EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMEG00000018566 (Gene tree)
Gene ID: -
Gene Symbol: si:ch211-275j6.5 (1 of many)
Alias: -
Full Name: si:ch211-275j6.5
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Plus strand
Length: 2072 bases
Position: chrKQ552017.1:15395-17466
Accession: ZDB-GENE-130109-1
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000031434	RF-1	PF00472.20	1.2e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000024425	-	1206	-	ENSPMEP00000031434	168 (aa)	-	-

Gene Model

Click here to download ENSPMEG00000018566's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000018566's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMEG00000018566	si:ch211-275j6.5	100	100.000	ENSPMEG00000009201	si:ch211-275j6.5	100	100.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000018566	si:ch211-275j6.5	75	61.111	ENSG00000130921	C12orf65	83	61.345	Homo_sapiens
ENSPMEG00000018566	si:ch211-275j6.5	100	73.810	ENSAPOG00000000995	si:ch211-275j6.5	99	73.810	Acanthochromis_polyacanthus
ENSPMEG00000018566	si:ch211-275j6.5	92	74.839	ENSACIG00000001644	si:ch211-275j6.5	97	74.839	Amphilophus_citrinellus
ENSPMEG00000018566	si:ch211-275j6.5	92	78.710	ENSAOCG00000005589	si:ch211-275j6.5	97	78.710	Amphiprion_ocellaris
ENSPMEG00000018566	si:ch211-275j6.5	100	74.556	ENSAPEG00000024618	si:ch211-275j6.5	99	74.556	Amphiprion_percula
ENSPMEG00000018566	si:ch211-275j6.5	100	69.048	ENSATEG00000011661	si:ch211-275j6.5	90	69.048	Anabas_testudineus
ENSPMEG00000018566	si:ch211-275j6.5	71	65.000	ENSAPLG00000016073	C12orf65	100	65.000	Anas_platyrhynchos
ENSPMEG00000018566	si:ch211-275j6.5	76	64.122	ENSACAG00000015561	C12orf65	68	64.662	Anolis_carolinensis
ENSPMEG00000018566	si:ch211-275j6.5	63	65.094	ENSANAG00000022881	C12orf65	81	61.594	Aotus_nancymaae
ENSPMEG00000018566	si:ch211-275j6.5	100	73.810	ENSACLG00000023906	si:ch211-275j6.5	99	73.810	Astatotilapia_calliptera
ENSPMEG00000018566	si:ch211-275j6.5	67	74.561	ENSAMXG00000031765	si:ch211-275j6.5	80	72.308	Astyanax_mexicanus
ENSPMEG00000018566	si:ch211-275j6.5	85	61.111	ENSBTAG00000020503	C17H12orf65	81	61.111	Bos_taurus
ENSPMEG00000018566	si:ch211-275j6.5	64	62.963	ENSCJAG00000016579	C12orf65	81	60.870	Callithrix_jacchus
ENSPMEG00000018566	si:ch211-275j6.5	70	61.789	ENSCAFG00000007512	C26H12orf65	65	58.065	Canis_familiaris
ENSPMEG00000018566	si:ch211-275j6.5	70	61.789	ENSCAFG00020016169	C12orf65	93	58.065	Canis_lupus_dingo
ENSPMEG00000018566	si:ch211-275j6.5	78	64.885	ENSCHIG00000022229	C12orf65	72	64.394	Capra_hircus
ENSPMEG00000018566	si:ch211-275j6.5	61	66.990	ENSCAPG00000014691	C12orf65	76	60.714	Cavia_aperea
ENSPMEG00000018566	si:ch211-275j6.5	60	65.347	ENSCPOG00000007583	C12orf65	75	59.420	Cavia_porcellus
ENSPMEG00000018566	si:ch211-275j6.5	73	58.268	ENSCATG00000040685	C12orf65	93	55.975	Cercocebus_atys
ENSPMEG00000018566	si:ch211-275j6.5	52	68.966	ENSCLAG00000014329	C12orf65	65	61.983	Chinchilla_lanigera
ENSPMEG00000018566	si:ch211-275j6.5	63	65.094	ENSCSAG00000002068	C12orf65	91	55.975	Chlorocebus_sabaeus
ENSPMEG00000018566	si:ch211-275j6.5	88	58.108	ENSCPBG00000025970	C12orf65	87	58.108	Chrysemys_picta_bellii
ENSPMEG00000018566	si:ch211-275j6.5	58	65.979	ENSCGRG00001013424	2810006K23Rik	70	61.240	Cricetulus_griseus_chok1gshd
ENSPMEG00000018566	si:ch211-275j6.5	58	65.979	ENSCGRG00000003037	2810006K23Rik	70	61.240	Cricetulus_griseus_crigri
ENSPMEG00000018566	si:ch211-275j6.5	86	67.347	ENSCSEG00000014536	si:ch211-275j6.5	88	67.347	Cynoglossus_semilaevis
ENSPMEG00000018566	si:ch211-275j6.5	100	77.907	ENSCVAG00000023000	si:ch211-275j6.5	99	77.907	Cyprinodon_variegatus
ENSPMEG00000018566	si:ch211-275j6.5	94	63.522	ENSDARG00000097803	si:ch211-275j6.5	94	72.519	Danio_rerio
ENSPMEG00000018566	si:ch211-275j6.5	52	64.773	ENSDNOG00000034728	C12orf65	67	61.607	Dasypus_novemcinctus
ENSPMEG00000018566	si:ch211-275j6.5	68	60.000	ENSDORG00000026069	2810006K23Rik	76	59.420	Dipodomys_ordii
ENSPMEG00000018566	si:ch211-275j6.5	74	46.400	FBgn0050100	CG30100	85	46.400	Drosophila_melanogaster
ENSPMEG00000018566	si:ch211-275j6.5	63	63.810	ENSETEG00000005627	C12orf65	83	59.854	Echinops_telfairi
ENSPMEG00000018566	si:ch211-275j6.5	63	65.094	ENSEASG00005012587	C12orf65	80	61.594	Equus_asinus_asinus
ENSPMEG00000018566	si:ch211-275j6.5	64	64.486	ENSEEUG00000007231	C12orf65	80	58.273	Erinaceus_europaeus
ENSPMEG00000018566	si:ch211-275j6.5	96	61.585	ENSELUG00000015178	lg13h12orf65	98	61.585	Esox_lucius
ENSPMEG00000018566	si:ch211-275j6.5	77	55.634	ENSFALG00000009261	C12orf65	88	54.930	Ficedula_albicollis
ENSPMEG00000018566	si:ch211-275j6.5	100	86.310	ENSFHEG00000017567	si:ch211-275j6.5	99	86.310	Fundulus_heteroclitus
ENSPMEG00000018566	si:ch211-275j6.5	78	75.573	ENSGMOG00000012139	si:ch211-275j6.5	89	75.573	Gadus_morhua
ENSPMEG00000018566	si:ch211-275j6.5	95	54.717	ENSGALG00000029390	C15H12ORF65	95	54.717	Gallus_gallus
ENSPMEG00000018566	si:ch211-275j6.5	92	69.677	ENSGACG00000008255	si:ch211-275j6.5	97	69.677	Gasterosteus_aculeatus
ENSPMEG00000018566	si:ch211-275j6.5	66	62.162	ENSGAGG00000000823	C12orf65	84	59.375	Gopherus_agassizii
ENSPMEG00000018566	si:ch211-275j6.5	75	61.111	ENSGGOG00000012850	C12orf65	80	61.594	Gorilla_gorilla
ENSPMEG00000018566	si:ch211-275j6.5	100	73.810	ENSHBUG00000007273	si:ch211-275j6.5	99	73.810	Haplochromis_burtoni
ENSPMEG00000018566	si:ch211-275j6.5	52	68.966	ENSHGLG00000010966	C12orf65	65	63.636	Heterocephalus_glaber_female
ENSPMEG00000018566	si:ch211-275j6.5	52	68.966	ENSHGLG00100018631	C12orf65	65	63.636	Heterocephalus_glaber_male
ENSPMEG00000018566	si:ch211-275j6.5	89	68.212	ENSHCOG00000019848	si:ch211-275j6.5	89	68.212	Hippocampus_comes
ENSPMEG00000018566	si:ch211-275j6.5	79	70.896	ENSIPUG00000020793	si:ch211-275j6.5	82	70.896	Ictalurus_punctatus
ENSPMEG00000018566	si:ch211-275j6.5	75	59.524	ENSSTOG00000016463	C12orf65	77	61.940	Ictidomys_tridecemlineatus
ENSPMEG00000018566	si:ch211-275j6.5	76	58.915	ENSJJAG00000023360	2810006K23Rik	69	58.915	Jaculus_jaculus
ENSPMEG00000018566	si:ch211-275j6.5	95	77.358	ENSKMAG00000018733	si:ch211-275j6.5	99	77.358	Kryptolebias_marmoratus
ENSPMEG00000018566	si:ch211-275j6.5	93	57.051	ENSLACG00000017355	C12orf65	85	57.051	Latimeria_chalumnae
ENSPMEG00000018566	si:ch211-275j6.5	72	66.116	ENSLOCG00000005702	si:ch211-275j6.5	100	66.116	Lepisosteus_oculatus
ENSPMEG00000018566	si:ch211-275j6.5	67	67.257	ENSLAFG00000002134	C12orf65	68	67.257	Loxodonta_africana
ENSPMEG00000018566	si:ch211-275j6.5	73	58.268	ENSMMUG00000031495	C12orf65	93	55.975	Macaca_mulatta
ENSPMEG00000018566	si:ch211-275j6.5	63	65.094	ENSMNEG00000044673	C12orf65	93	55.346	Macaca_nemestrina
ENSPMEG00000018566	si:ch211-275j6.5	73	58.268	ENSMLEG00000044309	C12orf65	93	55.975	Mandrillus_leucophaeus
ENSPMEG00000018566	si:ch211-275j6.5	99	73.653	ENSMAMG00000017366	si:ch211-275j6.5	99	73.653	Mastacembelus_armatus
ENSPMEG00000018566	si:ch211-275j6.5	100	73.810	ENSMZEG00005000938	si:ch211-275j6.5	99	73.810	Maylandia_zebra
ENSPMEG00000018566	si:ch211-275j6.5	91	53.846	ENSMGAG00000003354	C12orf65	78	65.094	Meleagris_gallopavo
ENSPMEG00000018566	si:ch211-275j6.5	56	67.021	ENSMAUG00000010304	2810006K23Rik	75	67.021	Mesocricetus_auratus
ENSPMEG00000018566	si:ch211-275j6.5	65	62.385	ENSMICG00000037138	C12orf65	80	60.145	Microcebus_murinus
ENSPMEG00000018566	si:ch211-275j6.5	63	62.264	ENSMOCG00000017477	2810006K23Rik	70	60.465	Microtus_ochrogaster
ENSPMEG00000018566	si:ch211-275j6.5	100	68.639	ENSMMOG00000017134	si:ch211-275j6.5	99	68.639	Mola_mola
ENSPMEG00000018566	si:ch211-275j6.5	97	50.920	ENSMODG00000012450	C12orf65	90	50.920	Monodelphis_domestica
ENSPMEG00000018566	si:ch211-275j6.5	100	75.595	ENSMALG00000012291	si:ch211-275j6.5	99	75.595	Monopterus_albus
ENSPMEG00000018566	si:ch211-275j6.5	62	63.964	MGP_CAROLIEiJ_G0027747	2810006K23Rik	79	59.310	Mus_caroli
ENSPMEG00000018566	si:ch211-275j6.5	58	67.010	ENSMUSG00000047635	2810006K23Rik	70	62.016	Mus_musculus
ENSPMEG00000018566	si:ch211-275j6.5	59	65.657	MGP_SPRETEiJ_G0028745	2810006K23Rik	70	62.016	Mus_spretus
ENSPMEG00000018566	si:ch211-275j6.5	75	56.923	ENSMPUG00000001679	C12orf65	75	59.124	Mustela_putorius_furo
ENSPMEG00000018566	si:ch211-275j6.5	70	61.538	ENSMLUG00000007001	C12orf65	71	61.538	Myotis_lucifugus
ENSPMEG00000018566	si:ch211-275j6.5	79	60.902	ENSNGAG00000010625	2810006K23Rik	73	61.364	Nannospalax_galili
ENSPMEG00000018566	si:ch211-275j6.5	100	73.810	ENSNBRG00000008082	si:ch211-275j6.5	99	73.810	Neolamprologus_brichardi
ENSPMEG00000018566	si:ch211-275j6.5	75	61.111	ENSNLEG00000001470	C12orf65	80	61.594	Nomascus_leucogenys
ENSPMEG00000018566	si:ch211-275j6.5	92	53.846	ENSMEUG00000009430	C12orf65	96	53.846	Notamacropus_eugenii
ENSPMEG00000018566	si:ch211-275j6.5	85	54.930	ENSOPRG00000011029	C12orf65	85	54.930	Ochotona_princeps
ENSPMEG00000018566	si:ch211-275j6.5	82	56.522	ENSODEG00000011382	-	79	56.522	Octodon_degus
ENSPMEG00000018566	si:ch211-275j6.5	80	82.090	ENSONIG00000013298	si:ch211-275j6.5	80	82.090	Oreochromis_niloticus
ENSPMEG00000018566	si:ch211-275j6.5	92	55.975	ENSOANG00000012866	C12orf65	89	55.975	Ornithorhynchus_anatinus
ENSPMEG00000018566	si:ch211-275j6.5	61	62.136	ENSOCUG00000011888	C12orf65	69	62.136	Oryctolagus_cuniculus
ENSPMEG00000018566	si:ch211-275j6.5	96	73.292	ENSORLG00000006153	si:ch211-275j6.5	96	73.292	Oryzias_latipes
ENSPMEG00000018566	si:ch211-275j6.5	96	73.913	ENSORLG00020017188	si:ch211-275j6.5	96	73.913	Oryzias_latipes_hni
ENSPMEG00000018566	si:ch211-275j6.5	96	73.292	ENSORLG00015005780	c9h12orf65	96	73.292	Oryzias_latipes_hsok
ENSPMEG00000018566	si:ch211-275j6.5	96	70.552	ENSOMEG00000001663	si:ch211-275j6.5	97	70.552	Oryzias_melastigma
ENSPMEG00000018566	si:ch211-275j6.5	65	59.633	ENSOGAG00000010778	C12orf65	82	57.971	Otolemur_garnettii
ENSPMEG00000018566	si:ch211-275j6.5	78	63.359	ENSOARG00000005214	C12orf65	75	63.359	Ovis_aries
ENSPMEG00000018566	si:ch211-275j6.5	75	61.111	ENSPPAG00000029654	C12orf65	80	61.594	Pan_paniscus
ENSPMEG00000018566	si:ch211-275j6.5	67	65.789	ENSPPRG00000024772	C12orf65	78	60.769	Panthera_pardus
ENSPMEG00000018566	si:ch211-275j6.5	77	60.305	ENSPTIG00000011744	C12orf65	78	60.305	Panthera_tigris_altaica
ENSPMEG00000018566	si:ch211-275j6.5	75	61.905	ENSPTRG00000005595	C12H12orf65	80	62.319	Pan_troglodytes
ENSPMEG00000018566	si:ch211-275j6.5	73	58.268	ENSPANG00000015388	C12orf65	93	55.975	Papio_anubis
ENSPMEG00000018566	si:ch211-275j6.5	77	70.543	ENSPKIG00000001571	si:ch211-275j6.5	77	70.543	Paramormyrops_kingsleyae
ENSPMEG00000018566	si:ch211-275j6.5	96	56.790	ENSPSIG00000013010	C12orf65	87	56.790	Pelodiscus_sinensis
ENSPMEG00000018566	si:ch211-275j6.5	79	73.684	ENSPMGG00000018342	si:ch211-275j6.5	78	74.242	Periophthalmus_magnuspinnatus
ENSPMEG00000018566	si:ch211-275j6.5	61	57.843	ENSPMAG00000000514	si:ch211-275j6.5	85	57.447	Petromyzon_marinus
ENSPMEG00000018566	si:ch211-275j6.5	90	51.974	ENSPCIG00000010996	C12orf65	60	62.136	Phascolarctos_cinereus
ENSPMEG00000018566	si:ch211-275j6.5	100	99.405	ENSPLAG00000001661	si:ch211-275j6.5	99	99.405	Poecilia_latipinna
ENSPMEG00000018566	si:ch211-275j6.5	100	95.833	ENSPREG00000021268	si:ch211-275j6.5	99	95.833	Poecilia_reticulata
ENSPMEG00000018566	si:ch211-275j6.5	63	66.038	ENSPPYG00000005082	C12orf65	80	61.594	Pongo_abelii
ENSPMEG00000018566	si:ch211-275j6.5	59	64.646	ENSPCAG00000016193	C12orf65	80	59.701	Procavia_capensis
ENSPMEG00000018566	si:ch211-275j6.5	65	63.303	ENSPCOG00000021574	C12orf65	74	60.870	Propithecus_coquereli
ENSPMEG00000018566	si:ch211-275j6.5	77	63.077	ENSPVAG00000015301	C12orf65	82	59.859	Pteropus_vampyrus
ENSPMEG00000018566	si:ch211-275j6.5	100	73.810	ENSPNYG00000014456	si:ch211-275j6.5	99	73.810	Pundamilia_nyererei
ENSPMEG00000018566	si:ch211-275j6.5	98	60.606	ENSPNAG00000019769	si:ch211-275j6.5	93	60.606	Pygocentrus_nattereri
ENSPMEG00000018566	si:ch211-275j6.5	59	65.657	ENSRNOG00000001073	RGD1563482	71	62.791	Rattus_norvegicus
ENSPMEG00000018566	si:ch211-275j6.5	63	66.038	ENSRBIG00000040789	C12orf65	80	61.594	Rhinopithecus_bieti
ENSPMEG00000018566	si:ch211-275j6.5	63	65.094	ENSRROG00000031384	C12orf65	79	60.870	Rhinopithecus_roxellana
ENSPMEG00000018566	si:ch211-275j6.5	63	66.038	ENSSBOG00000026629	C12orf65	78	60.870	Saimiri_boliviensis_boliviensis
ENSPMEG00000018566	si:ch211-275j6.5	66	65.766	ENSSHAG00000014988	C12orf65	56	66.019	Sarcophilus_harrisii
ENSPMEG00000018566	si:ch211-275j6.5	99	62.791	ENSSFOG00015019122	si:ch211-275j6.5	98	61.988	Scleropages_formosus
ENSPMEG00000018566	si:ch211-275j6.5	100	72.619	ENSSMAG00000016770	si:ch211-275j6.5	99	72.619	Scophthalmus_maximus
ENSPMEG00000018566	si:ch211-275j6.5	90	75.000	ENSSDUG00000020401	si:ch211-275j6.5	94	75.000	Seriola_dumerili
ENSPMEG00000018566	si:ch211-275j6.5	100	70.238	ENSSLDG00000017638	si:ch211-275j6.5	99	70.238	Seriola_lalandi_dorsalis
ENSPMEG00000018566	si:ch211-275j6.5	95	54.088	ENSSPUG00000012613	C12orf65	89	54.088	Sphenodon_punctatus
ENSPMEG00000018566	si:ch211-275j6.5	100	74.405	ENSSPAG00000023476	si:ch211-275j6.5	99	74.405	Stegastes_partitus
ENSPMEG00000018566	si:ch211-275j6.5	66	63.793	ENSSSCG00000009774	C12orf65	78	64.655	Sus_scrofa
ENSPMEG00000018566	si:ch211-275j6.5	71	60.833	ENSTGUG00000005440	C12orf65	78	66.000	Taeniopygia_guttata
ENSPMEG00000018566	si:ch211-275j6.5	99	70.060	ENSTNIG00000015832	si:ch211-275j6.5	99	70.060	Tetraodon_nigroviridis
ENSPMEG00000018566	si:ch211-275j6.5	58	69.697	ENSTBEG00000012500	C12orf65	78	65.116	Tupaia_belangeri
ENSPMEG00000018566	si:ch211-275j6.5	71	63.866	ENSTTRG00000015880	C12orf65	81	60.432	Tursiops_truncatus
ENSPMEG00000018566	si:ch211-275j6.5	55	70.968	ENSUAMG00000019669	C12orf65	76	64.800	Ursus_americanus
ENSPMEG00000018566	si:ch211-275j6.5	55	70.968	ENSUMAG00000004025	C12orf65	76	64.800	Ursus_maritimus
ENSPMEG00000018566	si:ch211-275j6.5	70	60.976	ENSVVUG00000027811	C12orf65	93	57.419	Vulpes_vulpes
ENSPMEG00000018566	si:ch211-275j6.5	100	94.643	ENSXCOG00000000975	si:ch211-275j6.5	99	94.643	Xiphophorus_couchianus