EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMEG00000018537 (Gene tree)
Gene ID: 106929830
Gene Symbol: si:ch211-117n7.8
Alias: -
Full Name: S1 RNA binding domain 1
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Plus strand
Length: 48922 bases
Position: chrKQ552155.1:79969-128890
Accession: 106929830
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000031408	S1	PF00575.23	1.1e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000024370	-	3142	XM_015006995	ENSPMEP00000031408	1002 (aa)	XP_014862481	UPI00072DDC30
ENSPMET00000024378	-	5108	-	ENSPMEP00000031412	944 (aa)	-	-

Gene Model

Click here to download ENSPMEG00000018537's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000018537's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000018537	si:ch211-117n7.8	97	51.665	ENSG00000068784	SRBD1	98	51.341	Homo_sapiens
ENSPMEG00000018537	si:ch211-117n7.8	100	79.293	ENSAPOG00000005103	si:ch211-117n7.8	100	79.293	Acanthochromis_polyacanthus
ENSPMEG00000018537	si:ch211-117n7.8	93	53.942	ENSAMEG00000005993	SRBD1	98	52.668	Ailuropoda_melanoleuca
ENSPMEG00000018537	si:ch211-117n7.8	97	79.717	ENSACIG00000009875	si:ch211-117n7.8	100	79.637	Amphilophus_citrinellus
ENSPMEG00000018537	si:ch211-117n7.8	100	78.487	ENSAOCG00000024718	si:ch211-117n7.8	100	78.487	Amphiprion_ocellaris
ENSPMEG00000018537	si:ch211-117n7.8	97	79.328	ENSAPEG00000002645	si:ch211-117n7.8	99	79.328	Amphiprion_percula
ENSPMEG00000018537	si:ch211-117n7.8	100	77.887	ENSATEG00000010844	si:ch211-117n7.8	100	77.887	Anabas_testudineus
ENSPMEG00000018537	si:ch211-117n7.8	92	55.509	ENSAPLG00000006313	SRBD1	100	53.378	Anas_platyrhynchos
ENSPMEG00000018537	si:ch211-117n7.8	97	51.766	ENSANAG00000025573	SRBD1	98	51.440	Aotus_nancymaae
ENSPMEG00000018537	si:ch211-117n7.8	100	79.610	ENSACLG00000024219	si:ch211-117n7.8	100	79.610	Astatotilapia_calliptera
ENSPMEG00000018537	si:ch211-117n7.8	100	62.273	ENSAMXG00000004294	SRBD1	100	64.557	Astyanax_mexicanus
ENSPMEG00000018537	si:ch211-117n7.8	93	52.784	ENSBTAG00000007508	SRBD1	97	50.050	Bos_taurus
ENSPMEG00000018537	si:ch211-117n7.8	83	57.193	ENSCJAG00000000727	SRBD1	98	50.896	Callithrix_jacchus
ENSPMEG00000018537	si:ch211-117n7.8	93	53.862	ENSCAFG00000002554	SRBD1	96	53.862	Canis_familiaris
ENSPMEG00000018537	si:ch211-117n7.8	93	51.503	ENSCAFG00020026284	SRBD1	99	57.864	Canis_lupus_dingo
ENSPMEG00000018537	si:ch211-117n7.8	93	52.887	ENSCHIG00000016535	SRBD1	97	51.375	Capra_hircus
ENSPMEG00000018537	si:ch211-117n7.8	94	53.885	ENSTSYG00000012797	SRBD1	99	51.873	Carlito_syrichta
ENSPMEG00000018537	si:ch211-117n7.8	93	54.000	ENSCPOG00000004773	SRBD1	96	54.000	Cavia_porcellus
ENSPMEG00000018537	si:ch211-117n7.8	97	51.463	ENSCCAG00000025589	SRBD1	98	51.142	Cebus_capucinus
ENSPMEG00000018537	si:ch211-117n7.8	97	52.073	ENSCATG00000039530	SRBD1	98	51.741	Cercocebus_atys
ENSPMEG00000018537	si:ch211-117n7.8	97	53.043	ENSCLAG00000008623	SRBD1	99	53.043	Chinchilla_lanigera
ENSPMEG00000018537	si:ch211-117n7.8	97	51.919	ENSCSAG00000013350	SRBD1	98	51.590	Chlorocebus_sabaeus
ENSPMEG00000018537	si:ch211-117n7.8	80	79.070	ENSCHOG00000003805	SRBD1	84	79.070	Choloepus_hoffmanni
ENSPMEG00000018537	si:ch211-117n7.8	94	53.894	ENSCPBG00000005677	SRBD1	100	52.724	Chrysemys_picta_bellii
ENSPMEG00000018537	si:ch211-117n7.8	78	40.449	ENSCING00000005950	-	99	40.449	Ciona_intestinalis
ENSPMEG00000018537	si:ch211-117n7.8	78	42.785	ENSCSAVG00000000861	-	99	42.785	Ciona_savignyi
ENSPMEG00000018537	si:ch211-117n7.8	97	51.766	ENSCANG00000016307	SRBD1	98	51.341	Colobus_angolensis_palliatus
ENSPMEG00000018537	si:ch211-117n7.8	99	51.381	ENSCGRG00001000513	Srbd1	99	51.381	Cricetulus_griseus_chok1gshd
ENSPMEG00000018537	si:ch211-117n7.8	99	51.381	ENSCGRG00000002283	Srbd1	99	51.381	Cricetulus_griseus_crigri
ENSPMEG00000018537	si:ch211-117n7.8	100	71.782	ENSCSEG00000000856	si:ch211-117n7.8	100	71.881	Cynoglossus_semilaevis
ENSPMEG00000018537	si:ch211-117n7.8	98	81.735	ENSCVAG00000020212	si:ch211-117n7.8	99	81.735	Cyprinodon_variegatus
ENSPMEG00000018537	si:ch211-117n7.8	93	52.205	ENSDNOG00000018686	SRBD1	96	52.205	Dasypus_novemcinctus
ENSPMEG00000018537	si:ch211-117n7.8	99	50.240	ENSDORG00000010468	Srbd1	96	53.742	Dipodomys_ordii
ENSPMEG00000018537	si:ch211-117n7.8	78	36.352	FBgn0051156	CG31156	79	36.478	Drosophila_melanogaster
ENSPMEG00000018537	si:ch211-117n7.8	73	58.394	ENSETEG00000000739	SRBD1	77	57.847	Echinops_telfairi
ENSPMEG00000018537	si:ch211-117n7.8	72	48.485	ENSEBUG00000008902	si:ch211-117n7.8	95	48.485	Eptatretus_burgeri
ENSPMEG00000018537	si:ch211-117n7.8	93	51.440	ENSEASG00005003132	SRBD1	98	56.654	Equus_asinus_asinus
ENSPMEG00000018537	si:ch211-117n7.8	93	53.601	ENSECAG00000013865	SRBD1	97	52.400	Equus_caballus
ENSPMEG00000018537	si:ch211-117n7.8	100	63.790	ENSELUG00000012592	si:ch211-117n7.8	100	64.857	Esox_lucius
ENSPMEG00000018537	si:ch211-117n7.8	93	53.472	ENSFCAG00000005101	SRBD1	98	51.816	Felis_catus
ENSPMEG00000018537	si:ch211-117n7.8	84	57.870	ENSFALG00000012966	SRBD1	97	52.642	Ficedula_albicollis
ENSPMEG00000018537	si:ch211-117n7.8	93	54.497	ENSFDAG00000016670	SRBD1	96	54.497	Fukomys_damarensis
ENSPMEG00000018537	si:ch211-117n7.8	100	85.392	ENSFHEG00000019480	si:ch211-117n7.8	100	85.392	Fundulus_heteroclitus
ENSPMEG00000018537	si:ch211-117n7.8	50	72.104	ENSGMOG00000018010	-	100	72.104	Gadus_morhua
ENSPMEG00000018537	si:ch211-117n7.8	84	59.328	ENSGALG00000009990	SRBD1	98	54.014	Gallus_gallus
ENSPMEG00000018537	si:ch211-117n7.8	100	94.711	ENSGAFG00000019664	si:ch211-117n7.8	100	94.810	Gambusia_affinis
ENSPMEG00000018537	si:ch211-117n7.8	62	82.243	ENSGACG00000010794	si:ch211-117n7.8	100	82.243	Gasterosteus_aculeatus
ENSPMEG00000018537	si:ch211-117n7.8	83	59.011	ENSGAGG00000006166	SRBD1	99	59.011	Gopherus_agassizii
ENSPMEG00000018537	si:ch211-117n7.8	97	51.915	ENSGGOG00000005910	SRBD1	99	51.915	Gorilla_gorilla
ENSPMEG00000018537	si:ch211-117n7.8	97	67.480	ENSHBUG00000013207	si:ch211-117n7.8	100	67.683	Haplochromis_burtoni
ENSPMEG00000018537	si:ch211-117n7.8	98	52.096	ENSHGLG00000018153	-	98	52.096	Heterocephalus_glaber_female
ENSPMEG00000018537	si:ch211-117n7.8	98	52.096	ENSHGLG00100015183	-	98	52.096	Heterocephalus_glaber_male
ENSPMEG00000018537	si:ch211-117n7.8	100	64.561	ENSIPUG00000009661	srbd1	100	64.793	Ictalurus_punctatus
ENSPMEG00000018537	si:ch211-117n7.8	98	52.642	ENSSTOG00000005898	SRBD1	98	52.642	Ictidomys_tridecemlineatus
ENSPMEG00000018537	si:ch211-117n7.8	98	50.148	ENSJJAG00000022244	Srbd1	98	50.148	Jaculus_jaculus
ENSPMEG00000018537	si:ch211-117n7.8	99	82.242	ENSKMAG00000003473	si:ch211-117n7.8	100	82.242	Kryptolebias_marmoratus
ENSPMEG00000018537	si:ch211-117n7.8	100	77.593	ENSLBEG00000027518	si:ch211-117n7.8	100	77.593	Labrus_bergylta
ENSPMEG00000018537	si:ch211-117n7.8	83	58.539	ENSLACG00000009790	SRBD1	98	58.539	Latimeria_chalumnae
ENSPMEG00000018537	si:ch211-117n7.8	92	64.339	ENSLOCG00000016360	si:ch211-117n7.8	99	61.328	Lepisosteus_oculatus
ENSPMEG00000018537	si:ch211-117n7.8	97	51.818	ENSMFAG00000042026	SRBD1	98	51.491	Macaca_fascicularis
ENSPMEG00000018537	si:ch211-117n7.8	83	57.193	ENSMMUG00000003490	SRBD1	98	51.389	Macaca_mulatta
ENSPMEG00000018537	si:ch211-117n7.8	97	50.606	ENSMNEG00000034701	SRBD1	98	50.298	Macaca_nemestrina
ENSPMEG00000018537	si:ch211-117n7.8	97	52.270	ENSMLEG00000000745	SRBD1	98	51.936	Mandrillus_leucophaeus
ENSPMEG00000018537	si:ch211-117n7.8	100	75.764	ENSMAMG00000021921	si:ch211-117n7.8	100	77.635	Mastacembelus_armatus
ENSPMEG00000018537	si:ch211-117n7.8	100	79.512	ENSMZEG00005027369	si:ch211-117n7.8	100	79.707	Maylandia_zebra
ENSPMEG00000018537	si:ch211-117n7.8	79	56.250	ENSMGAG00000010273	SRBD1	100	56.250	Meleagris_gallopavo
ENSPMEG00000018537	si:ch211-117n7.8	77	56.720	ENSMAUG00000013916	Srbd1	95	56.720	Mesocricetus_auratus
ENSPMEG00000018537	si:ch211-117n7.8	97	52.104	ENSMICG00000007835	SRBD1	99	51.210	Microcebus_murinus
ENSPMEG00000018537	si:ch211-117n7.8	99	50.888	ENSMOCG00000018716	Srbd1	99	50.888	Microtus_ochrogaster
ENSPMEG00000018537	si:ch211-117n7.8	97	75.256	ENSMMOG00000007507	si:ch211-117n7.8	100	75.256	Mola_mola
ENSPMEG00000018537	si:ch211-117n7.8	100	76.765	ENSMALG00000001562	si:ch211-117n7.8	100	76.863	Monopterus_albus
ENSPMEG00000018537	si:ch211-117n7.8	83	57.227	MGP_CAROLIEiJ_G0021934	Srbd1	99	58.632	Mus_caroli
ENSPMEG00000018537	si:ch211-117n7.8	83	57.227	ENSMUSG00000024135	Srbd1	99	55.914	Mus_musculus
ENSPMEG00000018537	si:ch211-117n7.8	85	56.547	MGP_PahariEiJ_G0020924	Srbd1	86	56.547	Mus_pahari
ENSPMEG00000018537	si:ch211-117n7.8	83	57.227	MGP_SPRETEiJ_G0022850	Srbd1	84	57.227	Mus_spretus
ENSPMEG00000018537	si:ch211-117n7.8	93	53.505	ENSMLUG00000007039	SRBD1	98	51.663	Myotis_lucifugus
ENSPMEG00000018537	si:ch211-117n7.8	84	55.619	ENSNGAG00000011893	Srbd1	85	55.619	Nannospalax_galili
ENSPMEG00000018537	si:ch211-117n7.8	98	76.660	ENSNBRG00000012873	si:ch211-117n7.8	100	76.861	Neolamprologus_brichardi
ENSPMEG00000018537	si:ch211-117n7.8	83	56.722	ENSNLEG00000016877	SRBD1	98	50.844	Nomascus_leucogenys
ENSPMEG00000018537	si:ch211-117n7.8	92	53.609	ENSODEG00000012095	SRBD1	96	53.609	Octodon_degus
ENSPMEG00000018537	si:ch211-117n7.8	100	79.707	ENSONIG00000000945	si:ch211-117n7.8	100	84.588	Oreochromis_niloticus
ENSPMEG00000018537	si:ch211-117n7.8	93	53.423	ENSOCUG00000015385	SRBD1	95	53.734	Oryctolagus_cuniculus
ENSPMEG00000018537	si:ch211-117n7.8	100	73.288	ENSORLG00000004427	si:ch211-117n7.8	100	73.288	Oryzias_latipes
ENSPMEG00000018537	si:ch211-117n7.8	100	76.833	ENSORLG00020012792	si:ch211-117n7.8	100	76.833	Oryzias_latipes_hni
ENSPMEG00000018537	si:ch211-117n7.8	100	76.419	ENSORLG00015018598	si:ch211-117n7.8	100	76.419	Oryzias_latipes_hsok
ENSPMEG00000018537	si:ch211-117n7.8	99	75.468	ENSOMEG00000012229	si:ch211-117n7.8	99	79.545	Oryzias_melastigma
ENSPMEG00000018537	si:ch211-117n7.8	83	55.713	ENSOGAG00000001076	SRBD1	98	50.150	Otolemur_garnettii
ENSPMEG00000018537	si:ch211-117n7.8	93	49.552	ENSOARG00000005958	SRBD1	98	48.243	Ovis_aries
ENSPMEG00000018537	si:ch211-117n7.8	83	56.958	ENSPPAG00000038442	SRBD1	98	51.241	Pan_paniscus
ENSPMEG00000018537	si:ch211-117n7.8	93	53.886	ENSPPRG00000003449	SRBD1	98	52.208	Panthera_pardus
ENSPMEG00000018537	si:ch211-117n7.8	93	53.423	ENSPTIG00000012495	SRBD1	98	51.768	Panthera_tigris_altaica
ENSPMEG00000018537	si:ch211-117n7.8	83	56.958	ENSPTRG00000011889	SRBD1	98	51.241	Pan_troglodytes
ENSPMEG00000018537	si:ch211-117n7.8	97	51.357	ENSPANG00000008063	SRBD1	98	51.039	Papio_anubis
ENSPMEG00000018537	si:ch211-117n7.8	94	64.301	ENSPKIG00000021973	si:ch211-117n7.8	99	61.793	Paramormyrops_kingsleyae
ENSPMEG00000018537	si:ch211-117n7.8	84	57.706	ENSPSIG00000008992	SRBD1	100	51.798	Pelodiscus_sinensis
ENSPMEG00000018537	si:ch211-117n7.8	85	79.181	ENSPMGG00000013348	si:ch211-117n7.8	99	72.654	Periophthalmus_magnuspinnatus
ENSPMEG00000018537	si:ch211-117n7.8	98	50.487	ENSPEMG00000020684	Srbd1	99	50.487	Peromyscus_maniculatus_bairdii
ENSPMEG00000018537	si:ch211-117n7.8	100	99.800	ENSPFOG00000010650	si:ch211-117n7.8	100	99.800	Poecilia_formosa
ENSPMEG00000018537	si:ch211-117n7.8	100	99.002	ENSPLAG00000002141	si:ch211-117n7.8	100	99.002	Poecilia_latipinna
ENSPMEG00000018537	si:ch211-117n7.8	100	93.049	ENSPREG00000003258	si:ch211-117n7.8	100	93.049	Poecilia_reticulata
ENSPMEG00000018537	si:ch211-117n7.8	97	48.528	ENSPPYG00000012444	SRBD1	97	48.176	Pongo_abelii
ENSPMEG00000018537	si:ch211-117n7.8	75	52.632	ENSPCAG00000005629	SRBD1	80	52.632	Procavia_capensis
ENSPMEG00000018537	si:ch211-117n7.8	93	45.688	ENSPCOG00000017669	SRBD1	99	43.846	Propithecus_coquereli
ENSPMEG00000018537	si:ch211-117n7.8	83	50.883	ENSPVAG00000001782	SRBD1	98	46.040	Pteropus_vampyrus
ENSPMEG00000018537	si:ch211-117n7.8	97	74.949	ENSPNYG00000000508	si:ch211-117n7.8	100	75.153	Pundamilia_nyererei
ENSPMEG00000018537	si:ch211-117n7.8	96	67.215	ENSPNAG00000013492	SRBD1	97	66.937	Pygocentrus_nattereri
ENSPMEG00000018537	si:ch211-117n7.8	84	55.621	ENSRNOG00000014720	Srbd1	99	50.794	Rattus_norvegicus
ENSPMEG00000018537	si:ch211-117n7.8	97	51.769	ENSRBIG00000033486	SRBD1	98	51.343	Rhinopithecus_bieti
ENSPMEG00000018537	si:ch211-117n7.8	97	51.769	ENSRROG00000041599	SRBD1	98	51.343	Rhinopithecus_roxellana
ENSPMEG00000018537	si:ch211-117n7.8	83	56.840	ENSSBOG00000024982	SRBD1	98	51.142	Saimiri_boliviensis_boliviensis
ENSPMEG00000018537	si:ch211-117n7.8	86	67.436	ENSSFOG00015001128	si:ch211-117n7.8	94	67.436	Scleropages_formosus
ENSPMEG00000018537	si:ch211-117n7.8	100	77.096	ENSSMAG00000018256	si:ch211-117n7.8	100	77.096	Scophthalmus_maximus
ENSPMEG00000018537	si:ch211-117n7.8	93	80.478	ENSSLDG00000023189	si:ch211-117n7.8	99	79.088	Seriola_lalandi_dorsalis
ENSPMEG00000018537	si:ch211-117n7.8	93	50.575	ENSSARG00000009740	SRBD1	96	50.575	Sorex_araneus
ENSPMEG00000018537	si:ch211-117n7.8	85	59.298	ENSSPUG00000010475	SRBD1	99	55.923	Sphenodon_punctatus
ENSPMEG00000018537	si:ch211-117n7.8	97	76.115	ENSSPAG00000008092	-	99	76.115	Stegastes_partitus
ENSPMEG00000018537	si:ch211-117n7.8	93	53.807	ENSSSCG00000008445	SRBD1	94	53.807	Sus_scrofa
ENSPMEG00000018537	si:ch211-117n7.8	83	58.491	ENSTGUG00000003878	SRBD1	100	58.491	Taeniopygia_guttata
ENSPMEG00000018537	si:ch211-117n7.8	99	73.951	ENSTRUG00000007080	si:ch211-117n7.8	99	79.372	Takifugu_rubripes
ENSPMEG00000018537	si:ch211-117n7.8	98	72.574	ENSTNIG00000007464	si:ch211-117n7.8	98	72.574	Tetraodon_nigroviridis
ENSPMEG00000018537	si:ch211-117n7.8	64	80.851	ENSTBEG00000004556	SRBD1	69	80.851	Tupaia_belangeri
ENSPMEG00000018537	si:ch211-117n7.8	86	57.812	ENSTTRG00000011871	SRBD1	87	57.812	Tursiops_truncatus
ENSPMEG00000018537	si:ch211-117n7.8	83	57.833	ENSUAMG00000008126	SRBD1	97	55.435	Ursus_americanus
ENSPMEG00000018537	si:ch211-117n7.8	83	57.833	ENSUMAG00000012902	SRBD1	97	52.217	Ursus_maritimus
ENSPMEG00000018537	si:ch211-117n7.8	83	57.193	ENSVPAG00000006825	SRBD1	92	57.193	Vicugna_pacos
ENSPMEG00000018537	si:ch211-117n7.8	93	54.188	ENSVVUG00000005389	SRBD1	96	54.188	Vulpes_vulpes
ENSPMEG00000018537	si:ch211-117n7.8	98	45.793	ENSXETG00000002760	srbd1	99	45.985	Xenopus_tropicalis
ENSPMEG00000018537	si:ch211-117n7.8	100	95.210	ENSXMAG00000016861	si:ch211-117n7.8	100	95.210	Xiphophorus_maculatus