EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMEG00000017343 (Gene tree)
Gene ID: 106906379
Gene Symbol: smfn
Alias: -
Full Name: RNA exonuclease 2
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Plus strand
Length: 17394 bases
Position: chrKQ553318.1:33216-50609
Accession: 106906379
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000014898	RNase_T	PF00929.24	3.8e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000032784	-	1542	XM_014971635	ENSPMEP00000014898	280 (aa)	XP_014827121	UPI00072E55A4

Gene Model

Click here to download ENSPMEG00000017343's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000017343's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000017343	smfn	72	78.607	ENSG00000076043	REXO2	99	79.032	Homo_sapiens
ENSPMEG00000017343	smfn	72	79.602	ENSAMEG00000013263	REXO2	85	79.602	Ailuropoda_melanoleuca
ENSPMEG00000017343	smfn	66	84.409	ENSACIG00000023553	smfn	100	84.409	Amphilophus_citrinellus
ENSPMEG00000017343	smfn	99	68.817	ENSAPEG00000012435	smfn	99	68.817	Amphiprion_percula
ENSPMEG00000017343	smfn	99	68.478	ENSATEG00000015385	smfn	97	68.478	Anabas_testudineus
ENSPMEG00000017343	smfn	69	76.562	ENSAPLG00000005045	REXO2	94	76.562	Anas_platyrhynchos
ENSPMEG00000017343	smfn	65	70.492	ENSACAG00000011631	REXO2	86	70.492	Anolis_carolinensis
ENSPMEG00000017343	smfn	72	79.104	ENSANAG00000020834	REXO2	85	79.104	Aotus_nancymaae
ENSPMEG00000017343	smfn	80	80.088	ENSACLG00000024566	smfn	95	86.740	Astatotilapia_calliptera
ENSPMEG00000017343	smfn	72	79.602	ENSBTAG00000005843	REXO2	85	79.602	Bos_taurus
ENSPMEG00000017343	smfn	63	49.718	WBGene00007429	C08B6.8	88	55.072	Caenorhabditis_elegans
ENSPMEG00000017343	smfn	72	78.109	ENSCJAG00000012434	REXO2	85	78.109	Callithrix_jacchus
ENSPMEG00000017343	smfn	72	78.607	ENSCAFG00000013511	REXO2	85	78.607	Canis_familiaris
ENSPMEG00000017343	smfn	72	79.602	ENSCAFG00020002513	REXO2	85	79.602	Canis_lupus_dingo
ENSPMEG00000017343	smfn	72	79.602	ENSCHIG00000009264	REXO2	85	79.602	Capra_hircus
ENSPMEG00000017343	smfn	69	68.394	ENSTSYG00000027948	-	99	68.394	Carlito_syrichta
ENSPMEG00000017343	smfn	72	79.104	ENSTSYG00000002237	REXO2	85	79.104	Carlito_syrichta
ENSPMEG00000017343	smfn	66	79.570	ENSCAPG00000006093	REXO2	99	79.570	Cavia_aperea
ENSPMEG00000017343	smfn	73	77.941	ENSCPOG00000010548	REXO2	86	77.941	Cavia_porcellus
ENSPMEG00000017343	smfn	72	79.104	ENSCCAG00000034979	REXO2	85	79.104	Cebus_capucinus
ENSPMEG00000017343	smfn	72	78.607	ENSCATG00000015278	REXO2	85	78.607	Cercocebus_atys
ENSPMEG00000017343	smfn	73	77.941	ENSCLAG00000011195	REXO2	86	77.941	Chinchilla_lanigera
ENSPMEG00000017343	smfn	72	78.607	ENSCSAG00000002754	REXO2	85	78.607	Chlorocebus_sabaeus
ENSPMEG00000017343	smfn	71	78.283	ENSCHOG00000000642	-	84	78.283	Choloepus_hoffmanni
ENSPMEG00000017343	smfn	51	73.427	ENSCPBG00000009359	REXO2	99	73.427	Chrysemys_picta_bellii
ENSPMEG00000017343	smfn	72	53.171	ENSCING00000009858	-	99	53.171	Ciona_intestinalis
ENSPMEG00000017343	smfn	72	78.607	ENSCANG00000034756	REXO2	85	78.607	Colobus_angolensis_palliatus
ENSPMEG00000017343	smfn	71	79.293	ENSCGRG00001013673	-	98	78.109	Cricetulus_griseus_chok1gshd
ENSPMEG00000017343	smfn	72	78.607	ENSCGRG00001019814	-	85	78.607	Cricetulus_griseus_chok1gshd
ENSPMEG00000017343	smfn	71	77.778	ENSCGRG00001010922	-	98	76.617	Cricetulus_griseus_chok1gshd
ENSPMEG00000017343	smfn	72	78.607	ENSCGRG00000006235	Rexo2	85	78.607	Cricetulus_griseus_crigri
ENSPMEG00000017343	smfn	69	83.854	ENSCSEG00000007214	smfn	72	83.500	Cynoglossus_semilaevis
ENSPMEG00000017343	smfn	65	89.617	ENSCVAG00000012008	smfn	99	89.617	Cyprinodon_variegatus
ENSPMEG00000017343	smfn	81	71.552	ENSDARG00000009806	smfn	88	71.552	Danio_rerio
ENSPMEG00000017343	smfn	61	83.721	ENSDNOG00000046533	REXO2	84	82.286	Dasypus_novemcinctus
ENSPMEG00000017343	smfn	69	62.694	ENSDORG00000025142	-	87	61.000	Dipodomys_ordii
ENSPMEG00000017343	smfn	72	79.104	ENSDORG00000011255	Rexo2	85	79.104	Dipodomys_ordii
ENSPMEG00000017343	smfn	67	53.723	FBgn0039115	CG10214	88	53.723	Drosophila_melanogaster
ENSPMEG00000017343	smfn	64	77.095	ENSEBUG00000013964	REXO2	61	77.095	Eptatretus_burgeri
ENSPMEG00000017343	smfn	72	79.602	ENSEASG00005006674	REXO2	85	79.602	Equus_asinus_asinus
ENSPMEG00000017343	smfn	72	79.602	ENSECAG00000005988	REXO2	85	79.602	Equus_caballus
ENSPMEG00000017343	smfn	93	67.050	ENSELUG00000020072	smfn	86	67.050	Esox_lucius
ENSPMEG00000017343	smfn	72	79.602	ENSFCAG00000018632	REXO2	85	79.602	Felis_catus
ENSPMEG00000017343	smfn	67	76.471	ENSFALG00000010044	REXO2	93	76.471	Ficedula_albicollis
ENSPMEG00000017343	smfn	73	77.941	ENSFDAG00000011764	REXO2	86	77.941	Fukomys_damarensis
ENSPMEG00000017343	smfn	68	81.053	ENSGMOG00000006370	smfn	98	81.053	Gadus_morhua
ENSPMEG00000017343	smfn	70	78.462	ENSGALG00000035980	REXO2	86	77.000	Gallus_gallus
ENSPMEG00000017343	smfn	99	95.341	ENSGAFG00000015349	smfn	99	95.341	Gambusia_affinis
ENSPMEG00000017343	smfn	70	85.641	ENSGACG00000020096	smfn	96	85.641	Gasterosteus_aculeatus
ENSPMEG00000017343	smfn	73	75.862	ENSGAGG00000021126	REXO2	88	75.862	Gopherus_agassizii
ENSPMEG00000017343	smfn	72	78.607	ENSGGOG00000023267	REXO2	85	78.607	Gorilla_gorilla
ENSPMEG00000017343	smfn	80	59.735	ENSHBUG00000020097	REXO2	88	59.735	Haplochromis_burtoni
ENSPMEG00000017343	smfn	73	77.451	ENSHGLG00000013556	REXO2	86	77.451	Heterocephalus_glaber_female
ENSPMEG00000017343	smfn	73	77.941	ENSHGLG00100005257	REXO2	86	77.941	Heterocephalus_glaber_male
ENSPMEG00000017343	smfn	64	78.333	ENSHCOG00000007122	smfn	98	78.333	Hippocampus_comes
ENSPMEG00000017343	smfn	70	83.590	ENSIPUG00000020440	rexo2	73	82.828	Ictalurus_punctatus
ENSPMEG00000017343	smfn	72	79.104	ENSSTOG00000012465	REXO2	85	79.104	Ictidomys_tridecemlineatus
ENSPMEG00000017343	smfn	72	56.436	ENSJJAG00000022605	-	81	56.436	Jaculus_jaculus
ENSPMEG00000017343	smfn	72	79.104	ENSJJAG00000013710	-	85	79.104	Jaculus_jaculus
ENSPMEG00000017343	smfn	100	69.965	ENSKMAG00000016795	smfn	100	70.671	Kryptolebias_marmoratus
ENSPMEG00000017343	smfn	66	82.609	ENSLBEG00000006021	smfn	97	82.609	Labrus_bergylta
ENSPMEG00000017343	smfn	72	68.473	ENSLACG00000018623	REXO2	83	68.473	Latimeria_chalumnae
ENSPMEG00000017343	smfn	72	81.095	ENSLOCG00000002389	smfn	96	81.095	Lepisosteus_oculatus
ENSPMEG00000017343	smfn	71	79.798	ENSLAFG00000012451	REXO2	85	78.607	Loxodonta_africana
ENSPMEG00000017343	smfn	72	78.607	ENSMFAG00000041155	REXO2	85	78.607	Macaca_fascicularis
ENSPMEG00000017343	smfn	72	78.607	ENSMMUG00000012269	REXO2	85	78.607	Macaca_mulatta
ENSPMEG00000017343	smfn	72	78.607	ENSMNEG00000033379	REXO2	85	78.607	Macaca_nemestrina
ENSPMEG00000017343	smfn	72	78.607	ENSMLEG00000036571	REXO2	85	78.607	Mandrillus_leucophaeus
ENSPMEG00000017343	smfn	100	69.751	ENSMAMG00000021209	smfn	99	69.751	Mastacembelus_armatus
ENSPMEG00000017343	smfn	80	80.088	ENSMZEG00005020730	REXO2	86	80.088	Maylandia_zebra
ENSPMEG00000017343	smfn	80	80.088	ENSMZEG00005023224	-	86	80.088	Maylandia_zebra
ENSPMEG00000017343	smfn	57	75.155	ENSMGAG00000003026	REXO2	99	75.155	Meleagris_gallopavo
ENSPMEG00000017343	smfn	72	78.607	ENSMAUG00000014576	Rexo2	85	78.607	Mesocricetus_auratus
ENSPMEG00000017343	smfn	72	79.104	ENSMICG00000010094	REXO2	85	79.104	Microcebus_murinus
ENSPMEG00000017343	smfn	72	78.607	ENSMOCG00000009016	Rexo2	85	78.607	Microtus_ochrogaster
ENSPMEG00000017343	smfn	74	82.039	ENSMMOG00000006430	smfn	76	82.039	Mola_mola
ENSPMEG00000017343	smfn	72	78.607	ENSMODG00000013913	REXO2	85	78.607	Monodelphis_domestica
ENSPMEG00000017343	smfn	83	77.253	ENSMALG00000018130	smfn	67	77.253	Monopterus_albus
ENSPMEG00000017343	smfn	71	78.000	MGP_CAROLIEiJ_G0032166	Rexo2	84	78.000	Mus_caroli
ENSPMEG00000017343	smfn	71	78.000	ENSMUSG00000032026	Rexo2	84	78.000	Mus_musculus
ENSPMEG00000017343	smfn	71	78.000	MGP_PahariEiJ_G0015034	Rexo2	84	78.000	Mus_pahari
ENSPMEG00000017343	smfn	71	78.000	MGP_SPRETEiJ_G0033305	Rexo2	84	78.000	Mus_spretus
ENSPMEG00000017343	smfn	72	79.602	ENSMPUG00000003947	REXO2	85	79.602	Mustela_putorius_furo
ENSPMEG00000017343	smfn	72	78.607	ENSMLUG00000009030	REXO2	85	78.607	Myotis_lucifugus
ENSPMEG00000017343	smfn	71	79.798	ENSNGAG00000008819	Rexo2	98	78.607	Nannospalax_galili
ENSPMEG00000017343	smfn	66	83.871	ENSNBRG00000006529	smfn	98	83.871	Neolamprologus_brichardi
ENSPMEG00000017343	smfn	53	52.703	ENSNBRG00000015319	-	92	52.703	Neolamprologus_brichardi
ENSPMEG00000017343	smfn	72	78.607	ENSNLEG00000029745	REXO2	85	78.607	Nomascus_leucogenys
ENSPMEG00000017343	smfn	72	78.109	ENSMEUG00000011558	REXO2	92	78.109	Notamacropus_eugenii
ENSPMEG00000017343	smfn	72	55.224	ENSOPRG00000011076	REXO2	98	51.724	Ochotona_princeps
ENSPMEG00000017343	smfn	64	64.804	ENSODEG00000016046	-	89	64.804	Octodon_degus
ENSPMEG00000017343	smfn	66	79.570	ENSODEG00000009750	-	99	79.570	Octodon_degus
ENSPMEG00000017343	smfn	80	80.531	ENSONIG00000001954	smfn	97	80.531	Oreochromis_niloticus
ENSPMEG00000017343	smfn	71	78.788	ENSOANG00000001754	REXO2	84	77.612	Ornithorhynchus_anatinus
ENSPMEG00000017343	smfn	72	79.104	ENSOCUG00000004274	REXO2	80	79.104	Oryctolagus_cuniculus
ENSPMEG00000017343	smfn	96	67.528	ENSORLG00000005119	smfn	85	67.528	Oryzias_latipes
ENSPMEG00000017343	smfn	96	67.897	ENSORLG00020010121	smfn	71	77.578	Oryzias_latipes_hni
ENSPMEG00000017343	smfn	96	68.266	ENSORLG00015015699	smfn	85	68.266	Oryzias_latipes_hsok
ENSPMEG00000017343	smfn	80	73.991	ENSOMEG00000016878	REXO2	80	73.991	Oryzias_melastigma
ENSPMEG00000017343	smfn	51	75.352	ENSOMEG00000008940	-	99	75.352	Oryzias_melastigma
ENSPMEG00000017343	smfn	72	79.104	ENSOGAG00000016860	REXO2	85	79.104	Otolemur_garnettii
ENSPMEG00000017343	smfn	71	80.808	ENSOARG00000001040	REXO2	94	79.602	Ovis_aries
ENSPMEG00000017343	smfn	72	78.607	ENSPPAG00000039849	REXO2	85	78.607	Pan_paniscus
ENSPMEG00000017343	smfn	72	79.602	ENSPPRG00000007255	REXO2	85	79.602	Panthera_pardus
ENSPMEG00000017343	smfn	66	80.108	ENSPTIG00000015578	REXO2	99	80.108	Panthera_tigris_altaica
ENSPMEG00000017343	smfn	72	78.607	ENSPTRG00000004306	REXO2	85	78.607	Pan_troglodytes
ENSPMEG00000017343	smfn	72	78.607	ENSPANG00000010675	REXO2	85	78.607	Papio_anubis
ENSPMEG00000017343	smfn	95	66.667	ENSPKIG00000000911	smfn	95	66.667	Paramormyrops_kingsleyae
ENSPMEG00000017343	smfn	71	79.293	ENSPSIG00000005151	REXO2	97	62.222	Pelodiscus_sinensis
ENSPMEG00000017343	smfn	66	82.796	ENSPMGG00000007442	smfn	99	82.796	Periophthalmus_magnuspinnatus
ENSPMEG00000017343	smfn	71	64.646	ENSPEMG00000001421	Rexo2	84	63.682	Peromyscus_maniculatus_bairdii
ENSPMEG00000017343	smfn	71	79.798	ENSPCIG00000011227	REXO2	53	79.798	Phascolarctos_cinereus
ENSPMEG00000017343	smfn	100	99.286	ENSPFOG00000017861	smfn	100	99.286	Poecilia_formosa
ENSPMEG00000017343	smfn	92	94.163	ENSPLAG00000007327	REXO2	98	94.163	Poecilia_latipinna
ENSPMEG00000017343	smfn	100	96.786	ENSPREG00000016438	smfn	100	96.786	Poecilia_reticulata
ENSPMEG00000017343	smfn	72	78.607	ENSPPYG00000003895	REXO2	85	78.607	Pongo_abelii
ENSPMEG00000017343	smfn	76	74.648	ENSPCAG00000005237	REXO2	85	78.109	Procavia_capensis
ENSPMEG00000017343	smfn	58	81.988	ENSPCOG00000027639	REXO2	83	81.988	Propithecus_coquereli
ENSPMEG00000017343	smfn	72	67.980	ENSPVAG00000005295	REXO2	85	67.980	Pteropus_vampyrus
ENSPMEG00000017343	smfn	78	80.734	ENSPNYG00000018401	smfn	83	80.734	Pundamilia_nyererei
ENSPMEG00000017343	smfn	69	81.443	ENSPNAG00000005290	smfn	74	80.500	Pygocentrus_nattereri
ENSPMEG00000017343	smfn	71	78.500	ENSRNOG00000018939	Rexo2	84	78.500	Rattus_norvegicus
ENSPMEG00000017343	smfn	72	78.607	ENSRBIG00000037809	REXO2	85	78.607	Rhinopithecus_bieti
ENSPMEG00000017343	smfn	72	78.607	ENSRROG00000038928	REXO2	85	78.607	Rhinopithecus_roxellana
ENSPMEG00000017343	smfn	64	44.624	YLR059C	REX2	69	44.624	Saccharomyces_cerevisiae
ENSPMEG00000017343	smfn	72	79.104	ENSSBOG00000028651	REXO2	85	79.104	Saimiri_boliviensis_boliviensis
ENSPMEG00000017343	smfn	72	78.607	ENSSHAG00000008008	REXO2	86	78.607	Sarcophilus_harrisii
ENSPMEG00000017343	smfn	66	80.541	ENSSFOG00015022414	smfn	98	80.541	Scleropages_formosus
ENSPMEG00000017343	smfn	98	67.626	ENSSMAG00000003168	smfn	98	67.626	Scophthalmus_maximus
ENSPMEG00000017343	smfn	100	67.958	ENSSDUG00000015624	smfn	99	67.958	Seriola_dumerili
ENSPMEG00000017343	smfn	100	68.310	ENSSLDG00000014005	smfn	99	68.310	Seriola_lalandi_dorsalis
ENSPMEG00000017343	smfn	56	74.051	ENSSPUG00000006005	REXO2	85	74.051	Sphenodon_punctatus
ENSPMEG00000017343	smfn	66	87.027	ENSSPAG00000001530	smfn	99	87.027	Stegastes_partitus
ENSPMEG00000017343	smfn	72	79.602	ENSSSCG00000015056	REXO2	85	79.602	Sus_scrofa
ENSPMEG00000017343	smfn	71	76.263	ENSTGUG00000000121	REXO2	88	74.272	Taeniopygia_guttata
ENSPMEG00000017343	smfn	78	80.184	ENSTRUG00000021529	smfn	79	80.184	Takifugu_rubripes
ENSPMEG00000017343	smfn	68	84.737	ENSTNIG00000008588	smfn	88	84.343	Tetraodon_nigroviridis
ENSPMEG00000017343	smfn	72	79.104	ENSTBEG00000017040	REXO2	85	79.104	Tupaia_belangeri
ENSPMEG00000017343	smfn	72	79.104	ENSTTRG00000014928	REXO2	85	79.104	Tursiops_truncatus
ENSPMEG00000017343	smfn	71	74.500	ENSUAMG00000019096	REXO2	83	82.609	Ursus_americanus
ENSPMEG00000017343	smfn	72	79.602	ENSUMAG00000003770	REXO2	85	79.602	Ursus_maritimus
ENSPMEG00000017343	smfn	66	61.828	ENSVPAG00000006301	REXO2	99	61.828	Vicugna_pacos
ENSPMEG00000017343	smfn	71	80.808	ENSVVUG00000025223	REXO2	85	79.602	Vulpes_vulpes
ENSPMEG00000017343	smfn	78	72.477	ENSXETG00000012648	rexo2	97	69.198	Xenopus_tropicalis
ENSPMEG00000017343	smfn	68	93.717	ENSXCOG00000018838	smfn	95	95.699	Xiphophorus_couchianus
ENSPMEG00000017343	smfn	100	91.786	ENSXMAG00000021125	smfn	88	91.786	Xiphophorus_maculatus