EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMEG00000017750 (Gene tree)
Gene ID: 106907840
Gene Symbol: -
Alias: -
Full Name: protein sister of odd and bowel-like
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Minus strand
Length: 8514 bases
Position: chrKQ553628.1:84757-93270
Accession: 106907840
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000030962	zf-C2H2	PF00096.26	1.4e-18	1	2
ENSPMEP00000030962	zf-C2H2	PF00096.26	1.4e-18	2	2
ENSPMEP00000030962	zf-met	PF12874.7	4.5e-07	1	2
ENSPMEP00000030962	zf-met	PF12874.7	4.5e-07	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000023477	-	5168	XM_014973715	ENSPMEP00000030962	482 (aa)	XP_014829201	UPI00072E9715

Gene Model

Click here to download ENSPMEG00000017750's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000017750's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMEG00000017750	-	51	40.000	ENSPMEG00000009213	-	50	40.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000017750	-	81	75.567	ENSCVAG00000015081	-	96	72.544	Cyprinodon_variegatus
ENSPMEG00000017750	-	100	81.010	ENSFHEG00000003423	-	100	80.202	Fundulus_heteroclitus
ENSPMEG00000017750	-	60	42.553	ENSKMAG00000000795	-	99	42.553	Kryptolebias_marmoratus
ENSPMEG00000017750	-	100	99.170	ENSPLAG00000009442	-	100	99.170	Poecilia_latipinna
ENSPMEG00000017750	-	100	99.170	ENSPLAG00000016258	-	100	99.170	Poecilia_latipinna
ENSPMEG00000017750	-	61	45.122	ENSSDUG00000023762	-	67	45.122	Seriola_dumerili
ENSPMEG00000017750	-	51	50.000	ENSXCOG00000001200	-	89	51.471	Xiphophorus_couchianus