EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPMEG00000017808 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Poecilia_mexicana
Status
putative
Strand
Minus strand
Length
6455 bases
Position
chrKQ550987.1:121268-127722
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPMEP00000014460Ribosomal_S27ePF01667.175.6e-2211
ENSPMEP00000030019Ribosomal_S27ePF01667.178.3e-2211
ENSPMEP00000014372Ribosomal_S27ePF01667.171.2e-2111
ENSPMEP00000029964Ribosomal_S27ePF01667.172.1e-2111
ENSPMEP00000030073Ribosomal_S27ePF01667.172.4e-2111
ENSPMEP00000013904Ribosomal_S27ePF01667.173.3e-2111
ENSPMEP00000013896Ribosomal_S27ePF01667.173.3e-2111
ENSPMEP00000013910Ribosomal_S27ePF01667.173.8e-2111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPMET00000021725-279-ENSPMEP0000003007392 (aa)--
ENSPMET00000021748-387-ENSPMEP00000013910128 (aa)--
ENSPMET00000022461-312-ENSPMEP00000014460103 (aa)--
ENSPMET00000032390-363-ENSPMEP00000013904120 (aa)--
ENSPMET00000021734-363-ENSPMEP00000013896120 (aa)--
ENSPMET00000021850-300-ENSPMEP0000002996499 (aa)--
ENSPMET00000022344-282-ENSPMEP0000001437293 (aa)--
ENSPMET00000032356-270-ENSPMEP0000003001989 (aa)--
Gene Model
Click here to download ENSPMEG00000017808's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000017808's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPMEG00000017808-9268.235ENSPMEG00000013791-10068.235
ENSPMEG00000017808-9268.235ENSPMEG00000007989-10068.235
ENSPMEG00000017808-9268.235ENSPMEG00000022957-10068.235
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPMEG00000017808-9164.286WBGene00004496rps-2710064.286Caenorhabditis_elegans
ENSPMEG00000017808-9068.675FBgn0039300RpS279868.675Drosophila_melanogaster
ENSPMEG00000017808-8390.789ENSFHEG00000004295-5590.789Fundulus_heteroclitus
ENSPMEG00000017808-9092.771ENSGAFG00000016054-5598.684Gambusia_affinis
ENSPMEG00000017808-8874.074ENSGACG00000011286-9474.074Gasterosteus_aculeatus
ENSPMEG00000017808-9071.084ENSMMOG00000020318-9971.084Mola_mola
ENSPMEG00000017808-8694.937ENSPFOG00000004190-9894.937Poecilia_formosa
ENSPMEG00000017808-9093.976ENSPLAG00000023590-9893.976Poecilia_latipinna
ENSPMEG00000017808-9093.976ENSPLAG00000013332-9893.976Poecilia_latipinna
ENSPMEG00000017808-8360.526YKL156WRPS27A9858.750Saccharomyces_cerevisiae
ENSPMEG00000017808-8359.211YHR021CRPS27B9857.500Saccharomyces_cerevisiae
ENSPMEG00000017808-8565.385ENSSLDG00000003982-8865.385Seriola_lalandi_dorsalis
ENSPMEG00000017808-8892.593ENSXCOG00000010263-9692.593Xiphophorus_couchianus
ENSPMEG00000017808-8594.872ENSXMAG00000003387-9791.566Xiphophorus_maculatus

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