EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMEG00000017492 (Gene tree)
Gene ID: 106931237
Gene Symbol: rbm47
Alias: -
Full Name: RNA binding motif protein 47
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Minus strand
Length: 9896 bases
Position: chrKQ552327.1:153608-163503
Accession: 106931237
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000014986	RRM_1	PF00076.22	1.1e-38	1	3
ENSPMEP00000014986	RRM_1	PF00076.22	1.1e-38	2	3
ENSPMEP00000014986	RRM_1	PF00076.22	1.1e-38	3	3
ENSPMEP00000030785	RRM_1	PF00076.22	1.6e-38	1	3
ENSPMEP00000030785	RRM_1	PF00076.22	1.6e-38	2	3
ENSPMEP00000030785	RRM_1	PF00076.22	1.6e-38	3	3
ENSPMEP00000030784	RRM_1	PF00076.22	1.9e-38	1	3
ENSPMEP00000030784	RRM_1	PF00076.22	1.9e-38	2	3
ENSPMEP00000030784	RRM_1	PF00076.22	1.9e-38	3	3
ENSPMEP00000014999	RRM_1	PF00076.22	2e-38	1	3
ENSPMEP00000014999	RRM_1	PF00076.22	2e-38	2	3
ENSPMEP00000014999	RRM_1	PF00076.22	2e-38	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000032823	-	4164	XM_015009234	ENSPMEP00000030784	611 (aa)	XP_014864720	UPI00072E7303
ENSPMET00000023135	-	3957	XM_015009237	ENSPMEP00000014986	542 (aa)	XP_014864723	UPI00072E164C
ENSPMET00000023146	-	4188	XM_015009231	ENSPMEP00000014999	619 (aa)	XP_014864717	UPI00072DD55A
ENSPMET00000023131	-	1776	-	ENSPMEP00000030785	591 (aa)	-	-

Gene Model

Click here to download ENSPMEG00000017492's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000017492's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMEG00000017492	rbm47	56	53.922	ENSPMEG00000009665	hnrnpr	50	53.526
ENSPMEG00000017492	rbm47	55	53.974	ENSPMEG00000014852	syncripl	75	46.890
ENSPMEG00000017492	rbm47	53	68.990	ENSPMEG00000015724	rbm46	62	70.035

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000017492	rbm47	100	80.319	ENSG00000163694	RBM47	100	85.253	Homo_sapiens
ENSPMEG00000017492	rbm47	100	93.059	ENSAPOG00000011062	rbm47	100	93.059	Acanthochromis_polyacanthus
ENSPMEG00000017492	rbm47	93	83.898	ENSAMEG00000009672	RBM47	100	78.203	Ailuropoda_melanoleuca
ENSPMEG00000017492	rbm47	100	89.713	ENSACIG00000011531	rbm47	100	89.713	Amphilophus_citrinellus
ENSPMEG00000017492	rbm47	100	93.316	ENSAOCG00000022245	rbm47	100	93.316	Amphiprion_ocellaris
ENSPMEG00000017492	rbm47	100	93.316	ENSAPEG00000018304	rbm47	100	93.316	Amphiprion_percula
ENSPMEG00000017492	rbm47	100	91.517	ENSATEG00000018400	rbm47	100	89.839	Anabas_testudineus
ENSPMEG00000017492	rbm47	100	77.833	ENSAPLG00000013974	RBM47	100	77.500	Anas_platyrhynchos
ENSPMEG00000017492	rbm47	100	79.028	ENSACAG00000011833	RBM47	100	77.575	Anolis_carolinensis
ENSPMEG00000017492	rbm47	100	82.447	ENSANAG00000029440	RBM47	96	87.042	Aotus_nancymaae
ENSPMEG00000017492	rbm47	100	90.488	ENSACLG00000016902	rbm47	100	90.488	Astatotilapia_calliptera
ENSPMEG00000017492	rbm47	93	89.859	ENSAMXG00000021794	rbm47	100	80.293	Astyanax_mexicanus
ENSPMEG00000017492	rbm47	100	80.102	ENSBTAG00000002356	RBM47	100	78.798	Bos_taurus
ENSPMEG00000017492	rbm47	97	85.634	ENSCJAG00000019385	RBM47	96	87.042	Callithrix_jacchus
ENSPMEG00000017492	rbm47	93	84.703	ENSCAFG00000015898	RBM47	100	77.667	Canis_familiaris
ENSPMEG00000017492	rbm47	83	80.527	ENSCAFG00020010558	RBM47	94	81.963	Canis_lupus_dingo
ENSPMEG00000017492	rbm47	100	79.847	ENSCHIG00000026214	RBM47	100	78.631	Capra_hircus
ENSPMEG00000017492	rbm47	84	86.099	ENSTSYG00000033612	RBM47	93	84.956	Carlito_syrichta
ENSPMEG00000017492	rbm47	100	72.362	ENSCAPG00000008426	RBM47	100	74.332	Cavia_aperea
ENSPMEG00000017492	rbm47	100	81.333	ENSCPOG00000014100	RBM47	100	82.933	Cavia_porcellus
ENSPMEG00000017492	rbm47	100	83.511	ENSCCAG00000030129	-	96	86.761	Cebus_capucinus
ENSPMEG00000017492	rbm47	99	54.576	ENSCCAG00000024397	-	99	54.908	Cebus_capucinus
ENSPMEG00000017492	rbm47	100	80.319	ENSCATG00000042064	RBM47	96	87.042	Cercocebus_atys
ENSPMEG00000017492	rbm47	100	81.067	ENSCLAG00000001684	RBM47	100	82.667	Chinchilla_lanigera
ENSPMEG00000017492	rbm47	93	84.136	ENSCSAG00000017060	RBM47	100	78.833	Chlorocebus_sabaeus
ENSPMEG00000017492	rbm47	85	77.488	ENSCHOG00000011731	RBM47	88	77.528	Choloepus_hoffmanni
ENSPMEG00000017492	rbm47	100	82.908	ENSCPBG00000013831	RBM47	100	80.731	Chrysemys_picta_bellii
ENSPMEG00000017492	rbm47	100	81.481	ENSCANG00000019997	RBM47	96	86.761	Colobus_angolensis_palliatus
ENSPMEG00000017492	rbm47	100	74.425	ENSCGRG00001020102	-	100	78.249	Cricetulus_griseus_chok1gshd
ENSPMEG00000017492	rbm47	100	81.649	ENSCGRG00001000623	-	100	82.979	Cricetulus_griseus_chok1gshd
ENSPMEG00000017492	rbm47	100	78.173	ENSCGRG00000007762	-	100	82.278	Cricetulus_griseus_crigri
ENSPMEG00000017492	rbm47	95	78.512	ENSCGRG00000014760	-	98	80.165	Cricetulus_griseus_crigri
ENSPMEG00000017492	rbm47	100	87.395	ENSCSEG00000004545	rbm47	100	87.395	Cynoglossus_semilaevis
ENSPMEG00000017492	rbm47	100	96.401	ENSCVAG00000020144	rbm47	100	96.401	Cyprinodon_variegatus
ENSPMEG00000017492	rbm47	100	86.189	ENSDARG00000061985	rbm47	100	82.927	Danio_rerio
ENSPMEG00000017492	rbm47	93	85.915	ENSDNOG00000046854	RBM47	100	77.963	Dasypus_novemcinctus
ENSPMEG00000017492	rbm47	100	78.987	ENSDORG00000010144	Rbm47	100	78.146	Dipodomys_ordii
ENSPMEG00000017492	rbm47	93	82.913	ENSETEG00000009194	RBM47	100	78.571	Echinops_telfairi
ENSPMEG00000017492	rbm47	100	58.361	ENSEBUG00000011912	rbm47	100	58.197	Eptatretus_burgeri
ENSPMEG00000017492	rbm47	93	84.789	ENSEASG00005008443	RBM47	100	78.297	Equus_asinus_asinus
ENSPMEG00000017492	rbm47	93	84.789	ENSECAG00000004400	RBM47	100	78.297	Equus_caballus
ENSPMEG00000017492	rbm47	73	88.038	ENSEEUG00000001194	RBM47	72	90.431	Erinaceus_europaeus
ENSPMEG00000017492	rbm47	100	87.909	ENSELUG00000006148	rbm47	100	87.154	Esox_lucius
ENSPMEG00000017492	rbm47	93	83.898	ENSFCAG00000012399	RBM47	100	78.763	Felis_catus
ENSPMEG00000017492	rbm47	100	81.888	ENSFALG00000002861	RBM47	100	79.967	Ficedula_albicollis
ENSPMEG00000017492	rbm47	100	80.533	ENSFDAG00000016326	RBM47	100	80.533	Fukomys_damarensis
ENSPMEG00000017492	rbm47	100	95.887	ENSFHEG00000007938	rbm47	100	93.739	Fundulus_heteroclitus
ENSPMEG00000017492	rbm47	100	87.310	ENSGMOG00000014802	rbm47	100	82.362	Gadus_morhua
ENSPMEG00000017492	rbm47	72	82.653	ENSGALG00000014267	RBM47	99	84.840	Gallus_gallus
ENSPMEG00000017492	rbm47	72	93.830	ENSGAFG00000020571	rbm47	98	99.187	Gambusia_affinis
ENSPMEG00000017492	rbm47	100	89.203	ENSGACG00000016223	rbm47	100	89.203	Gasterosteus_aculeatus
ENSPMEG00000017492	rbm47	100	82.908	ENSGAGG00000020051	RBM47	100	80.565	Gopherus_agassizii
ENSPMEG00000017492	rbm47	100	80.319	ENSGGOG00000001367	RBM47	96	87.042	Gorilla_gorilla
ENSPMEG00000017492	rbm47	100	90.488	ENSHBUG00000003520	rbm47	100	90.488	Haplochromis_burtoni
ENSPMEG00000017492	rbm47	100	59.926	ENSHGLG00000016914	RBM47	100	79.747	Heterocephalus_glaber_female
ENSPMEG00000017492	rbm47	100	75.448	ENSHGLG00100003071	-	100	74.680	Heterocephalus_glaber_male
ENSPMEG00000017492	rbm47	100	81.333	ENSHGLG00100014028	-	100	81.333	Heterocephalus_glaber_male
ENSPMEG00000017492	rbm47	99	90.746	ENSHCOG00000002074	rbm47	99	90.746	Hippocampus_comes
ENSPMEG00000017492	rbm47	100	86.410	ENSIPUG00000004743	rbm47	100	83.838	Ictalurus_punctatus
ENSPMEG00000017492	rbm47	100	80.371	ENSSTOG00000004727	RBM47	100	81.586	Ictidomys_tridecemlineatus
ENSPMEG00000017492	rbm47	93	86.158	ENSJJAG00000013823	Rbm47	100	77.704	Jaculus_jaculus
ENSPMEG00000017492	rbm47	100	93.077	ENSKMAG00000000084	rbm47	100	93.077	Kryptolebias_marmoratus
ENSPMEG00000017492	rbm47	100	91.517	ENSLBEG00000008436	rbm47	99	91.538	Labrus_bergylta
ENSPMEG00000017492	rbm47	93	88.483	ENSLACG00000007196	RBM47	100	79.500	Latimeria_chalumnae
ENSPMEG00000017492	rbm47	93	90.057	ENSLOCG00000012966	rbm47	95	82.805	Lepisosteus_oculatus
ENSPMEG00000017492	rbm47	100	79.284	ENSLAFG00000011998	RBM47	100	79.062	Loxodonta_africana
ENSPMEG00000017492	rbm47	100	80.319	ENSMFAG00000037967	RBM47	96	87.042	Macaca_fascicularis
ENSPMEG00000017492	rbm47	93	84.136	ENSMMUG00000012036	RBM47	100	83.420	Macaca_mulatta
ENSPMEG00000017492	rbm47	100	80.319	ENSMNEG00000040774	RBM47	96	87.042	Macaca_nemestrina
ENSPMEG00000017492	rbm47	100	83.175	ENSMLEG00000041432	RBM47	97	89.456	Mandrillus_leucophaeus
ENSPMEG00000017492	rbm47	100	92.288	ENSMAMG00000019143	rbm47	100	92.443	Mastacembelus_armatus
ENSPMEG00000017492	rbm47	100	90.488	ENSMZEG00005023659	rbm47	99	90.537	Maylandia_zebra
ENSPMEG00000017492	rbm47	100	82.398	ENSMGAG00000012226	RBM47	100	80.399	Meleagris_gallopavo
ENSPMEG00000017492	rbm47	100	81.167	ENSMAUG00000006493	Rbm47	100	82.493	Mesocricetus_auratus
ENSPMEG00000017492	rbm47	97	82.051	ENSMICG00000026417	RBM47	100	82.620	Microcebus_murinus
ENSPMEG00000017492	rbm47	100	81.117	ENSMOCG00000021170	Rbm47	100	82.447	Microtus_ochrogaster
ENSPMEG00000017492	rbm47	100	91.003	ENSMMOG00000007260	rbm47	100	88.562	Mola_mola
ENSPMEG00000017492	rbm47	100	78.005	ENSMODG00000020561	-	98	74.232	Monodelphis_domestica
ENSPMEG00000017492	rbm47	100	82.097	ENSMODG00000007003	RBM47	100	79.097	Monodelphis_domestica
ENSPMEG00000017492	rbm47	56	78.710	ENSMODG00000015426	-	97	78.710	Monodelphis_domestica
ENSPMEG00000017492	rbm47	100	90.746	ENSMALG00000005167	rbm47	100	90.537	Monopterus_albus
ENSPMEG00000017492	rbm47	100	81.117	MGP_CAROLIEiJ_G0027258	Rbm47	98	84.615	Mus_caroli
ENSPMEG00000017492	rbm47	100	81.383	ENSMUSG00000070780	Rbm47	98	84.890	Mus_musculus
ENSPMEG00000017492	rbm47	100	81.117	MGP_PahariEiJ_G0017040	Rbm47	98	84.615	Mus_pahari
ENSPMEG00000017492	rbm47	100	81.383	MGP_SPRETEiJ_G0028253	Rbm47	98	84.890	Mus_spretus
ENSPMEG00000017492	rbm47	93	85.028	ENSMPUG00000006177	RBM47	94	78.595	Mustela_putorius_furo
ENSPMEG00000017492	rbm47	100	80.916	ENSMLUG00000000889	RBM47	100	78.333	Myotis_lucifugus
ENSPMEG00000017492	rbm47	100	81.378	ENSNGAG00000003325	Rbm47	100	77.833	Nannospalax_galili
ENSPMEG00000017492	rbm47	100	90.746	ENSNBRG00000015092	rbm47	100	89.070	Neolamprologus_brichardi
ENSPMEG00000017492	rbm47	100	80.319	ENSNLEG00000017151	RBM47	100	83.777	Nomascus_leucogenys
ENSPMEG00000017492	rbm47	65	86.723	ENSMEUG00000009516	-	100	79.302	Notamacropus_eugenii
ENSPMEG00000017492	rbm47	86	84.232	ENSOPRG00000016507	-	75	84.232	Ochotona_princeps
ENSPMEG00000017492	rbm47	93	83.051	ENSODEG00000004873	RBM47	100	76.923	Octodon_degus
ENSPMEG00000017492	rbm47	100	91.517	ENSONIG00000009061	rbm47	100	88.889	Oreochromis_niloticus
ENSPMEG00000017492	rbm47	100	80.653	ENSOANG00000008978	RBM47	100	77.944	Ornithorhynchus_anatinus
ENSPMEG00000017492	rbm47	100	79.284	ENSOCUG00000012034	RBM47	100	78.130	Oryctolagus_cuniculus
ENSPMEG00000017492	rbm47	100	90.513	ENSORLG00000005847	rbm47	100	90.513	Oryzias_latipes
ENSPMEG00000017492	rbm47	100	90.513	ENSORLG00020005154	rbm47	100	90.513	Oryzias_latipes_hni
ENSPMEG00000017492	rbm47	100	90.513	ENSORLG00015000066	rbm47	100	90.513	Oryzias_latipes_hsok
ENSPMEG00000017492	rbm47	100	90.231	ENSOMEG00000010730	rbm47	100	88.889	Oryzias_melastigma
ENSPMEG00000017492	rbm47	93	85.311	ENSOGAG00000029367	-	100	78.595	Otolemur_garnettii
ENSPMEG00000017492	rbm47	93	77.966	ENSOGAG00000025193	-	100	71.572	Otolemur_garnettii
ENSPMEG00000017492	rbm47	100	69.115	ENSOARG00000012711	RBM47	100	71.096	Ovis_aries
ENSPMEG00000017492	rbm47	93	84.136	ENSPPAG00000029763	RBM47	100	78.833	Pan_paniscus
ENSPMEG00000017492	rbm47	100	81.867	ENSPPRG00000012873	RBM47	99	83.467	Panthera_pardus
ENSPMEG00000017492	rbm47	86	75.639	ENSPTIG00000017046	RBM47	100	76.228	Panthera_tigris_altaica
ENSPMEG00000017492	rbm47	100	80.319	ENSPTRG00000016006	RBM47	96	87.042	Pan_troglodytes
ENSPMEG00000017492	rbm47	100	80.319	ENSPANG00000005980	RBM47	96	87.042	Papio_anubis
ENSPMEG00000017492	rbm47	100	78.388	ENSPKIG00000013431	RBM47	98	84.062	Paramormyrops_kingsleyae
ENSPMEG00000017492	rbm47	98	81.552	ENSPKIG00000005037	rbm47	100	79.242	Paramormyrops_kingsleyae
ENSPMEG00000017492	rbm47	88	82.908	ENSPSIG00000017516	RBM47	97	81.767	Pelodiscus_sinensis
ENSPMEG00000017492	rbm47	100	88.533	ENSPMGG00000018540	rbm47	100	88.533	Periophthalmus_magnuspinnatus
ENSPMEG00000017492	rbm47	100	81.117	ENSPEMG00000011088	Rbm47	100	82.447	Peromyscus_maniculatus_bairdii
ENSPMEG00000017492	rbm47	100	99.345	ENSPFOG00000007997	rbm47	100	99.345	Poecilia_formosa
ENSPMEG00000017492	rbm47	100	99.018	ENSPLAG00000002072	rbm47	100	99.728	Poecilia_latipinna
ENSPMEG00000017492	rbm47	100	99.486	ENSPREG00000008456	rbm47	100	99.728	Poecilia_reticulata
ENSPMEG00000017492	rbm47	93	74.157	ENSPPYG00000014688	RBM47	98	70.205	Pongo_abelii
ENSPMEG00000017492	rbm47	88	77.638	ENSPCAG00000011879	RBM47	81	83.709	Procavia_capensis
ENSPMEG00000017492	rbm47	100	80.319	ENSPCOG00000023451	RBM47	100	82.447	Propithecus_coquereli
ENSPMEG00000017492	rbm47	93	83.708	ENSPVAG00000003812	RBM47	100	78.167	Pteropus_vampyrus
ENSPMEG00000017492	rbm47	100	90.488	ENSPNYG00000022868	rbm47	100	88.618	Pundamilia_nyererei
ENSPMEG00000017492	rbm47	100	85.678	ENSPNAG00000007940	rbm47	100	81.922	Pygocentrus_nattereri
ENSPMEG00000017492	rbm47	100	78.481	ENSRNOG00000002408	Rbm47	100	77.963	Rattus_norvegicus
ENSPMEG00000017492	rbm47	100	81.481	ENSRBIG00000039601	RBM47	96	86.761	Rhinopithecus_bieti
ENSPMEG00000017492	rbm47	100	81.481	ENSRROG00000044696	RBM47	96	86.761	Rhinopithecus_roxellana
ENSPMEG00000017492	rbm47	100	73.790	ENSSBOG00000028475	RBM47	100	80.658	Saimiri_boliviensis_boliviensis
ENSPMEG00000017492	rbm47	100	81.841	ENSSHAG00000017576	RBM47	96	87.006	Sarcophilus_harrisii
ENSPMEG00000017492	rbm47	100	77.036	ENSSFOG00015012445	rbm47	100	83.418	Scleropages_formosus
ENSPMEG00000017492	rbm47	99	77.929	ENSSFOG00015024101	RBM47	98	77.929	Scleropages_formosus
ENSPMEG00000017492	rbm47	100	90.488	ENSSMAG00000009744	rbm47	100	90.488	Scophthalmus_maximus
ENSPMEG00000017492	rbm47	100	91.094	ENSSDUG00000022684	rbm47	100	89.933	Seriola_dumerili
ENSPMEG00000017492	rbm47	100	91.349	ENSSLDG00000003109	rbm47	100	91.349	Seriola_lalandi_dorsalis
ENSPMEG00000017492	rbm47	84	79.204	ENSSARG00000001735	RBM47	84	81.858	Sorex_araneus
ENSPMEG00000017492	rbm47	100	83.598	ENSSPUG00000007515	RBM47	100	84.043	Sphenodon_punctatus
ENSPMEG00000017492	rbm47	100	93.059	ENSSPAG00000001257	rbm47	100	93.059	Stegastes_partitus
ENSPMEG00000017492	rbm47	100	81.746	ENSSSCG00000008796	RBM47	100	78.631	Sus_scrofa
ENSPMEG00000017492	rbm47	100	82.143	ENSTGUG00000008705	RBM47	100	79.466	Taeniopygia_guttata
ENSPMEG00000017492	rbm47	100	89.002	ENSTRUG00000014050	rbm47	100	89.002	Takifugu_rubripes
ENSPMEG00000017492	rbm47	100	87.745	ENSTNIG00000006127	rbm47	100	87.582	Tetraodon_nigroviridis
ENSPMEG00000017492	rbm47	80	83.003	ENSTBEG00000001607	RBM47	76	81.067	Tupaia_belangeri
ENSPMEG00000017492	rbm47	93	85.352	ENSTTRG00000002839	RBM47	100	78.297	Tursiops_truncatus
ENSPMEG00000017492	rbm47	93	83.898	ENSUAMG00000021346	RBM47	100	78.595	Ursus_americanus
ENSPMEG00000017492	rbm47	52	84.000	ENSVPAG00000000641	-	53	88.710	Vicugna_pacos
ENSPMEG00000017492	rbm47	93	85.269	ENSVVUG00000014774	RBM47	100	77.667	Vulpes_vulpes
ENSPMEG00000017492	rbm47	100	81.726	ENSXETG00000012802	rbm47	100	78.203	Xenopus_tropicalis
ENSPMEG00000017492	rbm47	100	93.316	ENSXCOG00000000780	rbm47	100	98.913	Xiphophorus_couchianus
ENSPMEG00000017492	rbm47	100	98.972	ENSXMAG00000009874	rbm47	100	98.992	Xiphophorus_maculatus