EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMEG00000017534 (Gene tree)
Gene ID: 106918063
Gene Symbol: rpusd4
Alias: -
Full Name: RNA pseudouridylate synthase domain-containing protein 4-like
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Minus strand
Length: 4028 bases
Position: chrKQ551266.1:363180-367207
Accession: 106918063
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000015063	PseudoU_synth_2	PF00849.22	8.5e-25	1	1
ENSPMEP00000030826	PseudoU_synth_2	PF00849.22	8.6e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000023230	-	1701	-	ENSPMEP00000015063	387 (aa)	-	-
ENSPMET00000032842	-	1713	XM_014987514	ENSPMEP00000030826	391 (aa)	XP_014843000	UPI00072E93E1

Gene Model

Click here to download ENSPMEG00000017534's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000017534's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000017534	rpusd4	84	50.149	ENSG00000165526	RPUSD4	90	48.718	Homo_sapiens
ENSPMEG00000017534	rpusd4	100	68.182	ENSAPOG00000011024	rpusd4	98	68.182	Acanthochromis_polyacanthus
ENSPMEG00000017534	rpusd4	88	48.851	ENSAMEG00000000127	-	90	48.851	Ailuropoda_melanoleuca
ENSPMEG00000017534	rpusd4	57	53.922	ENSAMEG00000005953	-	96	53.922	Ailuropoda_melanoleuca
ENSPMEG00000017534	rpusd4	84	72.644	ENSACIG00000003533	rpusd4	95	72.644	Amphilophus_citrinellus
ENSPMEG00000017534	rpusd4	99	68.354	ENSAOCG00000015409	rpusd4	97	68.354	Amphiprion_ocellaris
ENSPMEG00000017534	rpusd4	99	68.354	ENSAPEG00000018935	rpusd4	97	68.354	Amphiprion_percula
ENSPMEG00000017534	rpusd4	100	66.919	ENSATEG00000008059	rpusd4	97	66.919	Anabas_testudineus
ENSPMEG00000017534	rpusd4	71	50.709	ENSAPLG00000013250	RPUSD4	98	50.694	Anas_platyrhynchos
ENSPMEG00000017534	rpusd4	88	47.564	ENSACAG00000000189	RPUSD4	93	47.564	Anolis_carolinensis
ENSPMEG00000017534	rpusd4	87	47.977	ENSANAG00000024050	RPUSD4	90	47.977	Aotus_nancymaae
ENSPMEG00000017534	rpusd4	99	68.622	ENSACLG00000020996	rpusd4	99	68.622	Astatotilapia_calliptera
ENSPMEG00000017534	rpusd4	86	57.522	ENSAMXG00000031479	rpusd4	95	57.522	Astyanax_mexicanus
ENSPMEG00000017534	rpusd4	81	50.000	ENSBTAG00000020900	RPUSD4	83	50.000	Bos_taurus
ENSPMEG00000017534	rpusd4	88	47.429	ENSCJAG00000042850	RPUSD4	86	47.429	Callithrix_jacchus
ENSPMEG00000017534	rpusd4	78	51.780	ENSCAFG00000010488	RPUSD4	90	49.425	Canis_familiaris
ENSPMEG00000017534	rpusd4	78	51.780	ENSCAFG00020010621	RPUSD4	90	49.425	Canis_lupus_dingo
ENSPMEG00000017534	rpusd4	81	49.371	ENSCHIG00000009975	RPUSD4	83	49.371	Capra_hircus
ENSPMEG00000017534	rpusd4	88	49.138	ENSTSYG00000008456	RPUSD4	90	49.138	Carlito_syrichta
ENSPMEG00000017534	rpusd4	62	47.347	ENSCAPG00000006040	RPUSD4	93	47.347	Cavia_aperea
ENSPMEG00000017534	rpusd4	92	48.219	ENSCPOG00000014971	RPUSD4	93	48.219	Cavia_porcellus
ENSPMEG00000017534	rpusd4	88	47.143	ENSCCAG00000027838	RPUSD4	92	47.143	Cebus_capucinus
ENSPMEG00000017534	rpusd4	88	47.714	ENSCATG00000041570	RPUSD4	90	47.714	Cercocebus_atys
ENSPMEG00000017534	rpusd4	87	50.729	ENSCLAG00000016553	RPUSD4	88	50.729	Chinchilla_lanigera
ENSPMEG00000017534	rpusd4	88	46.686	ENSCSAG00000002274	RPUSD4	90	46.686	Chlorocebus_sabaeus
ENSPMEG00000017534	rpusd4	69	49.632	ENSCHOG00000010249	RPUSD4	94	49.632	Choloepus_hoffmanni
ENSPMEG00000017534	rpusd4	73	52.941	ENSCPBG00000011175	RPUSD4	99	52.941	Chrysemys_picta_bellii
ENSPMEG00000017534	rpusd4	69	38.710	ENSCSAVG00000000872	-	54	38.710	Ciona_savignyi
ENSPMEG00000017534	rpusd4	88	48.442	ENSCANG00000039684	RPUSD4	90	48.442	Colobus_angolensis_palliatus
ENSPMEG00000017534	rpusd4	87	49.419	ENSCGRG00001024141	Rpusd4	89	49.419	Cricetulus_griseus_chok1gshd
ENSPMEG00000017534	rpusd4	87	49.419	ENSCGRG00000014415	Rpusd4	89	49.419	Cricetulus_griseus_crigri
ENSPMEG00000017534	rpusd4	100	77.608	ENSCVAG00000008761	rpusd4	99	77.608	Cyprinodon_variegatus
ENSPMEG00000017534	rpusd4	100	77.608	ENSCVAG00000000392	rpusd4	100	77.608	Cyprinodon_variegatus
ENSPMEG00000017534	rpusd4	83	57.927	ENSDARG00000012674	rpusd4	90	57.927	Danio_rerio
ENSPMEG00000017534	rpusd4	85	48.955	ENSDNOG00000020026	RPUSD4	86	48.955	Dasypus_novemcinctus
ENSPMEG00000017534	rpusd4	94	46.216	ENSDORG00000016717	Rpusd4	92	47.123	Dipodomys_ordii
ENSPMEG00000017534	rpusd4	87	49.565	ENSETEG00000013953	RPUSD4	89	49.854	Echinops_telfairi
ENSPMEG00000017534	rpusd4	88	47.714	ENSEASG00005022982	RPUSD4	90	47.714	Equus_asinus_asinus
ENSPMEG00000017534	rpusd4	88	48.000	ENSECAG00000000557	RPUSD4	90	48.000	Equus_caballus
ENSPMEG00000017534	rpusd4	66	55.249	ENSEEUG00000014036	RPUSD4	68	55.249	Erinaceus_europaeus
ENSPMEG00000017534	rpusd4	94	58.289	ENSELUG00000008075	rpusd4	97	58.289	Esox_lucius
ENSPMEG00000017534	rpusd4	88	47.429	ENSFCAG00000029789	RPUSD4	90	48.000	Felis_catus
ENSPMEG00000017534	rpusd4	84	46.970	ENSFALG00000005171	RPUSD4	96	46.970	Ficedula_albicollis
ENSPMEG00000017534	rpusd4	93	47.541	ENSFDAG00000014307	RPUSD4	95	47.541	Fukomys_damarensis
ENSPMEG00000017534	rpusd4	100	80.051	ENSFHEG00000004329	rpusd4	100	80.051	Fundulus_heteroclitus
ENSPMEG00000017534	rpusd4	84	63.444	ENSGMOG00000017726	rpusd4	97	63.554	Gadus_morhua
ENSPMEG00000017534	rpusd4	72	53.684	ENSGALG00000024326	RPUSD4	94	49.112	Gallus_gallus
ENSPMEG00000017534	rpusd4	100	92.583	ENSGAFG00000021559	rpusd4	100	92.583	Gambusia_affinis
ENSPMEG00000017534	rpusd4	86	71.217	ENSGACG00000001657	rpusd4	97	76.173	Gasterosteus_aculeatus
ENSPMEG00000017534	rpusd4	93	48.098	ENSGAGG00000000132	RPUSD4	98	48.098	Gopherus_agassizii
ENSPMEG00000017534	rpusd4	84	50.448	ENSGGOG00000016494	RPUSD4	90	49.288	Gorilla_gorilla
ENSPMEG00000017534	rpusd4	99	69.036	ENSHBUG00000022838	rpusd4	99	69.036	Haplochromis_burtoni
ENSPMEG00000017534	rpusd4	93	47.945	ENSHGLG00000002285	RPUSD4	94	47.945	Heterocephalus_glaber_female
ENSPMEG00000017534	rpusd4	93	47.945	ENSHGLG00100006385	RPUSD4	94	47.945	Heterocephalus_glaber_male
ENSPMEG00000017534	rpusd4	99	64.541	ENSHCOG00000006612	rpusd4	99	64.541	Hippocampus_comes
ENSPMEG00000017534	rpusd4	91	54.596	ENSIPUG00000023879	rusd4	91	54.596	Ictalurus_punctatus
ENSPMEG00000017534	rpusd4	81	50.938	ENSSTOG00000025280	RPUSD4	87	50.938	Ictidomys_tridecemlineatus
ENSPMEG00000017534	rpusd4	88	48.159	ENSJJAG00000018673	Rpusd4	94	48.159	Jaculus_jaculus
ENSPMEG00000017534	rpusd4	99	67.172	ENSKMAG00000021805	rpusd4	100	67.172	Kryptolebias_marmoratus
ENSPMEG00000017534	rpusd4	94	68.217	ENSLBEG00000020394	rpusd4	93	74.850	Labrus_bergylta
ENSPMEG00000017534	rpusd4	84	50.453	ENSLACG00000011028	RPUSD4	87	48.611	Latimeria_chalumnae
ENSPMEG00000017534	rpusd4	94	42.246	ENSLOCG00000003124	rpusd4	99	42.105	Lepisosteus_oculatus
ENSPMEG00000017534	rpusd4	87	49.856	ENSLAFG00000005211	RPUSD4	100	43.390	Loxodonta_africana
ENSPMEG00000017534	rpusd4	88	48.000	ENSMFAG00000039513	RPUSD4	90	48.000	Macaca_fascicularis
ENSPMEG00000017534	rpusd4	88	47.714	ENSMMUG00000007933	RPUSD4	90	47.714	Macaca_mulatta
ENSPMEG00000017534	rpusd4	88	48.286	ENSMNEG00000027414	RPUSD4	90	48.286	Macaca_nemestrina
ENSPMEG00000017534	rpusd4	88	48.433	ENSMLEG00000042461	RPUSD4	90	48.433	Mandrillus_leucophaeus
ENSPMEG00000017534	rpusd4	94	71.858	ENSMAMG00000023839	rpusd4	94	71.858	Mastacembelus_armatus
ENSPMEG00000017534	rpusd4	99	68.622	ENSMZEG00005011999	rpusd4	99	68.622	Maylandia_zebra
ENSPMEG00000017534	rpusd4	72	51.930	ENSMGAG00000000840	RPUSD4	99	48.024	Meleagris_gallopavo
ENSPMEG00000017534	rpusd4	87	49.563	ENSMAUG00000010280	Rpusd4	89	49.563	Mesocricetus_auratus
ENSPMEG00000017534	rpusd4	82	49.693	ENSMICG00000015979	RPUSD4	90	52.303	Microcebus_murinus
ENSPMEG00000017534	rpusd4	86	47.941	ENSMOCG00000000661	Rpusd4	88	47.941	Microtus_ochrogaster
ENSPMEG00000017534	rpusd4	80	72.524	ENSMMOG00000021731	rpusd4	94	72.524	Mola_mola
ENSPMEG00000017534	rpusd4	83	51.385	ENSMODG00000004521	RPUSD4	81	51.385	Monodelphis_domestica
ENSPMEG00000017534	rpusd4	79	72.638	ENSMALG00000005839	rpusd4	98	70.186	Monopterus_albus
ENSPMEG00000017534	rpusd4	86	48.824	MGP_CAROLIEiJ_G0031954	Rpusd4	88	48.824	Mus_caroli
ENSPMEG00000017534	rpusd4	93	47.709	ENSMUSG00000032044	Rpusd4	95	47.709	Mus_musculus
ENSPMEG00000017534	rpusd4	86	48.824	MGP_PahariEiJ_G0014819	Rpusd4	88	48.824	Mus_pahari
ENSPMEG00000017534	rpusd4	86	49.112	MGP_SPRETEiJ_G0033078	Rpusd4	87	49.112	Mus_spretus
ENSPMEG00000017534	rpusd4	88	49.425	ENSMPUG00000006608	RPUSD4	90	49.425	Mustela_putorius_furo
ENSPMEG00000017534	rpusd4	65	49.219	ENSMLUG00000029348	-	99	49.219	Myotis_lucifugus
ENSPMEG00000017534	rpusd4	83	49.235	ENSMLUG00000017328	-	85	49.235	Myotis_lucifugus
ENSPMEG00000017534	rpusd4	87	50.725	ENSNGAG00000020847	Rpusd4	89	50.725	Nannospalax_galili
ENSPMEG00000017534	rpusd4	84	73.333	ENSNBRG00000005207	rpusd4	95	73.333	Neolamprologus_brichardi
ENSPMEG00000017534	rpusd4	88	48.286	ENSNLEG00000007465	RPUSD4	90	48.286	Nomascus_leucogenys
ENSPMEG00000017534	rpusd4	85	51.190	ENSMEUG00000004370	RPUSD4	88	51.190	Notamacropus_eugenii
ENSPMEG00000017534	rpusd4	87	48.688	ENSODEG00000004577	RPUSD4	88	48.688	Octodon_degus
ENSPMEG00000017534	rpusd4	99	69.309	ENSONIG00000018879	rpusd4	99	69.309	Oreochromis_niloticus
ENSPMEG00000017534	rpusd4	74	48.993	ENSOANG00000007247	RPUSD4	95	48.837	Ornithorhynchus_anatinus
ENSPMEG00000017534	rpusd4	98	47.301	ENSOCUG00000017039	RPUSD4	98	47.179	Oryctolagus_cuniculus
ENSPMEG00000017534	rpusd4	91	65.922	ENSORLG00000002750	rpusd4	93	67.435	Oryzias_latipes
ENSPMEG00000017534	rpusd4	94	65.668	ENSORLG00020002044	rpusd4	90	65.668	Oryzias_latipes_hni
ENSPMEG00000017534	rpusd4	93	65.027	ENSORLG00015020034	rpusd4	90	65.027	Oryzias_latipes_hsok
ENSPMEG00000017534	rpusd4	93	68.956	ENSOMEG00000004861	rpusd4	88	68.956	Oryzias_melastigma
ENSPMEG00000017534	rpusd4	84	50.453	ENSOGAG00000008922	RPUSD4	89	49.568	Otolemur_garnettii
ENSPMEG00000017534	rpusd4	81	49.371	ENSOARG00000012238	RPUSD4	83	49.371	Ovis_aries
ENSPMEG00000017534	rpusd4	84	50.149	ENSPPAG00000042883	RPUSD4	84	49.003	Pan_paniscus
ENSPMEG00000017534	rpusd4	88	48.000	ENSPPRG00000003081	RPUSD4	90	48.000	Panthera_pardus
ENSPMEG00000017534	rpusd4	88	48.000	ENSPTIG00000012059	RPUSD4	88	50.161	Panthera_tigris_altaica
ENSPMEG00000017534	rpusd4	84	50.149	ENSPTRG00000004454	RPUSD4	90	49.003	Pan_troglodytes
ENSPMEG00000017534	rpusd4	88	48.000	ENSPANG00000015040	RPUSD4	90	48.000	Papio_anubis
ENSPMEG00000017534	rpusd4	94	52.846	ENSPKIG00000023986	rpusd4	93	52.846	Paramormyrops_kingsleyae
ENSPMEG00000017534	rpusd4	75	52.525	ENSPSIG00000014268	RPUSD4	93	52.525	Pelodiscus_sinensis
ENSPMEG00000017534	rpusd4	87	66.082	ENSPMGG00000002806	rpusd4	94	65.882	Periophthalmus_magnuspinnatus
ENSPMEG00000017534	rpusd4	86	43.824	ENSPEMG00000000278	Rpusd4	87	43.824	Peromyscus_maniculatus_bairdii
ENSPMEG00000017534	rpusd4	79	40.828	ENSPMAG00000008183	rpusd4	97	40.828	Petromyzon_marinus
ENSPMEG00000017534	rpusd4	86	51.327	ENSPCIG00000010212	RPUSD4	91	51.327	Phascolarctos_cinereus
ENSPMEG00000017534	rpusd4	97	97.895	ENSPFOG00000019030	rpusd4	100	97.895	Poecilia_formosa
ENSPMEG00000017534	rpusd4	100	97.954	ENSPLAG00000016848	rpusd4	100	97.954	Poecilia_latipinna
ENSPMEG00000017534	rpusd4	100	95.349	ENSPREG00000005689	rpusd4	100	95.349	Poecilia_reticulata
ENSPMEG00000017534	rpusd4	88	48.000	ENSPPYG00000004043	RPUSD4	90	48.000	Pongo_abelii
ENSPMEG00000017534	rpusd4	69	52.459	ENSPCAG00000000753	RPUSD4	72	52.459	Procavia_capensis
ENSPMEG00000017534	rpusd4	87	47.399	ENSPCOG00000020694	RPUSD4	90	47.399	Propithecus_coquereli
ENSPMEG00000017534	rpusd4	88	47.839	ENSPVAG00000000988	RPUSD4	90	47.839	Pteropus_vampyrus
ENSPMEG00000017534	rpusd4	99	69.211	ENSPNYG00000009652	rpusd4	99	69.211	Pundamilia_nyererei
ENSPMEG00000017534	rpusd4	91	56.787	ENSPNAG00000012264	rpusd4	93	56.787	Pygocentrus_nattereri
ENSPMEG00000017534	rpusd4	86	50.000	ENSRNOG00000011567	Rpusd4	87	50.000	Rattus_norvegicus
ENSPMEG00000017534	rpusd4	86	48.256	ENSRBIG00000034842	RPUSD4	90	47.714	Rhinopithecus_bieti
ENSPMEG00000017534	rpusd4	86	48.256	ENSRROG00000039753	RPUSD4	90	47.714	Rhinopithecus_roxellana
ENSPMEG00000017534	rpusd4	87	46.667	ENSSBOG00000030413	RPUSD4	90	46.667	Saimiri_boliviensis_boliviensis
ENSPMEG00000017534	rpusd4	75	53.020	ENSSHAG00000008304	RPUSD4	97	53.020	Sarcophilus_harrisii
ENSPMEG00000017534	rpusd4	84	56.193	ENSSFOG00015006203	rpusd4	89	56.193	Scleropages_formosus
ENSPMEG00000017534	rpusd4	100	64.646	ENSSMAG00000020978	rpusd4	100	64.646	Scophthalmus_maximus
ENSPMEG00000017534	rpusd4	99	66.921	ENSSDUG00000013399	rpusd4	100	66.921	Seriola_dumerili
ENSPMEG00000017534	rpusd4	99	66.921	ENSSLDG00000023507	rpusd4	100	66.921	Seriola_lalandi_dorsalis
ENSPMEG00000017534	rpusd4	93	49.046	ENSSPUG00000001401	RPUSD4	98	49.322	Sphenodon_punctatus
ENSPMEG00000017534	rpusd4	100	68.528	ENSSPAG00000012163	rpusd4	100	68.528	Stegastes_partitus
ENSPMEG00000017534	rpusd4	87	47.536	ENSSSCG00000015233	RPUSD4	89	47.536	Sus_scrofa
ENSPMEG00000017534	rpusd4	76	50.000	ENSTGUG00000000773	RPUSD4	99	50.000	Taeniopygia_guttata
ENSPMEG00000017534	rpusd4	98	62.660	ENSTRUG00000012283	rpusd4	98	62.660	Takifugu_rubripes
ENSPMEG00000017534	rpusd4	99	63.544	ENSTNIG00000014676	rpusd4	100	63.544	Tetraodon_nigroviridis
ENSPMEG00000017534	rpusd4	82	49.846	ENSTTRG00000001555	RPUSD4	85	49.846	Tursiops_truncatus
ENSPMEG00000017534	rpusd4	88	48.851	ENSUMAG00000002219	RPUSD4	90	48.851	Ursus_maritimus
ENSPMEG00000017534	rpusd4	62	46.694	ENSVPAG00000001066	RPUSD4	88	46.694	Vicugna_pacos
ENSPMEG00000017534	rpusd4	78	51.780	ENSVVUG00000020101	RPUSD4	90	49.425	Vulpes_vulpes
ENSPMEG00000017534	rpusd4	100	92.327	ENSXCOG00000004676	rpusd4	100	92.327	Xiphophorus_couchianus
ENSPMEG00000017534	rpusd4	100	92.327	ENSXMAG00000023351	rpusd4	100	92.327	Xiphophorus_maculatus