EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMEG00000019497 (Gene tree)
Gene ID: 106925943
Gene Symbol: rab42a
Alias: -
Full Name: ras-related protein Rab-39B-like
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Minus strand
Length: 9416 bases
Position: chrKQ551798.1:77401-86816
Accession: 106925943
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000016782	MMR_HSR1	PF01926.23	5.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000025466	-	1139	XM_015000527	ENSPMEP00000016782	218 (aa)	XP_014856013	UPI0004447F9E

Gene Model

Click here to download ENSPMEG00000019497's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000019497's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMEG00000019497	rab42a	76	42.614	ENSPMEG00000019646	-	73	42.614
ENSPMEG00000019497	rab42a	75	38.415	ENSPMEG00000011336	rab5c	74	38.415
ENSPMEG00000019497	rab42a	75	39.881	ENSPMEG00000010190	RAB9A	76	39.881
ENSPMEG00000019497	rab42a	72	38.509	ENSPMEG00000023735	rab9a	79	38.509
ENSPMEG00000019497	rab42a	79	42.442	ENSPMEG00000021947	rab35b	84	42.442
ENSPMEG00000019497	rab42a	85	40.860	ENSPMEG00000007932	rab11a	86	40.860
ENSPMEG00000019497	rab42a	79	43.023	ENSPMEG00000008020	-	85	43.023
ENSPMEG00000019497	rab42a	85	41.398	ENSPMEG00000007842	-	84	41.398
ENSPMEG00000019497	rab42a	98	37.850	ENSPMEG00000010857	rab14	97	37.850
ENSPMEG00000019497	rab42a	75	34.756	ENSPMEG00000003743	rab22a	84	34.756
ENSPMEG00000019497	rab42a	84	39.674	ENSPMEG00000002054	rab1ba	91	39.674
ENSPMEG00000019497	rab42a	69	37.500	ENSPMEG00000012042	si:ch73-116o1.2	78	37.195
ENSPMEG00000019497	rab42a	61	37.500	ENSPMEG00000010573	-	93	37.500
ENSPMEG00000019497	rab42a	69	34.437	ENSPMEG00000020891	hrasb	85	33.537
ENSPMEG00000019497	rab42a	87	31.795	ENSPMEG00000002086	rab34a	73	31.795
ENSPMEG00000019497	rab42a	83	32.967	ENSPMEG00000014302	rheb	93	32.967
ENSPMEG00000019497	rab42a	72	39.490	ENSPMEG00000014170	rab41	73	39.490
ENSPMEG00000019497	rab42a	76	40.606	ENSPMEG00000000408	RAB15	78	40.606
ENSPMEG00000019497	rab42a	61	37.500	ENSPMEG00000017927	RRAS2	93	37.500
ENSPMEG00000019497	rab42a	78	34.706	ENSPMEG00000000572	rras	85	34.706
ENSPMEG00000019497	rab42a	72	38.365	ENSPMEG00000019159	si:dkey-13a21.4	77	38.365
ENSPMEG00000019497	rab42a	67	44.595	ENSPMEG00000022709	rab33ba	61	44.595
ENSPMEG00000019497	rab42a	85	41.398	ENSPMEG00000012389	rab11bb	84	41.398
ENSPMEG00000019497	rab42a	96	37.143	ENSPMEG00000021986	rab15	96	37.143
ENSPMEG00000019497	rab42a	77	44.048	ENSPMEG00000022350	zgc:171927	78	45.122
ENSPMEG00000019497	rab42a	72	34.615	ENSPMEG00000017300	rab23	74	35.294
ENSPMEG00000019497	rab42a	76	41.212	ENSPMEG00000013085	rab18a	80	41.212
ENSPMEG00000019497	rab42a	75	40.237	ENSPMEG00000003177	rab33a	61	40.116
ENSPMEG00000019497	rab42a	72	38.854	ENSPMEG00000021872	rab6bb	75	38.854
ENSPMEG00000019497	rab42a	74	41.718	ENSPMEG00000017161	-	66	41.718
ENSPMEG00000019497	rab42a	98	37.850	ENSPMEG00000006424	-	97	37.850
ENSPMEG00000019497	rab42a	83	33.880	ENSPMEG00000013297	rab34b	71	33.880
ENSPMEG00000019497	rab42a	64	36.620	ENSPMEG00000018380	rras2	83	36.620
ENSPMEG00000019497	rab42a	75	36.585	ENSPMEG00000007238	rab5aa	75	36.585
ENSPMEG00000019497	rab42a	75	38.095	ENSPMEG00000024399	rab9b	75	38.095
ENSPMEG00000019497	rab42a	83	41.667	ENSPMEG00000009701	rab30	88	41.667
ENSPMEG00000019497	rab42a	72	39.490	ENSPMEG00000003369	rab6a	75	39.490
ENSPMEG00000019497	rab42a	75	30.539	ENSPMEG00000011210	si:cabz01085950.1	82	30.539
ENSPMEG00000019497	rab42a	100	55.046	ENSPMEG00000004946	RAB39B	100	55.046
ENSPMEG00000019497	rab42a	83	41.111	ENSPMEG00000001400	rab25b	85	41.111
ENSPMEG00000019497	rab42a	78	40.698	ENSPMEG00000010417	rab12	70	40.698
ENSPMEG00000019497	rab42a	70	34.177	ENSPMEG00000015292	rab36	88	34.177
ENSPMEG00000019497	rab42a	74	34.337	ENSPMEG00000021641	-	79	34.337
ENSPMEG00000019497	rab42a	88	35.938	ENSPMEG00000012205	rab4a	89	35.938
ENSPMEG00000019497	rab42a	76	42.424	ENSPMEG00000008223	rab18b	80	42.424
ENSPMEG00000019497	rab42a	69	34.437	ENSPMEG00000019525	KRAS	98	31.937
ENSPMEG00000019497	rab42a	75	31.928	ENSPMEG00000004703	rabl2	72	31.928
ENSPMEG00000019497	rab42a	100	39.450	ENSPMEG00000003046	rab1ab	100	39.450
ENSPMEG00000019497	rab42a	78	36.416	ENSPMEG00000021807	RAB29	83	36.416
ENSPMEG00000019497	rab42a	75	38.095	ENSPMEG00000013734	rab9b	75	38.095
ENSPMEG00000019497	rab42a	79	45.349	ENSPMEG00000007165	si:dkey-16l2.16	81	45.349
ENSPMEG00000019497	rab42a	77	31.737	ENSPMEG00000020579	rhebl1	88	31.737
ENSPMEG00000019497	rab42a	85	41.935	ENSPMEG00000007917	rab11ba	63	41.935
ENSPMEG00000019497	rab42a	86	60.000	ENSPMEG00000012932	si:dkey-34d22.5	86	60.000
ENSPMEG00000019497	rab42a	74	34.337	ENSPMEG00000004392	RAB7A	79	34.337
ENSPMEG00000019497	rab42a	84	41.530	ENSPMEG00000000804	rab11al	84	41.530
ENSPMEG00000019497	rab42a	79	43.023	ENSPMEG00000022988	-	85	43.023
ENSPMEG00000019497	rab42a	74	41.718	ENSPMEG00000002564	-	66	41.718
ENSPMEG00000019497	rab42a	77	30.357	ENSPMEG00000001179	-	84	30.357
ENSPMEG00000019497	rab42a	67	42.568	ENSPMEG00000010152	zgc:101559	63	42.568
ENSPMEG00000019497	rab42a	97	32.701	ENSPMEG00000019167	rab6ba	94	32.701
ENSPMEG00000019497	rab42a	93	57.426	ENSPMEG00000007976	-	95	57.426
ENSPMEG00000019497	rab42a	77	42.857	ENSPMEG00000005491	rab25a	79	42.857
ENSPMEG00000019497	rab42a	75	37.195	ENSPMEG00000012614	-	73	37.195
ENSPMEG00000019497	rab42a	82	43.258	ENSPMEG00000005288	-	87	43.258

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000019497	rab42a	100	94.495	ENSAPOG00000009188	rab42a	100	94.495	Acanthochromis_polyacanthus
ENSPMEG00000019497	rab42a	100	94.037	ENSACIG00000003102	rab42a	100	94.037	Amphilophus_citrinellus
ENSPMEG00000019497	rab42a	100	95.413	ENSAOCG00000012921	rab42a	83	95.413	Amphiprion_ocellaris
ENSPMEG00000019497	rab42a	100	95.413	ENSAPEG00000007713	rab42a	83	95.413	Amphiprion_percula
ENSPMEG00000019497	rab42a	100	92.661	ENSATEG00000009052	rab42a	100	92.661	Anabas_testudineus
ENSPMEG00000019497	rab42a	100	93.578	ENSACLG00000007514	rab42a	100	93.578	Astatotilapia_calliptera
ENSPMEG00000019497	rab42a	100	88.532	ENSAMXG00000032729	rab42a	100	88.532	Astyanax_mexicanus
ENSPMEG00000019497	rab42a	100	91.743	ENSCSEG00000010582	rab42a	100	91.743	Cynoglossus_semilaevis
ENSPMEG00000019497	rab42a	90	49.239	ENSDARG00000102580	CU571310.1	93	49.239	Danio_rerio
ENSPMEG00000019497	rab42a	100	89.908	ENSDARG00000034215	rab42a	100	89.908	Danio_rerio
ENSPMEG00000019497	rab42a	100	88.991	ENSELUG00000010345	rab42a	100	88.991	Esox_lucius
ENSPMEG00000019497	rab42a	100	97.706	ENSFHEG00000013106	rab42a	100	97.706	Fundulus_heteroclitus
ENSPMEG00000019497	rab42a	100	99.083	ENSGAFG00000002141	rab42a	100	99.083	Gambusia_affinis
ENSPMEG00000019497	rab42a	100	93.578	ENSHBUG00000015126	rab42a	82	93.578	Haplochromis_burtoni
ENSPMEG00000019497	rab42a	100	85.321	ENSIPUG00000011376	rab42a	100	85.321	Ictalurus_punctatus
ENSPMEG00000019497	rab42a	100	95.872	ENSKMAG00000007267	rab42a	100	95.872	Kryptolebias_marmoratus
ENSPMEG00000019497	rab42a	100	94.495	ENSLBEG00000001193	rab42a	100	94.954	Labrus_bergylta
ENSPMEG00000019497	rab42a	100	64.679	ENSLACG00000012755	-	100	64.679	Latimeria_chalumnae
ENSPMEG00000019497	rab42a	100	49.772	ENSLOCG00000015825	-	99	49.772	Lepisosteus_oculatus
ENSPMEG00000019497	rab42a	100	80.734	ENSLOCG00000003453	rab42a	100	80.734	Lepisosteus_oculatus
ENSPMEG00000019497	rab42a	100	94.954	ENSMAMG00000002296	rab42a	100	94.954	Mastacembelus_armatus
ENSPMEG00000019497	rab42a	100	93.578	ENSMZEG00005012460	rab42a	82	93.578	Maylandia_zebra
ENSPMEG00000019497	rab42a	100	90.826	ENSMMOG00000014358	rab42a	100	90.826	Mola_mola
ENSPMEG00000019497	rab42a	100	93.578	ENSNBRG00000021487	rab42a	82	93.578	Neolamprologus_brichardi
ENSPMEG00000019497	rab42a	100	94.495	ENSORLG00000022335	rab42a	100	94.495	Oryzias_latipes
ENSPMEG00000019497	rab42a	100	94.495	ENSORLG00020013895	rab42a	100	94.495	Oryzias_latipes_hni
ENSPMEG00000019497	rab42a	100	94.495	ENSORLG00015004273	rab42a	100	94.495	Oryzias_latipes_hsok
ENSPMEG00000019497	rab42a	100	94.495	ENSOMEG00000020418	rab42a	100	94.495	Oryzias_melastigma
ENSPMEG00000019497	rab42a	89	47.938	ENSPKIG00000015234	-	93	47.938	Paramormyrops_kingsleyae
ENSPMEG00000019497	rab42a	100	76.256	ENSPKIG00000021215	-	100	76.256	Paramormyrops_kingsleyae
ENSPMEG00000019497	rab42a	90	95.939	ENSPMGG00000024112	rab42a	90	95.939	Periophthalmus_magnuspinnatus
ENSPMEG00000019497	rab42a	100	100.000	ENSPFOG00000004838	rab42a	82	100.000	Poecilia_formosa
ENSPMEG00000019497	rab42a	100	99.541	ENSPLAG00000005628	rab42a	100	99.541	Poecilia_latipinna
ENSPMEG00000019497	rab42a	100	99.083	ENSPREG00000013962	rab42a	100	99.083	Poecilia_reticulata
ENSPMEG00000019497	rab42a	100	93.578	ENSPNYG00000010325	rab42a	82	93.578	Pundamilia_nyererei
ENSPMEG00000019497	rab42a	100	88.073	ENSPNAG00000016567	rab42a	100	88.073	Pygocentrus_nattereri
ENSPMEG00000019497	rab42a	100	45.662	ENSSFOG00015016000	-	97	45.662	Scleropages_formosus
ENSPMEG00000019497	rab42a	100	83.486	ENSSFOG00015020732	rab42a	100	83.486	Scleropages_formosus
ENSPMEG00000019497	rab42a	100	93.119	ENSSMAG00000020311	rab42a	100	93.119	Scophthalmus_maximus
ENSPMEG00000019497	rab42a	100	95.413	ENSSDUG00000011851	rab42a	100	95.413	Seriola_dumerili
ENSPMEG00000019497	rab42a	100	95.413	ENSSLDG00000020354	rab42a	100	95.413	Seriola_lalandi_dorsalis
ENSPMEG00000019497	rab42a	100	94.954	ENSSPAG00000016167	rab42a	100	94.954	Stegastes_partitus
ENSPMEG00000019497	rab42a	100	94.037	ENSTRUG00000010224	rab42a	100	94.037	Takifugu_rubripes
ENSPMEG00000019497	rab42a	100	98.624	ENSXCOG00000003428	rab42a	100	98.624	Xiphophorus_couchianus
ENSPMEG00000019497	rab42a	100	98.624	ENSXMAG00000028376	rab42a	100	98.624	Xiphophorus_maculatus