EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMEG00000017597 (Gene tree)
Gene ID: 106925381
Gene Symbol: rbfox1l
Alias: -
Full Name: RNA binding protein fox-1 homolog 1-like
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Plus strand
Length: 12366 bases
Position: chrKQ551754.1:127792-140157
Accession: 106925381
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000030870	Fox-1_C	PF12414.8	6.6e-18	1	1
ENSPMEP00000030870	RRM_1	PF00076.22	9.6e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000023264	-	1095	XM_014999686	ENSPMEP00000030870	364 (aa)	XP_014855172	-

Gene Model

Click here to download ENSPMEG00000017597's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000017597's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMEG00000017597	rbfox1l	55	57.322	ENSPMEG00000007320	rbfox2	100	57.563
ENSPMEG00000017597	rbfox1l	84	46.646	ENSPMEG00000022997	rbfox3b	90	48.515
ENSPMEG00000017597	rbfox1l	55	53.306	ENSPMEG00000013663	-	100	55.372

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000017597	rbfox1l	97	84.906	ENSAPOG00000016304	rbfox1l	98	85.714	Acanthochromis_polyacanthus
ENSPMEG00000017597	rbfox1l	100	82.880	ENSACIG00000006441	rbfox1l	100	82.337	Amphilophus_citrinellus
ENSPMEG00000017597	rbfox1l	82	91.030	ENSAOCG00000020938	rbfox1l	99	91.250	Amphiprion_ocellaris
ENSPMEG00000017597	rbfox1l	100	90.164	ENSAPEG00000008232	rbfox1l	100	90.437	Amphiprion_percula
ENSPMEG00000017597	rbfox1l	100	86.016	ENSATEG00000022649	rbfox1l	100	86.016	Anabas_testudineus
ENSPMEG00000017597	rbfox1l	63	68.526	ENSACAG00000011931	-	91	68.651	Anolis_carolinensis
ENSPMEG00000017597	rbfox1l	100	84.595	ENSACLG00000021394	rbfox1l	100	84.595	Astatotilapia_calliptera
ENSPMEG00000017597	rbfox1l	100	79.793	ENSAMXG00000010470	rbfox1l	100	80.829	Astyanax_mexicanus
ENSPMEG00000017597	rbfox1l	100	53.230	ENSCPBG00000010944	-	100	56.041	Chrysemys_picta_bellii
ENSPMEG00000017597	rbfox1l	100	81.510	ENSCSEG00000018898	rbfox1l	100	81.250	Cynoglossus_semilaevis
ENSPMEG00000017597	rbfox1l	100	89.295	ENSCVAG00000007986	rbfox1l	100	89.295	Cyprinodon_variegatus
ENSPMEG00000017597	rbfox1l	100	76.943	ENSDARG00000021184	rbfox1l	100	78.756	Danio_rerio
ENSPMEG00000017597	rbfox1l	100	78.117	ENSELUG00000015077	rbfox1l	100	78.372	Esox_lucius
ENSPMEG00000017597	rbfox1l	100	74.863	ENSFHEG00000016557	rbfox1l	100	74.590	Fundulus_heteroclitus
ENSPMEG00000017597	rbfox1l	100	78.068	ENSGMOG00000005040	rbfox1l	100	78.068	Gadus_morhua
ENSPMEG00000017597	rbfox1l	92	92.898	ENSGAFG00000013211	rbfox1l	97	92.898	Gambusia_affinis
ENSPMEG00000017597	rbfox1l	100	84.595	ENSGACG00000010757	rbfox1l	100	84.595	Gasterosteus_aculeatus
ENSPMEG00000017597	rbfox1l	64	65.737	ENSGAGG00000012440	-	87	68.110	Gopherus_agassizii
ENSPMEG00000017597	rbfox1l	100	84.595	ENSHBUG00000013406	rbfox1l	100	84.595	Haplochromis_burtoni
ENSPMEG00000017597	rbfox1l	100	80.208	ENSHCOG00000020771	rbfox1l	100	81.250	Hippocampus_comes
ENSPMEG00000017597	rbfox1l	99	71.990	ENSIPUG00000000065	rbfox1l	99	75.978	Ictalurus_punctatus
ENSPMEG00000017597	rbfox1l	100	85.195	ENSKMAG00000005146	rbfox1l	100	85.714	Kryptolebias_marmoratus
ENSPMEG00000017597	rbfox1l	100	85.901	ENSLBEG00000017089	rbfox1l	100	86.423	Labrus_bergylta
ENSPMEG00000017597	rbfox1l	100	85.640	ENSMAMG00000019480	rbfox1l	100	86.423	Mastacembelus_armatus
ENSPMEG00000017597	rbfox1l	100	84.595	ENSMZEG00005016374	rbfox1l	100	84.595	Maylandia_zebra
ENSPMEG00000017597	rbfox1l	100	83.029	ENSMMOG00000016530	rbfox1l	100	83.029	Mola_mola
ENSPMEG00000017597	rbfox1l	100	81.462	ENSMALG00000009384	rbfox1l	100	81.723	Monopterus_albus
ENSPMEG00000017597	rbfox1l	100	83.551	ENSNBRG00000003346	rbfox1l	100	83.551	Neolamprologus_brichardi
ENSPMEG00000017597	rbfox1l	100	85.117	ENSONIG00000012754	rbfox1l	100	85.117	Oreochromis_niloticus
ENSPMEG00000017597	rbfox1l	100	85.379	ENSORLG00000011269	rbfox1l	100	85.640	Oryzias_latipes
ENSPMEG00000017597	rbfox1l	100	85.640	ENSORLG00020000162	rbfox1l	100	86.162	Oryzias_latipes_hni
ENSPMEG00000017597	rbfox1l	100	85.640	ENSORLG00015013464	rbfox1l	100	86.162	Oryzias_latipes_hsok
ENSPMEG00000017597	rbfox1l	100	85.901	ENSOMEG00000010584	rbfox1l	100	86.162	Oryzias_melastigma
ENSPMEG00000017597	rbfox1l	100	80.990	ENSPKIG00000012029	rbfox1l	100	81.771	Paramormyrops_kingsleyae
ENSPMEG00000017597	rbfox1l	100	76.042	ENSPMGG00000012082	rbfox1l	100	76.823	Periophthalmus_magnuspinnatus
ENSPMEG00000017597	rbfox1l	100	95.013	ENSPFOG00000009338	rbfox1l	100	95.013	Poecilia_formosa
ENSPMEG00000017597	rbfox1l	85	87.261	ENSPLAG00000012816	rbfox1l	99	87.261	Poecilia_latipinna
ENSPMEG00000017597	rbfox1l	100	98.626	ENSPREG00000007940	rbfox1l	100	98.626	Poecilia_reticulata
ENSPMEG00000017597	rbfox1l	100	84.856	ENSPNYG00000002098	rbfox1l	100	84.856	Pundamilia_nyererei
ENSPMEG00000017597	rbfox1l	100	77.003	ENSPNAG00000001620	rbfox1l	100	79.845	Pygocentrus_nattereri
ENSPMEG00000017597	rbfox1l	100	78.182	ENSSFOG00015000675	rbfox1l	100	78.961	Scleropages_formosus
ENSPMEG00000017597	rbfox1l	100	82.461	ENSSMAG00000013090	rbfox1l	100	82.723	Scophthalmus_maximus
ENSPMEG00000017597	rbfox1l	100	83.805	ENSSDUG00000008705	rbfox1l	100	84.576	Seriola_dumerili
ENSPMEG00000017597	rbfox1l	100	84.021	ENSSLDG00000022256	rbfox1l	100	85.052	Seriola_lalandi_dorsalis
ENSPMEG00000017597	rbfox1l	100	89.891	ENSSPAG00000016620	rbfox1l	100	90.164	Stegastes_partitus
ENSPMEG00000017597	rbfox1l	96	79.133	ENSTRUG00000015905	rbfox1l	100	79.730	Takifugu_rubripes
ENSPMEG00000017597	rbfox1l	63	76.866	ENSTNIG00000008088	rbfox1l	100	76.952	Tetraodon_nigroviridis
ENSPMEG00000017597	rbfox1l	100	93.963	ENSXMAG00000023471	rbfox1l	100	93.963	Xiphophorus_maculatus