EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMEG00000018237 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Plus strand
Length: 5055 bases
Position: chrKQ552088.1:201758-206812
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000015663	SM-ATX	PF14438.6	2.3e-07	1	1
ENSPMEP00000015663	LSM14	PF12701.7	2e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000033088	-	771	-	ENSPMEP00000015663	256 (aa)	-	-

Gene Model

Click here to download ENSPMEG00000018237's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000018237's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMEG00000018237	-	93	86.122	ENSPMEG00000015093	lsm14aa	52	88.085

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000018237	-	90	61.017	ENSG00000257103	LSM14A	93	95.789	Homo_sapiens
ENSPMEG00000018237	-	94	73.228	ENSAPOG00000000078	lsm14aa	56	75.197	Acanthochromis_polyacanthus
ENSPMEG00000018237	-	95	54.217	ENSAOCG00000001256	lsm14ab	54	55.645	Amphiprion_ocellaris
ENSPMEG00000018237	-	96	62.698	ENSAPEG00000012119	lsm14aa	93	94.792	Amphiprion_percula
ENSPMEG00000018237	-	95	54.217	ENSAPEG00000010936	lsm14ab	62	55.645	Amphiprion_percula
ENSPMEG00000018237	-	89	62.609	ENSANAG00000019299	-	93	95.789	Aotus_nancymaae
ENSPMEG00000018237	-	57	66.667	ENSANAG00000031175	-	94	76.842	Aotus_nancymaae
ENSPMEG00000018237	-	89	62.609	ENSCJAG00000010360	LSM14A	93	95.789	Callithrix_jacchus
ENSPMEG00000018237	-	89	50.612	ENSCCAG00000037290	-	87	81.053	Cebus_capucinus
ENSPMEG00000018237	-	99	54.613	ENSCCAG00000028536	-	95	92.632	Cebus_capucinus
ENSPMEG00000018237	-	99	41.111	ENSCCAG00000027019	-	54	43.882	Cebus_capucinus
ENSPMEG00000018237	-	97	50.936	ENSCCAG00000038098	-	94	86.316	Cebus_capucinus
ENSPMEG00000018237	-	93	47.755	ENSCLAG00000014326	-	52	50.909	Chinchilla_lanigera
ENSPMEG00000018237	-	89	59.350	ENSCSAG00000004663	LSM14A	58	60.338	Chlorocebus_sabaeus
ENSPMEG00000018237	-	89	56.911	ENSCANG00000032314	-	58	57.269	Colobus_angolensis_palliatus
ENSPMEG00000018237	-	74	70.647	ENSCSEG00000021457	lsm14aa	95	91.753	Cynoglossus_semilaevis
ENSPMEG00000018237	-	99	70.543	ENSCVAG00000019400	lsm14aa	50	70.930	Cyprinodon_variegatus
ENSPMEG00000018237	-	85	67.265	ENSDARG00000006600	lsm14aa	99	95.238	Danio_rerio
ENSPMEG00000018237	-	74	41.379	ENSDNOG00000038517	-	56	41.872	Dasypus_novemcinctus
ENSPMEG00000018237	-	57	66.207	ENSEBUG00000012576	LSM14A	70	66.207	Eptatretus_burgeri
ENSPMEG00000018237	-	99	77.907	ENSFHEG00000019482	lsm14aa	54	79.032	Fundulus_heteroclitus
ENSPMEG00000018237	-	95	56.705	ENSGALG00000004935	LSM14A	50	61.207	Gallus_gallus
ENSPMEG00000018237	-	97	80.377	ENSGAFG00000013383	lsm14aa	56	81.132	Gambusia_affinis
ENSPMEG00000018237	-	88	60.000	ENSGGOG00000001762	LSM14A	56	58.403	Gorilla_gorilla
ENSPMEG00000018237	-	94	56.154	ENSHGLG00000000764	-	58	58.577	Heterocephalus_glaber_female
ENSPMEG00000018237	-	82	53.448	ENSHGLG00100014983	-	51	53.448	Heterocephalus_glaber_male
ENSPMEG00000018237	-	96	69.478	ENSKMAG00000006797	lsm14aa	57	67.939	Kryptolebias_marmoratus
ENSPMEG00000018237	-	95	71.084	ENSLBEG00000010487	lsm14aa	88	95.098	Labrus_bergylta
ENSPMEG00000018237	-	89	62.609	ENSMFAG00000006057	-	56	60.338	Macaca_fascicularis
ENSPMEG00000018237	-	56	40.278	ENSMFAG00000002762	-	54	35.398	Macaca_fascicularis
ENSPMEG00000018237	-	89	62.609	ENSMMUG00000021614	LSM14A	54	60.338	Macaca_mulatta
ENSPMEG00000018237	-	85	37.500	ENSMNEG00000045504	-	59	37.500	Macaca_nemestrina
ENSPMEG00000018237	-	89	62.609	ENSMNEG00000039430	-	56	60.338	Macaca_nemestrina
ENSPMEG00000018237	-	95	75.000	ENSMAMG00000016088	lsm14aa	53	72.587	Mastacembelus_armatus
ENSPMEG00000018237	-	96	70.281	ENSMZEG00005020507	lsm14aa	52	68.952	Maylandia_zebra
ENSPMEG00000018237	-	89	53.252	ENSMICG00000034290	-	54	54.430	Microcebus_murinus
ENSPMEG00000018237	-	89	59.756	ENSMICG00000011598	-	55	61.603	Microcebus_murinus
ENSPMEG00000018237	-	95	73.494	ENSMMOG00000013209	lsm14aa	53	73.494	Mola_mola
ENSPMEG00000018237	-	95	73.469	ENSMALG00000014509	lsm14aa	50	73.820	Monopterus_albus
ENSPMEG00000018237	-	97	56.604	MGP_CAROLIEiJ_G0029574	Lsm14a	57	75.472	Mus_caroli
ENSPMEG00000018237	-	97	56.604	ENSMUSG00000066568	Lsm14a	57	75.472	Mus_musculus
ENSPMEG00000018237	-	97	56.604	MGP_SPRETEiJ_G0030673	Lsm14a	57	75.472	Mus_spretus
ENSPMEG00000018237	-	92	55.696	ENSMLUG00000022423	-	50	57.919	Myotis_lucifugus
ENSPMEG00000018237	-	92	55.274	ENSMLUG00000027841	-	50	57.466	Myotis_lucifugus
ENSPMEG00000018237	-	100	50.709	ENSNLEG00000030371	-	56	56.540	Nomascus_leucogenys
ENSPMEG00000018237	-	100	49.645	ENSNLEG00000034705	-	86	82.243	Nomascus_leucogenys
ENSPMEG00000018237	-	90	61.017	ENSNLEG00000011713	-	56	59.916	Nomascus_leucogenys
ENSPMEG00000018237	-	85	71.239	ENSONIG00000018243	lsm14aa	52	68.421	Oreochromis_niloticus
ENSPMEG00000018237	-	96	47.727	ENSOGAG00000024066	-	53	50.633	Otolemur_garnettii
ENSPMEG00000018237	-	90	61.017	ENSPPAG00000042618	LSM14A	56	59.916	Pan_paniscus
ENSPMEG00000018237	-	88	48.319	ENSPTRG00000050627	-	54	49.115	Pan_troglodytes
ENSPMEG00000018237	-	88	48.319	ENSPTRG00000050794	-	54	49.115	Pan_troglodytes
ENSPMEG00000018237	-	90	57.937	ENSPTRG00000040949	-	100	91.837	Pan_troglodytes
ENSPMEG00000018237	-	90	61.017	ENSPTRG00000010813	LSM14A	56	59.916	Pan_troglodytes
ENSPMEG00000018237	-	100	55.311	ENSPANG00000004462	-	58	59.916	Papio_anubis
ENSPMEG00000018237	-	98	57.143	ENSPKIG00000004788	LSM14A	58	63.519	Paramormyrops_kingsleyae
ENSPMEG00000018237	-	90	64.807	ENSPMGG00000000220	lsm14aa	89	94.624	Periophthalmus_magnuspinnatus
ENSPMEG00000018237	-	99	78.261	ENSPFOG00000014346	-	68	78.623	Poecilia_formosa
ENSPMEG00000018237	-	93	86.122	ENSPFOG00000000534	lsm14aa	53	86.531	Poecilia_formosa
ENSPMEG00000018237	-	64	99.394	ENSPLAG00000010452	-	70	99.394	Poecilia_latipinna
ENSPMEG00000018237	-	95	88.417	ENSPLAG00000004359	lsm14aa	56	88.803	Poecilia_latipinna
ENSPMEG00000018237	-	98	84.733	ENSPREG00000016833	lsm14aa	54	82.955	Poecilia_reticulata
ENSPMEG00000018237	-	85	52.489	ENSPCOG00000016240	-	89	96.429	Propithecus_coquereli
ENSPMEG00000018237	-	72	65.000	ENSPNYG00000010236	lsm14ab	56	62.054	Pundamilia_nyererei
ENSPMEG00000018237	-	89	62.609	ENSRROG00000037711	-	56	60.338	Rhinopithecus_roxellana
ENSPMEG00000018237	-	95	40.323	ENSRROG00000034183	-	51	41.518	Rhinopithecus_roxellana
ENSPMEG00000018237	-	74	46.602	ENSSBOG00000022336	-	54	46.602	Saimiri_boliviensis_boliviensis
ENSPMEG00000018237	-	96	43.750	ENSSBOG00000023312	-	90	80.435	Saimiri_boliviensis_boliviensis
ENSPMEG00000018237	-	89	59.184	ENSSBOG00000020141	-	93	94.737	Saimiri_boliviensis_boliviensis
ENSPMEG00000018237	-	88	53.086	ENSSBOG00000021178	-	64	85.870	Saimiri_boliviensis_boliviensis
ENSPMEG00000018237	-	99	56.929	ENSSFOG00015019348	lsm14ab	52	56.554	Scleropages_formosus
ENSPMEG00000018237	-	95	75.000	ENSSDUG00000000495	lsm14aa	56	73.541	Seriola_dumerili
ENSPMEG00000018237	-	92	73.387	ENSSLDG00000014548	lsm14aa	53	75.000	Seriola_lalandi_dorsalis
ENSPMEG00000018237	-	95	71.660	ENSTRUG00000004046	lsm14aa	56	69.202	Takifugu_rubripes
ENSPMEG00000018237	-	57	71.429	ENSTNIG00000010522	lsm14ab	50	58.824	Tetraodon_nigroviridis
ENSPMEG00000018237	-	89	58.943	ENSUAMG00000017314	LSM14A	91	89.423	Ursus_americanus
ENSPMEG00000018237	-	94	84.615	ENSXCOG00000016313	lsm14aa	54	84.959	Xiphophorus_couchianus
ENSPMEG00000018237	-	98	84.980	ENSXMAG00000007117	lsm14aa	58	84.436	Xiphophorus_maculatus