EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMEG00000018033 (Gene tree)
Gene ID: 106926008
Gene Symbol: snrnp48
Alias: -
Full Name: small nuclear ribonucleoprotein U11/U12 subunit 48
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Minus strand
Length: 4942 bases
Position: chrKQ551804.1:179044-183985
Accession: 106926008
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000015504	zf-U11-48K	PF05253.12	6.8e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000023803	-	1295	XM_015000631	ENSPMEP00000015504	342 (aa)	XP_014856117	UPI00072E61D1

Gene Model

Click here to download ENSPMEG00000018033's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000018033's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000018033	snrnp48	81	44.479	ENSG00000168566	SNRNP48	73	51.394	Homo_sapiens
ENSPMEG00000018033	snrnp48	96	75.610	ENSAPOG00000021430	snrnp48	95	76.074	Acanthochromis_polyacanthus
ENSPMEG00000018033	snrnp48	92	43.243	ENSAMEG00000017349	SNRNP48	71	49.798	Ailuropoda_melanoleuca
ENSPMEG00000018033	snrnp48	94	71.028	ENSACIG00000002032	snrnp48	95	71.166	Amphilophus_citrinellus
ENSPMEG00000018033	snrnp48	95	73.926	ENSAOCG00000010562	snrnp48	95	74.540	Amphiprion_ocellaris
ENSPMEG00000018033	snrnp48	95	74.233	ENSAPEG00000003231	snrnp48	95	74.847	Amphiprion_percula
ENSPMEG00000018033	snrnp48	93	75.701	ENSATEG00000020210	snrnp48	94	76.324	Anabas_testudineus
ENSPMEG00000018033	snrnp48	81	49.660	ENSACAG00000002811	SNRNP48	87	45.638	Anolis_carolinensis
ENSPMEG00000018033	snrnp48	81	45.092	ENSANAG00000033538	SNRNP48	73	51.793	Aotus_nancymaae
ENSPMEG00000018033	snrnp48	94	57.187	ENSAMXG00000015309	snrnp48	78	65.134	Astyanax_mexicanus
ENSPMEG00000018033	snrnp48	92	43.284	ENSBTAG00000001123	SNRNP48	73	48.606	Bos_taurus
ENSPMEG00000018033	snrnp48	93	44.675	ENSCJAG00000021330	SNRNP48	95	44.512	Callithrix_jacchus
ENSPMEG00000018033	snrnp48	92	43.844	ENSCAFG00000009574	SNRNP48	67	47.826	Canis_familiaris
ENSPMEG00000018033	snrnp48	92	43.844	ENSCAFG00020013203	SNRNP48	72	49.597	Canis_lupus_dingo
ENSPMEG00000018033	snrnp48	92	43.582	ENSCHIG00000015216	SNRNP48	73	49.402	Capra_hircus
ENSPMEG00000018033	snrnp48	81	43.252	ENSTSYG00000000698	SNRNP48	73	50.996	Carlito_syrichta
ENSPMEG00000018033	snrnp48	87	43.987	ENSCAPG00000006768	SNRNP48	83	47.471	Cavia_aperea
ENSPMEG00000018033	snrnp48	93	44.675	ENSCPOG00000007910	SNRNP48	82	47.670	Cavia_porcellus
ENSPMEG00000018033	snrnp48	80	44.582	ENSCCAG00000035652	SNRNP48	73	51.210	Cebus_capucinus
ENSPMEG00000018033	snrnp48	93	44.807	ENSCATG00000033947	SNRNP48	73	50.996	Cercocebus_atys
ENSPMEG00000018033	snrnp48	93	44.379	ENSCLAG00000003765	SNRNP48	95	44.512	Chinchilla_lanigera
ENSPMEG00000018033	snrnp48	81	44.785	ENSCSAG00000007409	SNRNP48	73	51.793	Chlorocebus_sabaeus
ENSPMEG00000018033	snrnp48	83	47.525	ENSCPBG00000019146	SNRNP48	66	54.502	Chrysemys_picta_bellii
ENSPMEG00000018033	snrnp48	81	44.785	ENSCANG00000030017	SNRNP48	73	51.793	Colobus_angolensis_palliatus
ENSPMEG00000018033	snrnp48	84	41.156	ENSCGRG00001008805	-	80	43.359	Cricetulus_griseus_chok1gshd
ENSPMEG00000018033	snrnp48	93	44.248	ENSCGRG00001001076	-	75	49.609	Cricetulus_griseus_chok1gshd
ENSPMEG00000018033	snrnp48	93	44.248	ENSCGRG00000007781	Snrnp48	75	49.609	Cricetulus_griseus_crigri
ENSPMEG00000018033	snrnp48	75	70.703	ENSCSEG00000000722	snrnp48	76	69.030	Cynoglossus_semilaevis
ENSPMEG00000018033	snrnp48	92	83.067	ENSCVAG00000019829	snrnp48	72	85.971	Cyprinodon_variegatus
ENSPMEG00000018033	snrnp48	92	54.062	ENSDARG00000039989	snrnp48	79	57.778	Danio_rerio
ENSPMEG00000018033	snrnp48	80	46.786	ENSDNOG00000014978	SNRNP48	81	42.857	Dasypus_novemcinctus
ENSPMEG00000018033	snrnp48	93	43.452	ENSDORG00000015140	Snrnp48	74	50.000	Dipodomys_ordii
ENSPMEG00000018033	snrnp48	80	47.163	ENSEASG00005012021	SNRNP48	73	50.996	Equus_asinus_asinus
ENSPMEG00000018033	snrnp48	80	47.163	ENSECAG00000026937	SNRNP48	73	50.996	Equus_caballus
ENSPMEG00000018033	snrnp48	93	31.045	ENSEEUG00000015437	SNRNP48	79	34.317	Erinaceus_europaeus
ENSPMEG00000018033	snrnp48	94	60.177	ENSELUG00000009766	snrnp48	73	64.751	Esox_lucius
ENSPMEG00000018033	snrnp48	80	43.344	ENSFCAG00000018853	SNRNP48	73	50.000	Felis_catus
ENSPMEG00000018033	snrnp48	68	54.583	ENSFALG00000007797	SNRNP48	72	56.332	Ficedula_albicollis
ENSPMEG00000018033	snrnp48	93	45.133	ENSFDAG00000009231	SNRNP48	73	50.996	Fukomys_damarensis
ENSPMEG00000018033	snrnp48	64	87.892	ENSFHEG00000014647	snrnp48	95	85.560	Fundulus_heteroclitus
ENSPMEG00000018033	snrnp48	90	61.846	ENSGMOG00000018599	-	83	69.925	Gadus_morhua
ENSPMEG00000018033	snrnp48	77	51.866	ENSGALG00000013005	SNRNP48	68	59.024	Gallus_gallus
ENSPMEG00000018033	snrnp48	95	95.706	ENSGAFG00000021639	snrnp48	95	95.706	Gambusia_affinis
ENSPMEG00000018033	snrnp48	73	76.800	ENSGACG00000017756	-	76	77.559	Gasterosteus_aculeatus
ENSPMEG00000018033	snrnp48	83	47.368	ENSGAGG00000000865	SNRNP48	69	53.774	Gopherus_agassizii
ENSPMEG00000018033	snrnp48	81	45.092	ENSGGOG00000013220	SNRNP48	73	51.793	Gorilla_gorilla
ENSPMEG00000018033	snrnp48	94	76.636	ENSHBUG00000017066	snrnp48	94	76.074	Haplochromis_burtoni
ENSPMEG00000018033	snrnp48	93	42.899	ENSHGLG00000015241	SNRNP48	95	43.293	Heterocephalus_glaber_female
ENSPMEG00000018033	snrnp48	93	42.899	ENSHGLG00100010027	SNRNP48	95	43.293	Heterocephalus_glaber_male
ENSPMEG00000018033	snrnp48	74	73.228	ENSHCOG00000014066	snrnp48	94	66.265	Hippocampus_comes
ENSPMEG00000018033	snrnp48	93	44.675	ENSSTOG00000014635	SNRNP48	95	44.207	Ictidomys_tridecemlineatus
ENSPMEG00000018033	snrnp48	79	48.561	ENSJJAG00000011495	Snrnp48	72	51.012	Jaculus_jaculus
ENSPMEG00000018033	snrnp48	95	78.593	ENSKMAG00000016514	snrnp48	95	78.593	Kryptolebias_marmoratus
ENSPMEG00000018033	snrnp48	81	74.101	ENSLBEG00000026249	snrnp48	95	72.783	Labrus_bergylta
ENSPMEG00000018033	snrnp48	91	51.343	ENSLACG00000003958	SNRNP48	80	53.846	Latimeria_chalumnae
ENSPMEG00000018033	snrnp48	85	59.450	ENSLOCG00000004187	snrnp48	81	60.219	Lepisosteus_oculatus
ENSPMEG00000018033	snrnp48	80	48.057	ENSLAFG00000011152	SNRNP48	73	51.190	Loxodonta_africana
ENSPMEG00000018033	snrnp48	81	44.785	ENSMFAG00000045216	SNRNP48	73	51.793	Macaca_fascicularis
ENSPMEG00000018033	snrnp48	81	44.785	ENSMMUG00000014785	SNRNP48	73	51.793	Macaca_mulatta
ENSPMEG00000018033	snrnp48	81	45.092	ENSMNEG00000042269	SNRNP48	73	52.191	Macaca_nemestrina
ENSPMEG00000018033	snrnp48	81	44.785	ENSMLEG00000034004	SNRNP48	73	51.793	Mandrillus_leucophaeus
ENSPMEG00000018033	snrnp48	95	68.196	ENSMAMG00000018673	snrnp48	83	72.783	Mastacembelus_armatus
ENSPMEG00000018033	snrnp48	81	47.368	ENSMGAG00000006037	SNRNP48	68	58.537	Meleagris_gallopavo
ENSPMEG00000018033	snrnp48	96	43.235	ENSMAUG00000011944	Snrnp48	85	47.222	Mesocricetus_auratus
ENSPMEG00000018033	snrnp48	80	48.763	ENSMICG00000012497	SNRNP48	73	50.397	Microcebus_murinus
ENSPMEG00000018033	snrnp48	93	45.317	ENSMOCG00000015555	Snrnp48	84	48.239	Microtus_ochrogaster
ENSPMEG00000018033	snrnp48	56	80.208	ENSMMOG00000003072	-	61	80.208	Mola_mola
ENSPMEG00000018033	snrnp48	83	47.297	ENSMODG00000009996	SNRNP48	77	47.552	Monodelphis_domestica
ENSPMEG00000018033	snrnp48	96	72.866	ENSMALG00000005725	snrnp48	95	76.147	Monopterus_albus
ENSPMEG00000018033	snrnp48	93	44.248	MGP_CAROLIEiJ_G0018441	Snrnp48	84	47.183	Mus_caroli
ENSPMEG00000018033	snrnp48	93	44.248	ENSMUSG00000021431	Snrnp48	75	49.412	Mus_musculus
ENSPMEG00000018033	snrnp48	93	44.543	MGP_PahariEiJ_G0019509	Snrnp48	75	49.804	Mus_pahari
ENSPMEG00000018033	snrnp48	93	43.363	MGP_SPRETEiJ_G0019321	Snrnp48	75	49.412	Mus_spretus
ENSPMEG00000018033	snrnp48	93	44.838	ENSNGAG00000004849	Snrnp48	82	49.462	Nannospalax_galili
ENSPMEG00000018033	snrnp48	94	76.636	ENSNBRG00000012127	snrnp48	94	76.074	Neolamprologus_brichardi
ENSPMEG00000018033	snrnp48	81	44.785	ENSNLEG00000011667	SNRNP48	73	51.793	Nomascus_leucogenys
ENSPMEG00000018033	snrnp48	86	45.016	ENSOPRG00000015471	SNRNP48	77	51.210	Ochotona_princeps
ENSPMEG00000018033	snrnp48	94	77.259	ENSONIG00000001520	snrnp48	94	76.687	Oreochromis_niloticus
ENSPMEG00000018033	snrnp48	52	38.308	ENSOANG00000019888	-	99	38.278	Ornithorhynchus_anatinus
ENSPMEG00000018033	snrnp48	79	47.464	ENSOCUG00000005168	SNRNP48	83	50.000	Oryctolagus_cuniculus
ENSPMEG00000018033	snrnp48	87	75.168	ENSORLG00000015654	snrnp48	94	73.926	Oryzias_latipes
ENSPMEG00000018033	snrnp48	87	73.490	ENSORLG00020015976	snrnp48	80	73.313	Oryzias_latipes_hni
ENSPMEG00000018033	snrnp48	87	73.154	ENSORLG00015022379	snrnp48	80	73.006	Oryzias_latipes_hsok
ENSPMEG00000018033	snrnp48	94	74.766	ENSOMEG00000022007	snrnp48	94	74.540	Oryzias_melastigma
ENSPMEG00000018033	snrnp48	76	49.286	ENSOGAG00000005275	SNRNP48	84	49.286	Otolemur_garnettii
ENSPMEG00000018033	snrnp48	82	45.763	ENSOARG00000017319	SNRNP48	75	52.036	Ovis_aries
ENSPMEG00000018033	snrnp48	81	44.785	ENSPPAG00000032873	SNRNP48	81	48.387	Pan_paniscus
ENSPMEG00000018033	snrnp48	81	43.558	ENSPPRG00000004283	SNRNP48	73	50.199	Panthera_pardus
ENSPMEG00000018033	snrnp48	69	44.840	ENSPTIG00000013502	SNRNP48	71	53.398	Panthera_tigris_altaica
ENSPMEG00000018033	snrnp48	81	44.785	ENSPTRG00000017703	SNRNP48	81	48.387	Pan_troglodytes
ENSPMEG00000018033	snrnp48	81	44.785	ENSPANG00000000771	SNRNP48	73	51.793	Papio_anubis
ENSPMEG00000018033	snrnp48	91	55.202	ENSPKIG00000013703	snrnp48	54	64.314	Paramormyrops_kingsleyae
ENSPMEG00000018033	snrnp48	77	48.029	ENSPSIG00000002213	SNRNP48	64	55.556	Pelodiscus_sinensis
ENSPMEG00000018033	snrnp48	76	66.415	ENSPMGG00000008120	snrnp48	94	66.415	Periophthalmus_magnuspinnatus
ENSPMEG00000018033	snrnp48	93	44.970	ENSPEMG00000008872	Snrnp48	75	50.781	Peromyscus_maniculatus_bairdii
ENSPMEG00000018033	snrnp48	100	99.415	ENSPFOG00000003578	snrnp48	100	99.415	Poecilia_formosa
ENSPMEG00000018033	snrnp48	69	98.729	ENSPLAG00000002290	snrnp48	96	84.321	Poecilia_latipinna
ENSPMEG00000018033	snrnp48	100	97.368	ENSPREG00000018541	snrnp48	100	97.368	Poecilia_reticulata
ENSPMEG00000018033	snrnp48	81	44.785	ENSPPYG00000016209	SNRNP48	73	51.793	Pongo_abelii
ENSPMEG00000018033	snrnp48	70	38.153	ENSPCAG00000011991	SNRNP48	97	38.697	Procavia_capensis
ENSPMEG00000018033	snrnp48	82	46.154	ENSPVAG00000002854	SNRNP48	75	48.627	Pteropus_vampyrus
ENSPMEG00000018033	snrnp48	92	76.582	ENSPNYG00000015399	snrnp48	89	77.338	Pundamilia_nyererei
ENSPMEG00000018033	snrnp48	93	44.970	ENSRNOG00000013756	Snrnp48	75	50.000	Rattus_norvegicus
ENSPMEG00000018033	snrnp48	80	48.582	ENSRBIG00000043856	SNRNP48	88	49.462	Rhinopithecus_bieti
ENSPMEG00000018033	snrnp48	81	44.785	ENSRROG00000043229	SNRNP48	73	51.793	Rhinopithecus_roxellana
ENSPMEG00000018033	snrnp48	81	45.399	ENSSBOG00000019486	SNRNP48	73	52.191	Saimiri_boliviensis_boliviensis
ENSPMEG00000018033	snrnp48	81	47.635	ENSSHAG00000014483	SNRNP48	80	48.410	Sarcophilus_harrisii
ENSPMEG00000018033	snrnp48	73	62.745	ENSSFOG00015006610	snrnp48	67	60.351	Scleropages_formosus
ENSPMEG00000018033	snrnp48	95	74.924	ENSSDUG00000014953	snrnp48	95	74.924	Seriola_dumerili
ENSPMEG00000018033	snrnp48	95	74.468	ENSSLDG00000005989	snrnp48	95	74.468	Seriola_lalandi_dorsalis
ENSPMEG00000018033	snrnp48	75	50.558	ENSSPUG00000006257	SNRNP48	60	53.991	Sphenodon_punctatus
ENSPMEG00000018033	snrnp48	96	76.758	ENSSPAG00000006454	snrnp48	95	77.301	Stegastes_partitus
ENSPMEG00000018033	snrnp48	79	48.763	ENSTGUG00000007575	SNRNP48	68	56.075	Taeniopygia_guttata
ENSPMEG00000018033	snrnp48	74	72.266	ENSTRUG00000007031	snrnp48	86	67.931	Takifugu_rubripes
ENSPMEG00000018033	snrnp48	98	65.774	ENSTNIG00000012977	-	82	69.597	Tetraodon_nigroviridis
ENSPMEG00000018033	snrnp48	73	48.828	ENSTBEG00000015620	SNRNP48	75	49.219	Tupaia_belangeri
ENSPMEG00000018033	snrnp48	85	43.865	ENSTTRG00000016715	SNRNP48	73	49.597	Tursiops_truncatus
ENSPMEG00000018033	snrnp48	92	44.073	ENSUAMG00000003690	SNRNP48	72	49.798	Ursus_americanus
ENSPMEG00000018033	snrnp48	59	53.659	ENSVPAG00000003557	SNRNP48	70	53.659	Vicugna_pacos
ENSPMEG00000018033	snrnp48	92	43.844	ENSVVUG00000004996	SNRNP48	72	49.597	Vulpes_vulpes
ENSPMEG00000018033	snrnp48	83	47.405	ENSXETG00000020447	snrnp48	77	49.434	Xenopus_tropicalis
ENSPMEG00000018033	snrnp48	95	87.423	ENSXCOG00000004478	snrnp48	95	87.423	Xiphophorus_couchianus
ENSPMEG00000018033	snrnp48	100	96.784	ENSXMAG00000013595	snrnp48	100	96.784	Xiphophorus_maculatus