EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMEG00000017281 (Gene tree)
Gene ID: 106932713
Gene Symbol: lsg1
Alias: -
Full Name: large 60S subunit nuclear export GTPase 1
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Minus strand
Length: 4509 bases
Position: chrKQ551043.1:634453-638961
Accession: 106932713
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000014699	MMR_HSR1	PF01926.23	3.6e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000022756	-	1902	XM_015011550	ENSPMEP00000014699	633 (aa)	XP_014867036	-
ENSPMET00000022690	-	1845	-	ENSPMEP00000014628	614 (aa)	-	-

Gene Model

Click here to download ENSPMEG00000017281's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000017281's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000017281	lsg1	99	65.517	ENSG00000041802	LSG1	88	78.344	Homo_sapiens
ENSPMEG00000017281	lsg1	100	78.783	ENSAPOG00000009694	lsg1	98	79.040	Acanthochromis_polyacanthus
ENSPMEG00000017281	lsg1	99	62.426	ENSAMEG00000009343	LSG1	97	64.241	Ailuropoda_melanoleuca
ENSPMEG00000017281	lsg1	98	79.585	ENSACIG00000012406	lsg1	97	79.487	Amphilophus_citrinellus
ENSPMEG00000017281	lsg1	100	79.251	ENSAOCG00000016066	lsg1	98	80.000	Amphiprion_ocellaris
ENSPMEG00000017281	lsg1	100	78.783	ENSAPEG00000003252	lsg1	98	79.520	Amphiprion_percula
ENSPMEG00000017281	lsg1	98	81.949	ENSATEG00000011794	lsg1	97	81.701	Anabas_testudineus
ENSPMEG00000017281	lsg1	94	61.120	ENSACAG00000004222	LSG1	99	60.443	Anolis_carolinensis
ENSPMEG00000017281	lsg1	99	65.165	ENSANAG00000021153	LSG1	97	65.379	Aotus_nancymaae
ENSPMEG00000017281	lsg1	100	80.858	ENSACLG00000000520	lsg1	98	80.534	Astatotilapia_calliptera
ENSPMEG00000017281	lsg1	99	72.111	ENSAMXG00000008271	lsg1	98	71.924	Astyanax_mexicanus
ENSPMEG00000017281	lsg1	99	65.502	ENSBTAG00000008461	LSG1	97	66.147	Bos_taurus
ENSPMEG00000017281	lsg1	75	46.396	WBGene00016907	C53H9.2	82	52.593	Caenorhabditis_elegans
ENSPMEG00000017281	lsg1	99	64.768	ENSCJAG00000013962	LSG1	97	64.606	Callithrix_jacchus
ENSPMEG00000017281	lsg1	95	65.183	ENSCAFG00000013445	LSG1	99	65.127	Canis_familiaris
ENSPMEG00000017281	lsg1	99	64.404	ENSCAFG00020002216	LSG1	99	64.904	Canis_lupus_dingo
ENSPMEG00000017281	lsg1	99	65.496	ENSCHIG00000015769	LSG1	97	65.773	Capra_hircus
ENSPMEG00000017281	lsg1	99	63.731	ENSTSYG00000001447	LSG1	97	64.012	Carlito_syrichta
ENSPMEG00000017281	lsg1	95	64.812	ENSCAPG00000009856	LSG1	99	64.812	Cavia_aperea
ENSPMEG00000017281	lsg1	99	64.114	ENSCCAG00000035744	LSG1	97	64.407	Cebus_capucinus
ENSPMEG00000017281	lsg1	99	65.817	ENSCATG00000042060	LSG1	97	64.670	Cercocebus_atys
ENSPMEG00000017281	lsg1	99	65.517	ENSCSAG00000008796	LSG1	89	65.644	Chlorocebus_sabaeus
ENSPMEG00000017281	lsg1	100	65.616	ENSCPBG00000015941	LSG1	81	66.204	Chrysemys_picta_bellii
ENSPMEG00000017281	lsg1	75	52.966	ENSCING00000007079	-	92	58.586	Ciona_intestinalis
ENSPMEG00000017281	lsg1	79	51.894	ENSCSAVG00000002514	-	96	52.016	Ciona_savignyi
ENSPMEG00000017281	lsg1	99	65.067	ENSCANG00000030709	LSG1	97	65.224	Colobus_angolensis_palliatus
ENSPMEG00000017281	lsg1	99	65.789	ENSCGRG00001019846	Lsg1	97	65.873	Cricetulus_griseus_chok1gshd
ENSPMEG00000017281	lsg1	99	65.244	ENSCGRG00000014617	Lsg1	97	65.469	Cricetulus_griseus_crigri
ENSPMEG00000017281	lsg1	98	75.776	ENSCSEG00000008522	lsg1	97	75.469	Cynoglossus_semilaevis
ENSPMEG00000017281	lsg1	97	86.334	ENSCVAG00000002484	lsg1	97	86.334	Cyprinodon_variegatus
ENSPMEG00000017281	lsg1	100	73.988	ENSDARG00000015352	lsg1	97	73.440	Danio_rerio
ENSPMEG00000017281	lsg1	99	64.394	ENSDNOG00000006224	LSG1	97	63.820	Dasypus_novemcinctus
ENSPMEG00000017281	lsg1	99	48.834	FBgn0266284	Ns3	95	48.940	Drosophila_melanogaster
ENSPMEG00000017281	lsg1	88	74.667	ENSETEG00000003888	LSG1	87	77.966	Echinops_telfairi
ENSPMEG00000017281	lsg1	90	55.116	ENSEBUG00000003119	lsg1	86	55.150	Eptatretus_burgeri
ENSPMEG00000017281	lsg1	99	64.414	ENSEASG00005000678	LSG1	97	64.625	Equus_asinus_asinus
ENSPMEG00000017281	lsg1	99	64.574	ENSECAG00000017659	LSG1	97	64.472	Equus_caballus
ENSPMEG00000017281	lsg1	86	58.621	ENSEEUG00000015217	LSG1	75	58.621	Erinaceus_europaeus
ENSPMEG00000017281	lsg1	100	71.889	ENSELUG00000023973	lsg1	98	72.283	Esox_lucius
ENSPMEG00000017281	lsg1	99	64.350	ENSFCAG00000024957	LSG1	97	64.496	Felis_catus
ENSPMEG00000017281	lsg1	92	63.023	ENSFALG00000007210	LSG1	94	62.862	Ficedula_albicollis
ENSPMEG00000017281	lsg1	99	63.664	ENSFDAG00000017373	LSG1	97	65.245	Fukomys_damarensis
ENSPMEG00000017281	lsg1	97	86.922	ENSFHEG00000003680	lsg1	97	86.922	Fundulus_heteroclitus
ENSPMEG00000017281	lsg1	98	68.203	ENSGMOG00000015834	lsg1	97	68.371	Gadus_morhua
ENSPMEG00000017281	lsg1	99	60.301	ENSGALG00000007058	LSG1	86	60.620	Gallus_gallus
ENSPMEG00000017281	lsg1	97	92.444	ENSGAFG00000015831	lsg1	97	92.444	Gambusia_affinis
ENSPMEG00000017281	lsg1	98	77.848	ENSGACG00000009323	lsg1	97	77.742	Gasterosteus_aculeatus
ENSPMEG00000017281	lsg1	99	65.460	ENSGGOG00000000520	LSG1	97	65.533	Gorilla_gorilla
ENSPMEG00000017281	lsg1	100	81.860	ENSHBUG00000005659	lsg1	98	81.558	Haplochromis_burtoni
ENSPMEG00000017281	lsg1	99	63.134	ENSHGLG00000017390	LSG1	97	63.981	Heterocephalus_glaber_female
ENSPMEG00000017281	lsg1	99	63.134	ENSHGLG00100018587	LSG1	97	63.981	Heterocephalus_glaber_male
ENSPMEG00000017281	lsg1	97	77.338	ENSHCOG00000016848	lsg1	97	77.338	Hippocampus_comes
ENSPMEG00000017281	lsg1	100	72.500	ENSIPUG00000008631	lsg1	97	72.568	Ictalurus_punctatus
ENSPMEG00000017281	lsg1	73	61.396	ENSSTOG00000010234	LSG1	90	60.404	Ictidomys_tridecemlineatus
ENSPMEG00000017281	lsg1	99	65.426	ENSJJAG00000015513	Lsg1	97	65.823	Jaculus_jaculus
ENSPMEG00000017281	lsg1	98	78.435	ENSKMAG00000009681	lsg1	97	78.491	Kryptolebias_marmoratus
ENSPMEG00000017281	lsg1	98	76.000	ENSLBEG00000024261	lsg1	97	76.886	Labrus_bergylta
ENSPMEG00000017281	lsg1	100	64.232	ENSLACG00000013399	LSG1	98	64.733	Latimeria_chalumnae
ENSPMEG00000017281	lsg1	98	69.673	ENSLOCG00000004918	lsg1	97	71.339	Lepisosteus_oculatus
ENSPMEG00000017281	lsg1	99	65.854	ENSLAFG00000012919	-	97	66.044	Loxodonta_africana
ENSPMEG00000017281	lsg1	99	65.667	ENSMFAG00000039903	LSG1	97	64.670	Macaca_fascicularis
ENSPMEG00000017281	lsg1	99	65.667	ENSMMUG00000010708	LSG1	97	65.798	Macaca_mulatta
ENSPMEG00000017281	lsg1	99	65.667	ENSMNEG00000031538	LSG1	97	64.670	Macaca_nemestrina
ENSPMEG00000017281	lsg1	99	65.517	ENSMLEG00000041184	LSG1	97	65.798	Mandrillus_leucophaeus
ENSPMEG00000017281	lsg1	100	76.827	ENSMAMG00000000470	lsg1	98	77.033	Mastacembelus_armatus
ENSPMEG00000017281	lsg1	100	81.860	ENSMZEG00005017865	lsg1	98	81.558	Maylandia_zebra
ENSPMEG00000017281	lsg1	88	61.630	ENSMGAG00000007050	LSG1	99	61.121	Meleagris_gallopavo
ENSPMEG00000017281	lsg1	91	64.805	ENSMAUG00000016976	Lsg1	90	65.445	Mesocricetus_auratus
ENSPMEG00000017281	lsg1	99	62.946	ENSMICG00000049087	LSG1	97	63.426	Microcebus_murinus
ENSPMEG00000017281	lsg1	99	63.678	ENSMOCG00000022136	Lsg1	97	64.330	Microtus_ochrogaster
ENSPMEG00000017281	lsg1	86	88.333	ENSMMOG00000008884	lsg1	97	73.955	Mola_mola
ENSPMEG00000017281	lsg1	99	55.453	ENSMODG00000019828	LSG1	97	55.140	Monodelphis_domestica
ENSPMEG00000017281	lsg1	99	66.049	MGP_CAROLIEiJ_G0020648	Lsg1	97	66.456	Mus_caroli
ENSPMEG00000017281	lsg1	99	65.391	ENSMUSG00000022538	Lsg1	97	66.142	Mus_musculus
ENSPMEG00000017281	lsg1	98	66.459	MGP_PahariEiJ_G0016352	Lsg1	97	66.195	Mus_pahari
ENSPMEG00000017281	lsg1	99	66.204	MGP_SPRETEiJ_G0021544	Lsg1	97	66.297	Mus_spretus
ENSPMEG00000017281	lsg1	99	64.804	ENSMPUG00000003734	LSG1	97	64.961	Mustela_putorius_furo
ENSPMEG00000017281	lsg1	99	65.396	ENSMLUG00000012548	LSG1	97	65.156	Myotis_lucifugus
ENSPMEG00000017281	lsg1	99	64.079	ENSNGAG00000021872	Lsg1	97	64.890	Nannospalax_galili
ENSPMEG00000017281	lsg1	99	64.865	ENSNLEG00000008293	LSG1	97	64.724	Nomascus_leucogenys
ENSPMEG00000017281	lsg1	69	70.103	ENSMEUG00000009041	-	85	70.103	Notamacropus_eugenii
ENSPMEG00000017281	lsg1	100	81.385	ENSONIG00000002635	lsg1	98	81.230	Oreochromis_niloticus
ENSPMEG00000017281	lsg1	95	66.132	ENSOANG00000012742	LSG1	99	66.292	Ornithorhynchus_anatinus
ENSPMEG00000017281	lsg1	99	64.232	ENSOCUG00000004817	LSG1	97	64.451	Oryctolagus_cuniculus
ENSPMEG00000017281	lsg1	98	79.040	ENSORLG00000007695	lsg1	97	78.880	Oryzias_latipes
ENSPMEG00000017281	lsg1	98	78.537	ENSORLG00020016286	lsg1	97	78.855	Oryzias_latipes_hni
ENSPMEG00000017281	lsg1	98	78.400	ENSORLG00015012025	lsg1	97	78.435	Oryzias_latipes_hsok
ENSPMEG00000017281	lsg1	98	76.837	ENSOMEG00000022379	lsg1	97	76.518	Oryzias_melastigma
ENSPMEG00000017281	lsg1	99	62.870	ENSOGAG00000003475	LSG1	97	63.369	Otolemur_garnettii
ENSPMEG00000017281	lsg1	99	64.502	ENSOARG00000020403	LSG1	97	65.265	Ovis_aries
ENSPMEG00000017281	lsg1	99	65.611	ENSPPAG00000029271	LSG1	97	65.842	Pan_paniscus
ENSPMEG00000017281	lsg1	99	63.623	ENSPPRG00000010281	LSG1	97	63.804	Panthera_pardus
ENSPMEG00000017281	lsg1	99	64.297	ENSPTIG00000010789	LSG1	97	64.496	Panthera_tigris_altaica
ENSPMEG00000017281	lsg1	99	65.460	ENSPTRG00000015760	LSG1	97	65.688	Pan_troglodytes
ENSPMEG00000017281	lsg1	99	65.217	ENSPANG00000018249	LSG1	97	64.209	Papio_anubis
ENSPMEG00000017281	lsg1	99	71.963	ENSPKIG00000002895	lsg1	97	72.800	Paramormyrops_kingsleyae
ENSPMEG00000017281	lsg1	96	61.085	ENSPSIG00000009821	LSG1	99	61.085	Pelodiscus_sinensis
ENSPMEG00000017281	lsg1	95	78.773	ENSPMGG00000000931	lsg1	100	78.441	Periophthalmus_magnuspinnatus
ENSPMEG00000017281	lsg1	99	63.885	ENSPEMG00000012082	-	97	63.919	Peromyscus_maniculatus_bairdii
ENSPMEG00000017281	lsg1	99	60.417	ENSPMAG00000007451	lsg1	98	60.366	Petromyzon_marinus
ENSPMEG00000017281	lsg1	98	63.212	ENSPCIG00000013890	LSG1	80	63.542	Phascolarctos_cinereus
ENSPMEG00000017281	lsg1	100	98.746	ENSPFOG00000021882	lsg1	100	98.746	Poecilia_formosa
ENSPMEG00000017281	lsg1	100	97.179	ENSPLAG00000019536	lsg1	100	97.179	Poecilia_latipinna
ENSPMEG00000017281	lsg1	97	82.464	ENSPREG00000006048	lsg1	97	82.622	Poecilia_reticulata
ENSPMEG00000017281	lsg1	92	64.052	ENSPPYG00000014425	LSG1	97	64.094	Pongo_abelii
ENSPMEG00000017281	lsg1	89	72.000	ENSPCAG00000005511	LSG1	87	76.271	Procavia_capensis
ENSPMEG00000017281	lsg1	99	63.499	ENSPCOG00000012360	LSG1	97	62.442	Propithecus_coquereli
ENSPMEG00000017281	lsg1	100	80.858	ENSPNYG00000021994	lsg1	98	80.534	Pundamilia_nyererei
ENSPMEG00000017281	lsg1	100	72.179	ENSPNAG00000015533	lsg1	98	72.108	Pygocentrus_nattereri
ENSPMEG00000017281	lsg1	99	63.814	ENSRNOG00000001727	Lsg1	97	64.861	Rattus_norvegicus
ENSPMEG00000017281	lsg1	99	64.812	ENSRBIG00000029053	LSG1	97	65.284	Rhinopithecus_bieti
ENSPMEG00000017281	lsg1	99	64.812	ENSRROG00000037702	LSG1	97	65.284	Rhinopithecus_roxellana
ENSPMEG00000017281	lsg1	82	40.406	YGL099W	LSG1	70	41.176	Saccharomyces_cerevisiae
ENSPMEG00000017281	lsg1	99	64.715	ENSSBOG00000034938	LSG1	97	65.224	Saimiri_boliviensis_boliviensis
ENSPMEG00000017281	lsg1	78	61.670	ENSSHAG00000003487	LSG1	99	61.568	Sarcophilus_harrisii
ENSPMEG00000017281	lsg1	98	71.406	ENSSFOG00015008955	lsg1	97	72.115	Scleropages_formosus
ENSPMEG00000017281	lsg1	98	80.915	ENSSDUG00000004622	lsg1	98	80.824	Seriola_dumerili
ENSPMEG00000017281	lsg1	98	79.777	ENSSLDG00000010869	lsg1	97	79.680	Seriola_lalandi_dorsalis
ENSPMEG00000017281	lsg1	82	66.082	ENSSARG00000012981	LSG1	72	69.492	Sorex_araneus
ENSPMEG00000017281	lsg1	100	64.848	ENSSPUG00000016347	LSG1	97	64.541	Sphenodon_punctatus
ENSPMEG00000017281	lsg1	100	76.168	ENSSPAG00000005508	lsg1	98	77.600	Stegastes_partitus
ENSPMEG00000017281	lsg1	99	64.110	ENSSSCG00000011827	LSG1	97	64.308	Sus_scrofa
ENSPMEG00000017281	lsg1	88	61.345	ENSTGUG00000009068	LSG1	99	61.345	Taeniopygia_guttata
ENSPMEG00000017281	lsg1	97	73.077	ENSTRUG00000017380	lsg1	97	73.077	Takifugu_rubripes
ENSPMEG00000017281	lsg1	97	77.280	ENSTNIG00000015570	lsg1	97	77.440	Tetraodon_nigroviridis
ENSPMEG00000017281	lsg1	90	69.492	ENSTTRG00000000559	LSG1	89	69.492	Tursiops_truncatus
ENSPMEG00000017281	lsg1	99	63.528	ENSUAMG00000012454	LSG1	97	64.806	Ursus_americanus
ENSPMEG00000017281	lsg1	99	63.528	ENSUMAG00000000855	LSG1	97	64.806	Ursus_maritimus
ENSPMEG00000017281	lsg1	95	61.783	ENSVPAG00000012400	LSG1	99	61.465	Vicugna_pacos
ENSPMEG00000017281	lsg1	95	64.593	ENSVVUG00000008956	LSG1	97	64.377	Vulpes_vulpes
ENSPMEG00000017281	lsg1	100	65.237	ENSXETG00000003451	lsg1	98	65.323	Xenopus_tropicalis
ENSPMEG00000017281	lsg1	97	92.937	ENSXCOG00000003239	lsg1	97	92.937	Xiphophorus_couchianus
ENSPMEG00000017281	lsg1	97	92.936	ENSXMAG00000005536	lsg1	98	92.936	Xiphophorus_maculatus