EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMEG00000018478 (Gene tree)
Gene ID: 106910085
Gene Symbol: xrcc6
Alias: -
Full Name: X-ray repair cross complementing 6
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Minus strand
Length: 9909 bases
Position: chrLMXC01030831.1:33697-43605
Accession: 106910085
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000015893	SAP	PF02037.27	6e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000024298	-	5645	XM_014976651	ENSPMEP00000015893	610 (aa)	XP_014832137	UPI00072E2673

Gene Model

Click here to download ENSPMEG00000018478's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000018478's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000018478	xrcc6	99	55.556	ENSG00000196419	XRCC6	99	55.719	Homo_sapiens
ENSPMEG00000018478	xrcc6	99	84.729	ENSAPOG00000012704	xrcc6	100	84.729	Acanthochromis_polyacanthus
ENSPMEG00000018478	xrcc6	100	85.082	ENSACIG00000021277	xrcc6	100	85.082	Amphilophus_citrinellus
ENSPMEG00000018478	xrcc6	100	84.918	ENSAOCG00000021344	xrcc6	100	84.918	Amphiprion_ocellaris
ENSPMEG00000018478	xrcc6	100	85.082	ENSAPEG00000020712	xrcc6	100	85.082	Amphiprion_percula
ENSPMEG00000018478	xrcc6	100	84.918	ENSATEG00000007119	xrcc6	100	84.918	Anabas_testudineus
ENSPMEG00000018478	xrcc6	90	60.584	ENSAPLG00000004469	XRCC6	98	60.695	Anas_platyrhynchos
ENSPMEG00000018478	xrcc6	99	48.529	ENSANAG00000035230	-	99	48.366	Aotus_nancymaae
ENSPMEG00000018478	xrcc6	99	48.933	ENSANAG00000020017	-	99	48.933	Aotus_nancymaae
ENSPMEG00000018478	xrcc6	99	46.819	ENSANAG00000023445	-	99	46.656	Aotus_nancymaae
ENSPMEG00000018478	xrcc6	99	55.229	ENSANAG00000018684	XRCC6	99	55.229	Aotus_nancymaae
ENSPMEG00000018478	xrcc6	100	85.738	ENSACLG00000018608	xrcc6	100	85.738	Astatotilapia_calliptera
ENSPMEG00000018478	xrcc6	99	76.480	ENSAMXG00000007545	xrcc6	99	76.480	Astyanax_mexicanus
ENSPMEG00000018478	xrcc6	99	55.229	ENSCJAG00000045512	XRCC6	99	55.229	Callithrix_jacchus
ENSPMEG00000018478	xrcc6	99	55.882	ENSTSYG00000011348	XRCC6	99	55.882	Carlito_syrichta
ENSPMEG00000018478	xrcc6	99	46.470	ENSCCAG00000037663	-	97	46.470	Cebus_capucinus
ENSPMEG00000018478	xrcc6	99	52.288	ENSCCAG00000030041	-	95	51.797	Cebus_capucinus
ENSPMEG00000018478	xrcc6	93	53.175	ENSCCAG00000030468	-	99	53.175	Cebus_capucinus
ENSPMEG00000018478	xrcc6	99	44.975	ENSCCAG00000035711	-	99	44.811	Cebus_capucinus
ENSPMEG00000018478	xrcc6	99	55.719	ENSCATG00000042366	XRCC6	99	55.882	Cercocebus_atys
ENSPMEG00000018478	xrcc6	99	56.301	ENSCLAG00000016669	XRCC6	99	56.301	Chinchilla_lanigera
ENSPMEG00000018478	xrcc6	99	55.719	ENSCSAG00000005784	XRCC6	99	55.882	Chlorocebus_sabaeus
ENSPMEG00000018478	xrcc6	99	59.934	ENSCPBG00000020535	XRCC6	99	59.934	Chrysemys_picta_bellii
ENSPMEG00000018478	xrcc6	97	34.950	ENSCING00000000633	-	94	34.888	Ciona_intestinalis
ENSPMEG00000018478	xrcc6	99	55.719	ENSCANG00000031032	XRCC6	99	55.882	Colobus_angolensis_palliatus
ENSPMEG00000018478	xrcc6	99	52.310	ENSCGRG00001019029	Xrcc6	99	52.310	Cricetulus_griseus_chok1gshd
ENSPMEG00000018478	xrcc6	99	56.721	ENSCGRG00000001528	Xrcc6	99	57.096	Cricetulus_griseus_crigri
ENSPMEG00000018478	xrcc6	100	79.180	ENSCSEG00000020434	xrcc6	100	79.180	Cynoglossus_semilaevis
ENSPMEG00000018478	xrcc6	100	89.836	ENSCVAG00000002189	xrcc6	100	89.836	Cyprinodon_variegatus
ENSPMEG00000018478	xrcc6	99	74.220	ENSDARG00000071551	xrcc6	99	74.877	Danio_rerio
ENSPMEG00000018478	xrcc6	78	53.285	ENSETEG00000015333	-	77	53.285	Echinops_telfairi
ENSPMEG00000018478	xrcc6	99	54.992	ENSEASG00005001514	XRCC6	99	55.646	Equus_asinus_asinus
ENSPMEG00000018478	xrcc6	99	55.155	ENSECAG00000017563	XRCC6	99	55.398	Equus_caballus
ENSPMEG00000018478	xrcc6	100	74.262	ENSELUG00000020301	xrcc6	100	74.262	Esox_lucius
ENSPMEG00000018478	xrcc6	99	58.401	ENSFALG00000011908	XRCC6	96	58.564	Ficedula_albicollis
ENSPMEG00000018478	xrcc6	100	92.131	ENSFHEG00000016833	xrcc6	100	92.131	Fundulus_heteroclitus
ENSPMEG00000018478	xrcc6	99	67.101	ENSGMOG00000013524	xrcc6	100	67.101	Gadus_morhua
ENSPMEG00000018478	xrcc6	99	59.446	ENSGALG00000011932	XRCC6	99	59.609	Gallus_gallus
ENSPMEG00000018478	xrcc6	100	93.770	ENSGAFG00000008130	xrcc6	100	93.770	Gambusia_affinis
ENSPMEG00000018478	xrcc6	99	82.085	ENSGACG00000004868	xrcc6	99	82.085	Gasterosteus_aculeatus
ENSPMEG00000018478	xrcc6	99	59.770	ENSGAGG00000017518	XRCC6	99	59.770	Gopherus_agassizii
ENSPMEG00000018478	xrcc6	99	55.556	ENSGGOG00000015885	XRCC6	99	55.719	Gorilla_gorilla
ENSPMEG00000018478	xrcc6	93	86.042	ENSHBUG00000023281	xrcc6	100	86.042	Haplochromis_burtoni
ENSPMEG00000018478	xrcc6	99	56.230	ENSHGLG00000018078	XRCC6	99	55.902	Heterocephalus_glaber_female
ENSPMEG00000018478	xrcc6	99	56.230	ENSHGLG00100011264	XRCC6	99	55.902	Heterocephalus_glaber_male
ENSPMEG00000018478	xrcc6	100	77.869	ENSHCOG00000009821	xrcc6	100	77.869	Hippocampus_comes
ENSPMEG00000018478	xrcc6	99	75.658	ENSIPUG00000000767	xrcc6	99	74.836	Ictalurus_punctatus
ENSPMEG00000018478	xrcc6	99	55.810	ENSSTOG00000009490	XRCC6	99	56.137	Ictidomys_tridecemlineatus
ENSPMEG00000018478	xrcc6	99	52.796	ENSJJAG00000017136	Xrcc6	99	53.542	Jaculus_jaculus
ENSPMEG00000018478	xrcc6	99	88.342	ENSKMAG00000002141	xrcc6	99	88.342	Kryptolebias_marmoratus
ENSPMEG00000018478	xrcc6	99	84.375	ENSLBEG00000002691	xrcc6	99	84.375	Labrus_bergylta
ENSPMEG00000018478	xrcc6	87	63.366	ENSLOCG00000011533	xrcc6	99	63.366	Lepisosteus_oculatus
ENSPMEG00000018478	xrcc6	99	55.719	ENSMFAG00000003352	XRCC6	99	55.882	Macaca_fascicularis
ENSPMEG00000018478	xrcc6	99	55.719	ENSMMUG00000001856	XRCC6	99	55.882	Macaca_mulatta
ENSPMEG00000018478	xrcc6	99	55.719	ENSMNEG00000035076	XRCC6	99	55.882	Macaca_nemestrina
ENSPMEG00000018478	xrcc6	99	55.719	ENSMLEG00000019869	XRCC6	99	55.882	Mandrillus_leucophaeus
ENSPMEG00000018478	xrcc6	96	82.964	ENSMAMG00000003405	xrcc6	97	82.964	Mastacembelus_armatus
ENSPMEG00000018478	xrcc6	100	83.470	ENSMAMG00000003368	xrcc6	100	83.470	Mastacembelus_armatus
ENSPMEG00000018478	xrcc6	100	85.574	ENSMZEG00005028080	xrcc6	100	85.574	Maylandia_zebra
ENSPMEG00000018478	xrcc6	99	58.469	ENSMGAG00000012146	XRCC6	99	58.469	Meleagris_gallopavo
ENSPMEG00000018478	xrcc6	99	57.166	ENSMAUG00000017340	Xrcc6	99	57.166	Mesocricetus_auratus
ENSPMEG00000018478	xrcc6	99	56.837	ENSMOCG00000015717	Xrcc6	99	57.002	Microtus_ochrogaster
ENSPMEG00000018478	xrcc6	100	81.311	ENSMMOG00000003536	xrcc6	99	81.311	Mola_mola
ENSPMEG00000018478	xrcc6	100	84.426	ENSMALG00000013912	xrcc6	95	84.426	Monopterus_albus
ENSPMEG00000018478	xrcc6	99	53.443	MGP_CAROLIEiJ_G0020067	Xrcc6	99	53.630	Mus_caroli
ENSPMEG00000018478	xrcc6	99	57.705	ENSMUSG00000022471	Xrcc6	99	59.316	Mus_musculus
ENSPMEG00000018478	xrcc6	99	57.541	MGP_PahariEiJ_G0020069	Xrcc6	99	57.541	Mus_pahari
ENSPMEG00000018478	xrcc6	96	58.219	MGP_SPRETEiJ_G0020967	Xrcc6	99	58.219	Mus_spretus
ENSPMEG00000018478	xrcc6	99	56.837	ENSNGAG00000013750	Xrcc6	99	56.837	Nannospalax_galili
ENSPMEG00000018478	xrcc6	100	85.738	ENSNBRG00000004125	xrcc6	100	85.738	Neolamprologus_brichardi
ENSPMEG00000018478	xrcc6	95	58.348	ENSOPRG00000002386	XRCC6	99	58.348	Ochotona_princeps
ENSPMEG00000018478	xrcc6	99	56.465	ENSODEG00000015847	XRCC6	99	56.137	Octodon_degus
ENSPMEG00000018478	xrcc6	100	85.246	ENSONIG00000019715	xrcc6	100	85.246	Oreochromis_niloticus
ENSPMEG00000018478	xrcc6	68	59.856	ENSOANG00000011328	XRCC6	99	59.856	Ornithorhynchus_anatinus
ENSPMEG00000018478	xrcc6	99	56.908	ENSOCUG00000006948	XRCC6	99	57.237	Oryctolagus_cuniculus
ENSPMEG00000018478	xrcc6	100	84.288	ENSORLG00020007820	xrcc6	100	84.288	Oryzias_latipes_hni
ENSPMEG00000018478	xrcc6	100	83.961	ENSORLG00015006406	xrcc6	100	83.961	Oryzias_latipes_hsok
ENSPMEG00000018478	xrcc6	100	83.797	ENSOMEG00000008998	xrcc6	100	83.797	Oryzias_melastigma
ENSPMEG00000018478	xrcc6	99	55.646	ENSOGAG00000008821	XRCC6	99	55.810	Otolemur_garnettii
ENSPMEG00000018478	xrcc6	92	55.676	ENSPPAG00000037167	XRCC6	99	55.676	Pan_paniscus
ENSPMEG00000018478	xrcc6	99	55.556	ENSPTRG00000022548	XRCC6	99	56.581	Pan_troglodytes
ENSPMEG00000018478	xrcc6	99	55.556	ENSPTRG00000045824	XRCC6	99	56.581	Pan_troglodytes
ENSPMEG00000018478	xrcc6	99	55.882	ENSPANG00000001252	XRCC6	99	58.190	Papio_anubis
ENSPMEG00000018478	xrcc6	99	71.382	ENSPKIG00000003974	xrcc6	99	71.382	Paramormyrops_kingsleyae
ENSPMEG00000018478	xrcc6	99	79.236	ENSPMGG00000014220	xrcc6	100	79.236	Periophthalmus_magnuspinnatus
ENSPMEG00000018478	xrcc6	99	56.343	ENSPEMG00000023446	Xrcc6	99	56.436	Peromyscus_maniculatus_bairdii
ENSPMEG00000018478	xrcc6	99	57.119	ENSPCIG00000026409	XRCC6	99	57.119	Phascolarctos_cinereus
ENSPMEG00000018478	xrcc6	100	99.344	ENSPFOG00000017173	xrcc6	100	99.344	Poecilia_formosa
ENSPMEG00000018478	xrcc6	100	98.689	ENSPLAG00000000562	xrcc6	100	98.689	Poecilia_latipinna
ENSPMEG00000018478	xrcc6	100	96.405	ENSPREG00000020957	xrcc6	93	96.405	Poecilia_reticulata
ENSPMEG00000018478	xrcc6	99	49.183	ENSPPYG00000011876	XRCC6	99	49.346	Pongo_abelii
ENSPMEG00000018478	xrcc6	99	55.574	ENSPVAG00000001168	XRCC6	99	55.574	Pteropus_vampyrus
ENSPMEG00000018478	xrcc6	100	85.410	ENSPNYG00000003815	xrcc6	100	81.279	Pundamilia_nyererei
ENSPMEG00000018478	xrcc6	99	56.885	ENSRNOG00000006392	Xrcc6	99	57.049	Rattus_norvegicus
ENSPMEG00000018478	xrcc6	99	51.471	ENSRBIG00000039794	XRCC6	99	52.641	Rhinopithecus_bieti
ENSPMEG00000018478	xrcc6	99	55.719	ENSRROG00000030297	XRCC6	99	55.882	Rhinopithecus_roxellana
ENSPMEG00000018478	xrcc6	67	50.367	ENSSBOG00000024724	-	99	50.367	Saimiri_boliviensis_boliviensis
ENSPMEG00000018478	xrcc6	99	57.026	ENSSHAG00000010790	XRCC6	99	57.026	Sarcophilus_harrisii
ENSPMEG00000018478	xrcc6	99	73.849	ENSSFOG00015014409	xrcc6	99	73.849	Scleropages_formosus
ENSPMEG00000018478	xrcc6	100	85.902	ENSSMAG00000006496	xrcc6	100	85.902	Scophthalmus_maximus
ENSPMEG00000018478	xrcc6	100	85.738	ENSSDUG00000007542	xrcc6	100	85.738	Seriola_dumerili
ENSPMEG00000018478	xrcc6	100	85.574	ENSSLDG00000009974	xrcc6	100	85.574	Seriola_lalandi_dorsalis
ENSPMEG00000018478	xrcc6	99	58.497	ENSSPUG00000012086	XRCC6	99	58.660	Sphenodon_punctatus
ENSPMEG00000018478	xrcc6	100	86.230	ENSSPAG00000015199	xrcc6	100	86.230	Stegastes_partitus
ENSPMEG00000018478	xrcc6	95	60.274	ENSTGUG00000009852	-	95	60.274	Taeniopygia_guttata
ENSPMEG00000018478	xrcc6	99	76.847	ENSTRUG00000017070	xrcc6	99	77.504	Takifugu_rubripes
ENSPMEG00000018478	xrcc6	96	77.327	ENSTNIG00000012947	xrcc6	99	77.327	Tetraodon_nigroviridis
ENSPMEG00000018478	xrcc6	96	52.740	ENSTBEG00000011736	XRCC6	99	52.740	Tupaia_belangeri
ENSPMEG00000018478	xrcc6	99	46.809	ENSTTRG00000006749	XRCC6	99	47.627	Tursiops_truncatus
ENSPMEG00000018478	xrcc6	100	96.066	ENSXMAG00000009691	xrcc6	100	96.066	Xiphophorus_maculatus