EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMEG00000017857 (Gene tree)
Gene ID: 106915510
Gene Symbol: si:dkey-85a20.4
Alias: -
Full Name: TAR (HIV-1) RNA binding protein 1
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Plus strand
Length: 12960 bases
Position: chrKQ551147.1:261646-274605
Accession: 106915510
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000015362	SpoU_methylase	PF00588.19	7.6e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000023595	-	5773	XM_014983145	ENSPMEP00000015362	1626 (aa)	XP_014838631	UPI00072E3392

Gene Model

Click here to download ENSPMEG00000017857's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000017857's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000017857	si:dkey-85a20.4	85	44.958	ENSG00000059588	TARBP1	99	42.026	Homo_sapiens
ENSPMEG00000017857	si:dkey-85a20.4	99	75.138	ENSAPOG00000016419	si:dkey-85a20.4	99	75.077	Acanthochromis_polyacanthus
ENSPMEG00000017857	si:dkey-85a20.4	84	44.412	ENSAMEG00000003359	TARBP1	99	44.597	Ailuropoda_melanoleuca
ENSPMEG00000017857	si:dkey-85a20.4	99	70.336	ENSATEG00000020266	si:dkey-85a20.4	99	70.404	Anabas_testudineus
ENSPMEG00000017857	si:dkey-85a20.4	83	45.513	ENSAPLG00000007666	TARBP1	99	46.067	Anas_platyrhynchos
ENSPMEG00000017857	si:dkey-85a20.4	99	39.828	ENSACAG00000001142	TARBP1	99	40.330	Anolis_carolinensis
ENSPMEG00000017857	si:dkey-85a20.4	86	44.171	ENSANAG00000022031	TARBP1	89	44.382	Aotus_nancymaae
ENSPMEG00000017857	si:dkey-85a20.4	80	54.795	ENSBTAG00000004517	TARBP1	99	54.795	Bos_taurus
ENSPMEG00000017857	si:dkey-85a20.4	99	41.876	ENSCJAG00000018155	TARBP1	99	41.935	Callithrix_jacchus
ENSPMEG00000017857	si:dkey-85a20.4	85	45.000	ENSCAFG00000011533	TARBP1	98	44.901	Canis_familiaris
ENSPMEG00000017857	si:dkey-85a20.4	85	45.025	ENSCAFG00020027141	TARBP1	99	41.503	Canis_lupus_dingo
ENSPMEG00000017857	si:dkey-85a20.4	87	44.276	ENSCHIG00000011437	TARBP1	99	41.767	Capra_hircus
ENSPMEG00000017857	si:dkey-85a20.4	82	44.217	ENSTSYG00000010382	TARBP1	99	44.363	Carlito_syrichta
ENSPMEG00000017857	si:dkey-85a20.4	78	41.693	ENSCAPG00000010831	TARBP1	99	41.608	Cavia_aperea
ENSPMEG00000017857	si:dkey-85a20.4	85	43.595	ENSCPOG00000013995	TARBP1	99	40.508	Cavia_porcellus
ENSPMEG00000017857	si:dkey-85a20.4	85	45.230	ENSCCAG00000037278	TARBP1	99	41.906	Cebus_capucinus
ENSPMEG00000017857	si:dkey-85a20.4	85	45.050	ENSCATG00000011754	TARBP1	99	41.727	Cercocebus_atys
ENSPMEG00000017857	si:dkey-85a20.4	80	43.961	ENSCLAG00000003655	TARBP1	96	44.120	Chinchilla_lanigera
ENSPMEG00000017857	si:dkey-85a20.4	79	45.622	ENSCSAG00000010100	TARBP1	99	45.699	Chlorocebus_sabaeus
ENSPMEG00000017857	si:dkey-85a20.4	78	44.780	ENSCPBG00000005587	TARBP1	97	40.856	Chrysemys_picta_bellii
ENSPMEG00000017857	si:dkey-85a20.4	83	45.224	ENSCANG00000034343	TARBP1	99	45.297	Colobus_angolensis_palliatus
ENSPMEG00000017857	si:dkey-85a20.4	85	43.839	ENSCGRG00001016690	Tarbp1	87	43.617	Cricetulus_griseus_chok1gshd
ENSPMEG00000017857	si:dkey-85a20.4	85	43.768	ENSCGRG00000016893	Tarbp1	94	43.546	Cricetulus_griseus_crigri
ENSPMEG00000017857	si:dkey-85a20.4	99	61.685	ENSCSEG00000005255	si:dkey-85a20.4	99	66.176	Cynoglossus_semilaevis
ENSPMEG00000017857	si:dkey-85a20.4	99	54.681	ENSDARG00000079055	si:dkey-85a20.4	99	68.912	Danio_rerio
ENSPMEG00000017857	si:dkey-85a20.4	91	43.097	ENSDNOG00000008637	TARBP1	99	41.426	Dasypus_novemcinctus
ENSPMEG00000017857	si:dkey-85a20.4	80	44.428	ENSDORG00000007984	Tarbp1	100	44.815	Dipodomys_ordii
ENSPMEG00000017857	si:dkey-85a20.4	85	45.480	ENSEASG00005000252	TARBP1	99	41.897	Equus_asinus_asinus
ENSPMEG00000017857	si:dkey-85a20.4	85	45.209	ENSECAG00000023673	TARBP1	99	46.464	Equus_caballus
ENSPMEG00000017857	si:dkey-85a20.4	99	58.175	ENSELUG00000012193	si:dkey-85a20.4	99	58.175	Esox_lucius
ENSPMEG00000017857	si:dkey-85a20.4	85	43.027	ENSFCAG00000014183	TARBP1	99	39.976	Felis_catus
ENSPMEG00000017857	si:dkey-85a20.4	80	46.212	ENSFALG00000013565	TARBP1	99	46.125	Ficedula_albicollis
ENSPMEG00000017857	si:dkey-85a20.4	79	43.018	ENSFDAG00000001308	TARBP1	99	43.168	Fukomys_damarensis
ENSPMEG00000017857	si:dkey-85a20.4	100	69.779	ENSFHEG00000007565	si:dkey-85a20.4	99	81.067	Fundulus_heteroclitus
ENSPMEG00000017857	si:dkey-85a20.4	85	60.956	ENSGMOG00000004549	si:dkey-85a20.4	99	61.099	Gadus_morhua
ENSPMEG00000017857	si:dkey-85a20.4	84	44.006	ENSGALG00000011000	TARBP1	99	40.901	Gallus_gallus
ENSPMEG00000017857	si:dkey-85a20.4	100	93.665	ENSGAFG00000007387	si:dkey-85a20.4	100	93.665	Gambusia_affinis
ENSPMEG00000017857	si:dkey-85a20.4	86	70.613	ENSGACG00000005865	si:dkey-85a20.4	99	70.472	Gasterosteus_aculeatus
ENSPMEG00000017857	si:dkey-85a20.4	84	46.385	ENSGAGG00000012102	TARBP1	89	46.143	Gopherus_agassizii
ENSPMEG00000017857	si:dkey-85a20.4	84	44.181	ENSGGOG00000022879	TARBP1	99	44.397	Gorilla_gorilla
ENSPMEG00000017857	si:dkey-85a20.4	99	74.001	ENSHBUG00000008877	si:dkey-85a20.4	99	74.001	Haplochromis_burtoni
ENSPMEG00000017857	si:dkey-85a20.4	85	43.590	ENSHGLG00000011592	TARBP1	99	40.426	Heterocephalus_glaber_female
ENSPMEG00000017857	si:dkey-85a20.4	85	43.808	ENSHGLG00100015169	TARBP1	95	43.737	Heterocephalus_glaber_male
ENSPMEG00000017857	si:dkey-85a20.4	97	56.003	ENSIPUG00000005249	si:dkey-85a20.4	98	51.852	Ictalurus_punctatus
ENSPMEG00000017857	si:dkey-85a20.4	82	44.802	ENSSTOG00000032291	TARBP1	96	44.696	Ictidomys_tridecemlineatus
ENSPMEG00000017857	si:dkey-85a20.4	85	42.340	ENSJJAG00000017840	Tarbp1	95	41.990	Jaculus_jaculus
ENSPMEG00000017857	si:dkey-85a20.4	89	71.255	ENSKMAG00000017546	si:dkey-85a20.4	98	71.255	Kryptolebias_marmoratus
ENSPMEG00000017857	si:dkey-85a20.4	82	73.200	ENSLBEG00000012132	si:dkey-85a20.4	94	72.800	Labrus_bergylta
ENSPMEG00000017857	si:dkey-85a20.4	99	43.690	ENSLACG00000004337	TARBP1	99	43.690	Latimeria_chalumnae
ENSPMEG00000017857	si:dkey-85a20.4	99	52.848	ENSLOCG00000016214	si:dkey-85a20.4	100	52.848	Lepisosteus_oculatus
ENSPMEG00000017857	si:dkey-85a20.4	85	44.857	ENSLAFG00000011394	TARBP1	88	44.965	Loxodonta_africana
ENSPMEG00000017857	si:dkey-85a20.4	85	43.763	ENSMFAG00000041068	TARBP1	99	40.616	Macaca_fascicularis
ENSPMEG00000017857	si:dkey-85a20.4	85	43.693	ENSMMUG00000021703	TARBP1	99	40.478	Macaca_mulatta
ENSPMEG00000017857	si:dkey-85a20.4	85	45.120	ENSMNEG00000045002	TARBP1	99	41.727	Macaca_nemestrina
ENSPMEG00000017857	si:dkey-85a20.4	83	45.700	ENSMLEG00000044182	TARBP1	99	45.773	Mandrillus_leucophaeus
ENSPMEG00000017857	si:dkey-85a20.4	99	68.363	ENSMAMG00000021760	si:dkey-85a20.4	99	68.363	Mastacembelus_armatus
ENSPMEG00000017857	si:dkey-85a20.4	99	73.694	ENSMZEG00005005751	si:dkey-85a20.4	99	73.694	Maylandia_zebra
ENSPMEG00000017857	si:dkey-85a20.4	85	43.935	ENSMAUG00000020968	Tarbp1	87	43.715	Mesocricetus_auratus
ENSPMEG00000017857	si:dkey-85a20.4	87	40.109	ENSMICG00000015280	TARBP1	99	38.047	Microcebus_murinus
ENSPMEG00000017857	si:dkey-85a20.4	85	43.790	ENSMOCG00000004128	Tarbp1	87	43.639	Microtus_ochrogaster
ENSPMEG00000017857	si:dkey-85a20.4	99	66.377	ENSMMOG00000007795	si:dkey-85a20.4	99	66.066	Mola_mola
ENSPMEG00000017857	si:dkey-85a20.4	85	44.051	ENSMODG00000008504	TARBP1	99	40.906	Monodelphis_domestica
ENSPMEG00000017857	si:dkey-85a20.4	99	68.346	ENSMALG00000002916	si:dkey-85a20.4	99	68.346	Monopterus_albus
ENSPMEG00000017857	si:dkey-85a20.4	85	43.630	MGP_CAROLIEiJ_G0031729	Tarbp1	78	59.231	Mus_caroli
ENSPMEG00000017857	si:dkey-85a20.4	85	43.940	ENSMUSG00000090290	Tarbp1	87	43.790	Mus_musculus
ENSPMEG00000017857	si:dkey-85a20.4	85	44.484	MGP_PahariEiJ_G0023326	Tarbp1	87	44.413	Mus_pahari
ENSPMEG00000017857	si:dkey-85a20.4	85	43.932	MGP_SPRETEiJ_G0032846	Tarbp1	87	43.861	Mus_spretus
ENSPMEG00000017857	si:dkey-85a20.4	76	45.404	ENSMPUG00000002802	TARBP1	99	45.404	Mustela_putorius_furo
ENSPMEG00000017857	si:dkey-85a20.4	83	43.531	ENSMLUG00000002414	TARBP1	99	43.674	Myotis_lucifugus
ENSPMEG00000017857	si:dkey-85a20.4	85	45.000	ENSNLEG00000002518	TARBP1	99	41.966	Nomascus_leucogenys
ENSPMEG00000017857	si:dkey-85a20.4	65	56.383	ENSMEUG00000011370	-	65	56.170	Notamacropus_eugenii
ENSPMEG00000017857	si:dkey-85a20.4	68	53.245	ENSOPRG00000013822	TARBP1	68	53.245	Ochotona_princeps
ENSPMEG00000017857	si:dkey-85a20.4	85	43.710	ENSODEG00000005238	TARBP1	89	43.852	Octodon_degus
ENSPMEG00000017857	si:dkey-85a20.4	85	75.356	ENSONIG00000009789	si:dkey-85a20.4	100	75.427	Oreochromis_niloticus
ENSPMEG00000017857	si:dkey-85a20.4	85	44.240	ENSOCUG00000017418	TARBP1	99	40.947	Oryctolagus_cuniculus
ENSPMEG00000017857	si:dkey-85a20.4	99	67.793	ENSORLG00000010529	si:dkey-85a20.4	99	67.855	Oryzias_latipes
ENSPMEG00000017857	si:dkey-85a20.4	99	67.486	ENSORLG00020019264	si:dkey-85a20.4	99	67.548	Oryzias_latipes_hni
ENSPMEG00000017857	si:dkey-85a20.4	99	67.363	ENSORLG00015003276	si:dkey-85a20.4	99	67.425	Oryzias_latipes_hsok
ENSPMEG00000017857	si:dkey-85a20.4	87	42.750	ENSOGAG00000002379	TARBP1	99	40.251	Otolemur_garnettii
ENSPMEG00000017857	si:dkey-85a20.4	87	44.237	ENSOARG00000003434	TARBP1	98	43.016	Ovis_aries
ENSPMEG00000017857	si:dkey-85a20.4	83	45.633	ENSPPAG00000028097	TARBP1	99	45.924	Pan_paniscus
ENSPMEG00000017857	si:dkey-85a20.4	81	45.563	ENSPPRG00000013561	TARBP1	88	45.455	Panthera_pardus
ENSPMEG00000017857	si:dkey-85a20.4	82	44.825	ENSPTIG00000009281	TARBP1	99	44.704	Panthera_tigris_altaica
ENSPMEG00000017857	si:dkey-85a20.4	85	45.423	ENSPTRG00000002124	TARBP1	99	42.216	Pan_troglodytes
ENSPMEG00000017857	si:dkey-85a20.4	85	45.050	ENSPANG00000021933	TARBP1	99	41.667	Papio_anubis
ENSPMEG00000017857	si:dkey-85a20.4	99	56.242	ENSPKIG00000016716	si:dkey-85a20.4	99	56.242	Paramormyrops_kingsleyae
ENSPMEG00000017857	si:dkey-85a20.4	79	45.817	ENSPSIG00000010699	TARBP1	99	45.894	Pelodiscus_sinensis
ENSPMEG00000017857	si:dkey-85a20.4	85	44.429	ENSPEMG00000006888	Tarbp1	92	44.208	Peromyscus_maniculatus_bairdii
ENSPMEG00000017857	si:dkey-85a20.4	90	70.051	ENSPCIG00000029710	TARBP1	98	70.051	Phascolarctos_cinereus
ENSPMEG00000017857	si:dkey-85a20.4	86	98.643	ENSPFOG00000013020	si:dkey-85a20.4	100	98.643	Poecilia_formosa
ENSPMEG00000017857	si:dkey-85a20.4	100	98.524	ENSPLAG00000006044	si:dkey-85a20.4	100	98.524	Poecilia_latipinna
ENSPMEG00000017857	si:dkey-85a20.4	100	95.326	ENSPREG00000022753	si:dkey-85a20.4	100	95.326	Poecilia_reticulata
ENSPMEG00000017857	si:dkey-85a20.4	77	44.943	ENSPPYG00000000102	TARBP1	99	45.207	Pongo_abelii
ENSPMEG00000017857	si:dkey-85a20.4	67	75.658	ENSPCAG00000004808	TARBP1	72	75.658	Procavia_capensis
ENSPMEG00000017857	si:dkey-85a20.4	85	43.270	ENSPCOG00000005666	TARBP1	91	41.749	Propithecus_coquereli
ENSPMEG00000017857	si:dkey-85a20.4	81	60.563	ENSPVAG00000014798	TARBP1	94	38.061	Pteropus_vampyrus
ENSPMEG00000017857	si:dkey-85a20.4	99	70.854	ENSPNYG00000019135	si:dkey-85a20.4	99	70.854	Pundamilia_nyererei
ENSPMEG00000017857	si:dkey-85a20.4	85	42.161	ENSRNOG00000053574	Tarbp1	87	42.090	Rattus_norvegicus
ENSPMEG00000017857	si:dkey-85a20.4	85	42.564	ENSRBIG00000043362	TARBP1	94	42.465	Rhinopithecus_bieti
ENSPMEG00000017857	si:dkey-85a20.4	85	45.050	ENSRROG00000029527	TARBP1	89	45.120	Rhinopithecus_roxellana
ENSPMEG00000017857	si:dkey-85a20.4	83	45.255	ENSSBOG00000034503	TARBP1	96	45.541	Saimiri_boliviensis_boliviensis
ENSPMEG00000017857	si:dkey-85a20.4	83	44.785	ENSSHAG00000000013	TARBP1	99	44.865	Sarcophilus_harrisii
ENSPMEG00000017857	si:dkey-85a20.4	99	52.150	ENSSFOG00015002660	si:dkey-85a20.4	97	58.717	Scleropages_formosus
ENSPMEG00000017857	si:dkey-85a20.4	99	68.984	ENSSMAG00000007081	si:dkey-85a20.4	99	69.045	Scophthalmus_maximus
ENSPMEG00000017857	si:dkey-85a20.4	99	69.797	ENSSDUG00000023566	si:dkey-85a20.4	99	69.982	Seriola_dumerili
ENSPMEG00000017857	si:dkey-85a20.4	99	73.264	ENSSLDG00000020200	si:dkey-85a20.4	100	73.387	Seriola_lalandi_dorsalis
ENSPMEG00000017857	si:dkey-85a20.4	76	57.991	ENSSARG00000012207	TARBP1	75	57.763	Sorex_araneus
ENSPMEG00000017857	si:dkey-85a20.4	85	43.834	ENSSPUG00000015364	TARBP1	99	40.970	Sphenodon_punctatus
ENSPMEG00000017857	si:dkey-85a20.4	99	75.260	ENSSPAG00000007213	si:dkey-85a20.4	99	75.214	Stegastes_partitus
ENSPMEG00000017857	si:dkey-85a20.4	96	45.026	ENSSSCG00000010160	TARBP1	99	45.288	Sus_scrofa
ENSPMEG00000017857	si:dkey-85a20.4	80	45.571	ENSTGUG00000010214	TARBP1	100	45.571	Taeniopygia_guttata
ENSPMEG00000017857	si:dkey-85a20.4	94	63.288	ENSTNIG00000016586	si:dkey-85a20.4	99	68.933	Tetraodon_nigroviridis
ENSPMEG00000017857	si:dkey-85a20.4	79	40.823	ENSTTRG00000008707	TARBP1	85	41.106	Tursiops_truncatus
ENSPMEG00000017857	si:dkey-85a20.4	80	44.694	ENSUMAG00000006730	TARBP1	97	44.810	Ursus_maritimus
ENSPMEG00000017857	si:dkey-85a20.4	63	74.468	ENSVPAG00000007665	TARBP1	73	74.468	Vicugna_pacos
ENSPMEG00000017857	si:dkey-85a20.4	84	45.221	ENSVVUG00000007460	TARBP1	99	44.397	Vulpes_vulpes
ENSPMEG00000017857	si:dkey-85a20.4	83	42.960	ENSXETG00000016224	tarbp1	99	42.878	Xenopus_tropicalis
ENSPMEG00000017857	si:dkey-85a20.4	84	86.968	ENSXCOG00000011779	si:dkey-85a20.4	100	86.839	Xiphophorus_couchianus
ENSPMEG00000017857	si:dkey-85a20.4	64	94.561	ENSXMAG00000009600	si:dkey-85a20.4	100	94.561	Xiphophorus_maculatus