000014803	SM-ATX	PF14438.6	5.8e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000022895	-	5474	-	ENSPMEP00000014794	998 (aa)	-	-
ENSPMET00000022891	-	6470	XM_014998526	ENSPMEP00000014803	1015 (aa)	XP_014854012	UPI00072E1AF8

Gene Model

Click here to download ENSPMEG00000017227's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000017227's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000017227	-	84	64.419	ENSG00000168488	ATXN2L	100	62.766	Homo_sapiens
ENSPMEG00000017227	-	100	82.495	ENSAPOG00000021412	-	98	82.012	Acanthochromis_polyacanthus
ENSPMEG00000017227	-	97	40.000	ENSAMEG00000015502	ATXN2L	56	64.419	Ailuropoda_melanoleuca
ENSPMEG00000017227	-	96	45.672	ENSACIG00000024435	atxn2l	52	52.941	Amphilophus_citrinellus
ENSPMEG00000017227	-	83	78.697	ENSACIG00000014731	-	96	79.198	Amphilophus_citrinellus
ENSPMEG00000017227	-	91	83.011	ENSAOCG00000002581	-	100	83.871	Amphiprion_ocellaris
ENSPMEG00000017227	-	100	84.429	ENSAPEG00000011038	-	100	84.429	Amphiprion_percula
ENSPMEG00000017227	-	100	83.092	ENSATEG00000019382	-	98	82.319	Anabas_testudineus
ENSPMEG00000017227	-	62	64.419	ENSANAG00000026257	ATXN2L	58	64.419	Aotus_nancymaae
ENSPMEG00000017227	-	100	80.271	ENSACLG00000009975	-	98	79.304	Astatotilapia_calliptera
ENSPMEG00000017227	-	60	66.797	ENSACLG00000016900	atxn2l	89	69.141	Astatotilapia_calliptera
ENSPMEG00000017227	-	99	61.823	ENSAMXG00000020362	-	97	59.528	Astyanax_mexicanus
ENSPMEG00000017227	-	89	75.000	ENSAMXG00000003332	atxn2l	95	75.000	Astyanax_mexicanus
ENSPMEG00000017227	-	84	64.419	ENSCJAG00000006251	ATXN2L	58	64.419	Callithrix_jacchus
ENSPMEG00000017227	-	84	64.419	ENSCAFG00000017174	ATXN2L	57	64.419	Canis_familiaris
ENSPMEG00000017227	-	84	64.419	ENSCAFG00020017576	ATXN2L	55	64.419	Canis_lupus_dingo
ENSPMEG00000017227	-	84	64.419	ENSTSYG00000013854	ATXN2L	58	64.419	Carlito_syrichta
ENSPMEG00000017227	-	84	64.419	ENSCPOG00000010521	ATXN2L	59	35.801	Cavia_porcellus
ENSPMEG00000017227	-	84	64.419	ENSCCAG00000033928	ATXN2L	87	63.137	Cebus_capucinus
ENSPMEG00000017227	-	84	64.419	ENSCLAG00000016117	ATXN2L	95	63.137	Chinchilla_lanigera
ENSPMEG00000017227	-	85	64.045	ENSCGRG00001017114	Atxn2l	60	64.045	Cricetulus_griseus_chok1gshd
ENSPMEG00000017227	-	83	64.045	ENSCGRG00000001500	Atxn2l	66	62.745	Cricetulus_griseus_crigri
ENSPMEG00000017227	-	59	75.581	ENSCSEG00000008530	-	96	77.243	Cynoglossus_semilaevis
ENSPMEG00000017227	-	100	88.932	ENSCVAG00000015825	-	100	88.541	Cyprinodon_variegatus
ENSPMEG00000017227	-	100	55.189	ENSDARG00000011597	atxn2l	98	54.726	Danio_rerio
ENSPMEG00000017227	-	84	64.419	ENSEASG00005014992	ATXN2L	67	64.151	Equus_asinus_asinus
ENSPMEG00000017227	-	85	64.419	ENSECAG00000007301	ATXN2L	58	64.419	Equus_caballus
ENSPMEG00000017227	-	57	55.656	ENSEEUG00000008940	ATXN2L	58	55.656	Erinaceus_europaeus
ENSPMEG00000017227	-	87	64.444	ENSELUG00000022915	-	89	62.636	Esox_lucius
ENSPMEG00000017227	-	99	56.689	ENSELUG00000023740	atxn2l	99	55.176	Esox_lucius
ENSPMEG00000017227	-	67	77.922	ENSFHEG00000004491	-	84	77.345	Fundulus_heteroclitus
ENSPMEG00000017227	-	61	66.504	ENSGMOG00000006016	-	100	64.990	Gadus_morhua
ENSPMEG00000017227	-	60	61.600	ENSGMOG00000000316	atxn2l	63	65.789	Gadus_morhua
ENSPMEG00000017227	-	71	95.598	ENSGAFG00000019364	-	99	95.598	Gambusia_affinis
ENSPMEG00000017227	-	100	76.214	ENSGACG00000007446	-	100	74.038	Gasterosteus_aculeatus
ENSPMEG00000017227	-	58	53.237	ENSGGOG00000036669	-	63	50.566	Gorilla_gorilla
ENSPMEG00000017227	-	100	80.174	ENSHBUG00000007997	-	100	79.207	Haplochromis_burtoni
ENSPMEG00000017227	-	52	53.028	ENSHBUG00000013425	atxn2l	99	49.716	Haplochromis_burtoni
ENSPMEG00000017227	-	77	64.045	ENSHGLG00000010957	ATXN2L	58	64.045	Heterocephalus_glaber_female
ENSPMEG00000017227	-	77	64.045	ENSHGLG00100000705	ATXN2L	66	64.045	Heterocephalus_glaber_male
ENSPMEG00000017227	-	83	79.692	ENSHCOG00000017587	-	61	79.572	Hippocampus_comes
ENSPMEG00000017227	-	100	58.077	ENSIPUG00000001761	atxn2l	97	56.481	Ictalurus_punctatus
ENSPMEG00000017227	-	61	64.419	ENSJJAG00000005629	Atxn2l	55	64.419	Jaculus_jaculus
ENSPMEG00000017227	-	100	83.893	ENSKMAG00000021450	-	100	83.696	Kryptolebias_marmoratus
ENSPMEG00000017227	-	100	78.357	ENSLBEG00000022720	-	98	79.596	Labrus_bergylta
ENSPMEG00000017227	-	100	79.922	ENSMAMG00000013005	-	98	80.116	Mastacembelus_armatus
ENSPMEG00000017227	-	60	66.797	ENSMZEG00005001258	atxn2l	90	69.141	Maylandia_zebra
ENSPMEG00000017227	-	100	80.271	ENSMZEG00005013869	-	98	79.304	Maylandia_zebra
ENSPMEG00000017227	-	84	64.045	ENSMAUG00000011753	Atxn2l	55	64.045	Mesocricetus_auratus
ENSPMEG00000017227	-	55	63.137	ENSMICG00000010608	ATXN2L	68	63.137	Microcebus_murinus
ENSPMEG00000017227	-	83	64.419	ENSMOCG00000020882	Atxn2l	66	63.137	Microtus_ochrogaster
ENSPMEG00000017227	-	85	78.877	ENSMALG00000008430	-	93	78.877	Monopterus_albus
ENSPMEG00000017227	-	84	64.419	MGP_CAROLIEiJ_G0030450	Atxn2l	77	67.647	Mus_caroli
ENSPMEG00000017227	-	84	64.419	ENSMUSG00000032637	Atxn2l	77	67.647	Mus_musculus
ENSPMEG00000017227	-	99	41.770	MGP_PahariEiJ_G0013660	Atxn2l	57	63.137	Mus_pahari
ENSPMEG00000017227	-	99	41.865	MGP_SPRETEiJ_G0031564	Atxn2l	77	67.647	Mus_spretus
ENSPMEG00000017227	-	61	64.045	ENSNGAG00000021446	Atxn2l	59	64.045	Nannospalax_galili
ENSPMEG00000017227	-	71	50.591	ENSNBRG00000020833	-	60	52.703	Neolamprologus_brichardi
ENSPMEG00000017227	-	56	76.256	ENSNBRG00000012039	-	55	81.518	Neolamprologus_brichardi
ENSPMEG00000017227	-	84	64.419	ENSNLEG00000011004	ATXN2L	59	64.419	Nomascus_leucogenys
ENSPMEG00000017227	-	75	63.670	ENSMEUG00000011098	ATXN2L	57	63.670	Notamacropus_eugenii
ENSPMEG00000017227	-	66	68.519	ENSONIG00000009388	atxn2l	74	70.370	Oreochromis_niloticus
ENSPMEG00000017227	-	100	81.431	ENSONIG00000011478	-	100	79.594	Oreochromis_niloticus
ENSPMEG00000017227	-	100	79.187	ENSORLG00000006059	-	98	79.324	Oryzias_latipes
ENSPMEG00000017227	-	100	78.937	ENSORLG00020000991	-	98	79.130	Oryzias_latipes_hni
ENSPMEG00000017227	-	100	79.034	ENSORLG00015014174	-	98	79.130	Oryzias_latipes_hsok
ENSPMEG00000017227	-	100	79.864	ENSOMEG00000021118	-	98	79.574	Oryzias_melastigma
ENSPMEG00000017227	-	58	36.419	ENSOGAG00000012596	ATXN2L	58	64.419	Otolemur_garnettii
ENSPMEG00000017227	-	84	64.045	ENSOARG00000002503	ATXN2L	72	62.745	Ovis_aries
ENSPMEG00000017227	-	97	41.804	ENSPPAG00000039107	ATXN2L	65	63.529	Pan_paniscus
ENSPMEG00000017227	-	86	54.317	ENSPPAG00000036236	-	58	55.056	Pan_paniscus
ENSPMEG00000017227	-	99	39.605	ENSPPRG00000013690	ATXN2L	58	63.670	Panthera_pardus
ENSPMEG00000017227	-	99	40.960	ENSPTIG00000015041	ATXN2L	61	63.396	Panthera_tigris_altaica
ENSPMEG00000017227	-	84	64.794	ENSPTRG00000007938	ATXN2L	60	64.794	Pan_troglodytes
ENSPMEG00000017227	-	72	78.689	ENSPMGG00000014821	-	97	70.332	Periophthalmus_magnuspinnatus
ENSPMEG00000017227	-	84	64.419	ENSPEMG00000019231	Atxn2l	60	64.419	Peromyscus_maniculatus_bairdii
ENSPMEG00000017227	-	78	64.419	ENSPCIG00000025207	ATXN2L	58	64.419	Phascolarctos_cinereus
ENSPMEG00000017227	-	100	99.901	ENSPFOG00000005935	-	100	99.901	Poecilia_formosa
ENSPMEG00000017227	-	100	98.719	ENSPLAG00000017094	-	100	98.719	Poecilia_latipinna
ENSPMEG00000017227	-	100	98.328	ENSPREG00000023090	-	100	98.328	Poecilia_reticulata
ENSPMEG00000017227	-	84	64.419	ENSPCOG00000024791	ATXN2L	59	64.419	Propithecus_coquereli
ENSPMEG00000017227	-	84	53.276	ENSPNYG00000012482	atxn2l	93	52.691	Pundamilia_nyererei
ENSPMEG00000017227	-	100	80.271	ENSPNYG00000017058	-	98	79.304	Pundamilia_nyererei
ENSPMEG00000017227	-	100	58.122	ENSPNAG00000014538	atxn2l	99	57.212	Pygocentrus_nattereri
ENSPMEG00000017227	-	99	59.885	ENSPNAG00000023685	-	98	58.700	Pygocentrus_nattereri
ENSPMEG00000017227	-	84	64.151	ENSSBOG00000025782	ATXN2L	63	64.151	Saimiri_boliviensis_boliviensis
ENSPMEG00000017227	-	72	63.529	ENSSHAG00000012015	ATXN2L	64	63.529	Sarcophilus_harrisii
ENSPMEG00000017227	-	75	67.391	ENSSFOG00015021588	-	82	62.530	Scleropages_formosus
ENSPMEG00000017227	-	100	55.888	ENSSFOG00015001018	atxn2l	99	54.002	Scleropages_formosus
ENSPMEG00000017227	-	100	81.528	ENSSMAG00000016932	-	98	81.044	Scophthalmus_maximus
ENSPMEG00000017227	-	88	53.745	ENSSMAG00000016365	atxn2l	95	51.556	Scophthalmus_maximus
ENSPMEG00000017227	-	100	84.333	ENSSDUG00000023014	-	100	84.333	Seriola_dumerili
ENSPMEG00000017227	-	85	92.339	ENSSLDG00000017701	-	96	92.339	Seriola_lalandi_dorsalis
ENSPMEG00000017227	-	82	61.382	ENSSARG00000009732	ATXN2L	60	61.382	Sorex_araneus
ENSPMEG00000017227	-	100	82.739	ENSSPAG00000008174	-	98	82.546	Stegastes_partitus
ENSPMEG00000017227	-	99	79.902	ENSTRUG00000007132	-	98	80.136	Takifugu_rubripes
ENSPMEG00000017227	-	100	77.789	ENSTNIG00000018942	-	100	77.401	Tetraodon_nigroviridis
ENSPMEG00000017227	-	95	51.456	ENSUMAG00000009437	ATXN2L	77	64.151	Ursus_maritimus
ENSPMEG00000017227	-	82	64.419	ENSVVUG00000024239	ATXN2L	68	63.137	Vulpes_vulpes
ENSPMEG00000017227	-	99	37.850	ENSXETG00000014990	atxn2l	57	60.300	Xenopus_tropicalis
ENSPMEG00000017227	-	82	90.102	ENSXCOG00000001128	-	99	88.608	Xiphophorus_couchianus
ENSPMEG00000017227	-	100	94.510	ENSXMAG00000010133	-	100	94.510	Xiphophorus_maculatus