EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMEG00000019159 (Gene tree)
Gene ID: 106905591
Gene Symbol: si:dkey-13a21.4
Alias: -
Full Name: ras-related protein Rab-7a-like
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Minus strand
Length: 1975 bases
Position: chrKQ553141.1:46329-48303
Accession: 106905591
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000031798	MMR_HSR1	PF01926.23	2.5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000025105	-	693	XM_014970498	ENSPMEP00000031798	204 (aa)	XP_014825984	UPI0004444064

Gene Model

Click here to download ENSPMEG00000019159's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000019159's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMEG00000019159	si:dkey-13a21.4	96	33.333	ENSPMEG00000019167	rab6ba	94	33.333
ENSPMEG00000019159	si:dkey-13a21.4	74	36.538	ENSPMEG00000019646	-	64	36.538
ENSPMEG00000019159	si:dkey-13a21.4	77	32.911	ENSPMEG00000007917	rab11ba	53	32.911
ENSPMEG00000019159	si:dkey-13a21.4	71	31.724	ENSPMEG00000020891	hrasb	80	32.692
ENSPMEG00000019159	si:dkey-13a21.4	75	31.613	ENSPMEG00000014302	rheb	82	31.613
ENSPMEG00000019159	si:dkey-13a21.4	76	39.355	ENSPMEG00000013085	rab18a	75	39.355
ENSPMEG00000019159	si:dkey-13a21.4	72	36.184	ENSPMEG00000015292	rab36	83	36.184
ENSPMEG00000019159	si:dkey-13a21.4	77	36.646	ENSPMEG00000012932	si:dkey-34d22.5	71	36.646
ENSPMEG00000019159	si:dkey-13a21.4	79	36.420	ENSPMEG00000022988	-	79	36.420
ENSPMEG00000019159	si:dkey-13a21.4	88	33.880	ENSPMEG00000013297	rab34b	71	33.880
ENSPMEG00000019159	si:dkey-13a21.4	80	36.970	ENSPMEG00000003046	rab1ab	79	36.970
ENSPMEG00000019159	si:dkey-13a21.4	84	36.416	ENSPMEG00000001400	rab25b	81	36.416
ENSPMEG00000019159	si:dkey-13a21.4	94	31.959	ENSPMEG00000002564	-	78	31.959
ENSPMEG00000019159	si:dkey-13a21.4	65	31.343	ENSPMEG00000017927	RRAS2	92	31.343
ENSPMEG00000019159	si:dkey-13a21.4	96	35.294	ENSPMEG00000003177	rab33a	70	35.294
ENSPMEG00000019159	si:dkey-13a21.4	96	32.836	ENSPMEG00000003369	rab6a	94	32.836
ENSPMEG00000019159	si:dkey-13a21.4	79	33.742	ENSPMEG00000012614	-	71	33.742
ENSPMEG00000019159	si:dkey-13a21.4	65	31.343	ENSPMEG00000018380	rras2	78	31.343
ENSPMEG00000019159	si:dkey-13a21.4	83	50.877	ENSPMEG00000013734	rab9b	77	50.877
ENSPMEG00000019159	si:dkey-13a21.4	79	34.146	ENSPMEG00000010417	rab12	66	34.146
ENSPMEG00000019159	si:dkey-13a21.4	76	41.290	ENSPMEG00000008223	rab18b	74	41.290
ENSPMEG00000019159	si:dkey-13a21.4	85	34.286	ENSPMEG00000006424	-	82	34.783
ENSPMEG00000019159	si:dkey-13a21.4	94	35.961	ENSPMEG00000017300	rab23	84	35.961
ENSPMEG00000019159	si:dkey-13a21.4	80	36.970	ENSPMEG00000005288	-	80	36.970
ENSPMEG00000019159	si:dkey-13a21.4	96	32.836	ENSPMEG00000021872	rab6bb	94	32.836
ENSPMEG00000019159	si:dkey-13a21.4	77	34.810	ENSPMEG00000005491	rab25a	73	34.810
ENSPMEG00000019159	si:dkey-13a21.4	77	34.177	ENSPMEG00000007932	rab11a	72	34.177
ENSPMEG00000019159	si:dkey-13a21.4	80	30.723	ENSPMEG00000021391	rasd4	75	30.723
ENSPMEG00000019159	si:dkey-13a21.4	85	33.714	ENSPMEG00000010857	rab14	80	33.714
ENSPMEG00000019159	si:dkey-13a21.4	77	32.911	ENSPMEG00000007842	-	71	32.911
ENSPMEG00000019159	si:dkey-13a21.4	80	34.132	ENSPMEG00000000804	rab11al	75	34.132
ENSPMEG00000019159	si:dkey-13a21.4	90	40.000	ENSPMEG00000009701	rab30	89	40.000
ENSPMEG00000019159	si:dkey-13a21.4	79	38.272	ENSPMEG00000022350	zgc:171927	76	38.272
ENSPMEG00000019159	si:dkey-13a21.4	83	37.059	ENSPMEG00000007165	si:dkey-16l2.16	79	37.059
ENSPMEG00000019159	si:dkey-13a21.4	79	34.146	ENSPMEG00000021807	RAB29	80	34.146
ENSPMEG00000019159	si:dkey-13a21.4	87	53.371	ENSPMEG00000021641	-	86	53.371
ENSPMEG00000019159	si:dkey-13a21.4	71	31.034	ENSPMEG00000019525	KRAS	80	32.051
ENSPMEG00000019159	si:dkey-13a21.4	81	51.807	ENSPMEG00000023735	rab9a	82	51.807
ENSPMEG00000019159	si:dkey-13a21.4	88	34.426	ENSPMEG00000002086	rab34a	68	34.426
ENSPMEG00000019159	si:dkey-13a21.4	65	31.343	ENSPMEG00000010573	-	92	31.343
ENSPMEG00000019159	si:dkey-13a21.4	83	42.353	ENSPMEG00000021947	rab35b	82	42.353
ENSPMEG00000019159	si:dkey-13a21.4	88	34.254	ENSPMEG00000012205	rab4a	83	34.254
ENSPMEG00000019159	si:dkey-13a21.4	80	35.152	ENSPMEG00000002054	rab1ba	80	35.152
ENSPMEG00000019159	si:dkey-13a21.4	79	35.583	ENSPMEG00000011336	rab5c	72	35.583
ENSPMEG00000019159	si:dkey-13a21.4	77	38.365	ENSPMEG00000019497	rab42a	72	38.365
ENSPMEG00000019159	si:dkey-13a21.4	77	38.365	ENSPMEG00000007976	-	73	38.365
ENSPMEG00000019159	si:dkey-13a21.4	94	31.959	ENSPMEG00000017161	-	78	31.959
ENSPMEG00000019159	si:dkey-13a21.4	99	34.450	ENSPMEG00000014170	rab41	97	34.450
ENSPMEG00000019159	si:dkey-13a21.4	75	30.968	ENSPMEG00000020579	rhebl1	82	30.968
ENSPMEG00000019159	si:dkey-13a21.4	77	38.125	ENSPMEG00000004946	RAB39B	74	38.125
ENSPMEG00000019159	si:dkey-13a21.4	83	50.877	ENSPMEG00000024399	rab9b	77	50.877
ENSPMEG00000019159	si:dkey-13a21.4	99	43.662	ENSPMEG00000010190	RAB9A	97	43.662
ENSPMEG00000019159	si:dkey-13a21.4	77	37.736	ENSPMEG00000003743	rab22a	80	37.736
ENSPMEG00000019159	si:dkey-13a21.4	79	36.420	ENSPMEG00000008020	-	79	36.420
ENSPMEG00000019159	si:dkey-13a21.4	77	31.210	ENSPMEG00000004703	rabl2	68	31.210
ENSPMEG00000019159	si:dkey-13a21.4	76	30.128	ENSPMEG00000011210	si:cabz01085950.1	75	30.128
ENSPMEG00000019159	si:dkey-13a21.4	97	32.212	ENSPMEG00000000408	RAB15	97	32.212
ENSPMEG00000019159	si:dkey-13a21.4	76	35.032	ENSPMEG00000018256	dnajc27	58	35.032
ENSPMEG00000019159	si:dkey-13a21.4	74	30.818	ENSPMEG00000000230	rasl11b	63	30.818
ENSPMEG00000019159	si:dkey-13a21.4	79	35.583	ENSPMEG00000007238	rab5aa	74	35.583
ENSPMEG00000019159	si:dkey-13a21.4	97	50.249	ENSPMEG00000004392	RAB7A	97	50.249
ENSPMEG00000019159	si:dkey-13a21.4	73	38.000	ENSPMEG00000022709	rab33ba	61	38.000
ENSPMEG00000019159	si:dkey-13a21.4	84	35.838	ENSPMEG00000021986	rab15	79	35.838
ENSPMEG00000019159	si:dkey-13a21.4	77	32.911	ENSPMEG00000012389	rab11bb	75	32.911
ENSPMEG00000019159	si:dkey-13a21.4	75	37.179	ENSPMEG00000010152	zgc:101559	65	37.179

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000019159	si:dkey-13a21.4	100	82.843	ENSACIG00000011024	si:dkey-13a21.4	100	82.843	Amphilophus_citrinellus
ENSPMEG00000019159	si:dkey-13a21.4	100	82.353	ENSAOCG00000020491	si:dkey-13a21.4	100	82.353	Amphiprion_ocellaris
ENSPMEG00000019159	si:dkey-13a21.4	100	82.353	ENSAPEG00000023338	si:dkey-13a21.4	92	82.353	Amphiprion_percula
ENSPMEG00000019159	si:dkey-13a21.4	100	80.392	ENSATEG00000014958	si:dkey-13a21.4	100	80.392	Anabas_testudineus
ENSPMEG00000019159	si:dkey-13a21.4	96	51.795	ENSACAG00000012345	-	97	51.795	Anolis_carolinensis
ENSPMEG00000019159	si:dkey-13a21.4	100	82.843	ENSACLG00000021109	si:dkey-13a21.4	99	82.843	Astatotilapia_calliptera
ENSPMEG00000019159	si:dkey-13a21.4	100	51.659	ENSAMXG00000032663	si:dkey-13a21.4	97	51.659	Astyanax_mexicanus
ENSPMEG00000019159	si:dkey-13a21.4	89	53.005	WBGene00004271	rab-7	100	48.325	Caenorhabditis_elegans
ENSPMEG00000019159	si:dkey-13a21.4	100	91.176	ENSCVAG00000001150	si:dkey-13a21.4	100	91.176	Cyprinodon_variegatus
ENSPMEG00000019159	si:dkey-13a21.4	100	61.765	ENSDARG00000026098	si:dkey-13a21.4	99	61.765	Danio_rerio
ENSPMEG00000019159	si:dkey-13a21.4	87	50.000	ENSDNOG00000043559	-	96	47.475	Dasypus_novemcinctus
ENSPMEG00000019159	si:dkey-13a21.4	100	88.293	ENSFHEG00000002502	si:dkey-13a21.4	100	88.293	Fundulus_heteroclitus
ENSPMEG00000019159	si:dkey-13a21.4	100	98.039	ENSGAFG00000020102	si:dkey-13a21.4	100	98.039	Gambusia_affinis
ENSPMEG00000019159	si:dkey-13a21.4	100	83.333	ENSHBUG00000014023	si:dkey-13a21.4	99	83.333	Haplochromis_burtoni
ENSPMEG00000019159	si:dkey-13a21.4	86	80.682	ENSKMAG00000021039	si:dkey-13a21.4	74	80.682	Kryptolebias_marmoratus
ENSPMEG00000019159	si:dkey-13a21.4	100	82.843	ENSLBEG00000018180	si:dkey-13a21.4	100	82.843	Labrus_bergylta
ENSPMEG00000019159	si:dkey-13a21.4	100	58.252	ENSLOCG00000014749	si:dkey-13a21.4	100	58.252	Lepisosteus_oculatus
ENSPMEG00000019159	si:dkey-13a21.4	84	55.556	ENSLAFG00000028984	-	83	55.556	Loxodonta_africana
ENSPMEG00000019159	si:dkey-13a21.4	100	81.373	ENSMAMG00000021095	si:dkey-13a21.4	100	81.373	Mastacembelus_armatus
ENSPMEG00000019159	si:dkey-13a21.4	100	82.843	ENSMZEG00005010220	si:dkey-13a21.4	99	82.843	Maylandia_zebra
ENSPMEG00000019159	si:dkey-13a21.4	99	83.168	ENSNBRG00000023214	si:dkey-13a21.4	98	83.168	Neolamprologus_brichardi
ENSPMEG00000019159	si:dkey-13a21.4	100	82.843	ENSONIG00000020296	si:dkey-13a21.4	100	82.843	Oreochromis_niloticus
ENSPMEG00000019159	si:dkey-13a21.4	100	79.412	ENSORLG00000025098	si:dkey-13a21.4	100	79.412	Oryzias_latipes
ENSPMEG00000019159	si:dkey-13a21.4	100	79.902	ENSORLG00020019465	si:dkey-13a21.4	100	79.902	Oryzias_latipes_hni
ENSPMEG00000019159	si:dkey-13a21.4	100	79.902	ENSORLG00015015121	si:dkey-13a21.4	100	79.902	Oryzias_latipes_hsok
ENSPMEG00000019159	si:dkey-13a21.4	96	61.929	ENSPKIG00000008691	si:dkey-13a21.4	96	61.929	Paramormyrops_kingsleyae
ENSPMEG00000019159	si:dkey-13a21.4	99	75.248	ENSPMGG00000023170	si:dkey-13a21.4	96	75.248	Periophthalmus_magnuspinnatus
ENSPMEG00000019159	si:dkey-13a21.4	100	100.000	ENSPFOG00000015409	si:dkey-13a21.4	100	100.000	Poecilia_formosa
ENSPMEG00000019159	si:dkey-13a21.4	100	100.000	ENSPLAG00000019688	si:dkey-13a21.4	100	100.000	Poecilia_latipinna
ENSPMEG00000019159	si:dkey-13a21.4	100	97.549	ENSPREG00000022241	si:dkey-13a21.4	100	97.549	Poecilia_reticulata
ENSPMEG00000019159	si:dkey-13a21.4	100	82.843	ENSPNYG00000018613	si:dkey-13a21.4	99	82.843	Pundamilia_nyererei
ENSPMEG00000019159	si:dkey-13a21.4	96	43.781	YML001W	YPT7	96	43.781	Saccharomyces_cerevisiae
ENSPMEG00000019159	si:dkey-13a21.4	96	60.714	ENSSFOG00015009566	si:dkey-13a21.4	96	60.714	Scleropages_formosus
ENSPMEG00000019159	si:dkey-13a21.4	99	80.296	ENSSMAG00000013945	si:dkey-13a21.4	99	80.296	Scophthalmus_maximus
ENSPMEG00000019159	si:dkey-13a21.4	100	84.314	ENSSDUG00000019738	si:dkey-13a21.4	100	84.314	Seriola_dumerili
ENSPMEG00000019159	si:dkey-13a21.4	100	84.314	ENSSLDG00000011597	si:dkey-13a21.4	100	84.314	Seriola_lalandi_dorsalis
ENSPMEG00000019159	si:dkey-13a21.4	96	53.333	ENSXETG00000014257	mgc75872	97	53.333	Xenopus_tropicalis