EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMEG00000019535 (Gene tree)
Gene ID: 106932127
Gene Symbol: slirp
Alias: -
Full Name: SRA stem-loop interacting RNA binding protein
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Minus strand
Length: 1463 bases
Position: chrKQ551041.1:202636-204098
Accession: 106932127
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000016808	RRM_1	PF00076.22	2.2e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000033532	-	303	XM_015010677	ENSPMEP00000016808	100 (aa)	XP_014866163	UPI0004442F72

Gene Model

Click here to download ENSPMEG00000019535's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000019535's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMEG00000019535	slirp	83	34.247	ENSPMEG00000023285	-	57	34.247

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000019535	slirp	86	53.488	ENSG00000119705	SLIRP	92	61.429	Homo_sapiens
ENSPMEG00000019535	slirp	99	76.768	ENSAPOG00000001298	slirp	99	76.768	Acanthochromis_polyacanthus
ENSPMEG00000019535	slirp	68	58.824	ENSAMEG00000003975	SLIRP	75	58.824	Ailuropoda_melanoleuca
ENSPMEG00000019535	slirp	97	75.258	ENSACIG00000023083	slirp	96	75.258	Amphilophus_citrinellus
ENSPMEG00000019535	slirp	97	75.258	ENSAOCG00000006342	slirp	98	75.258	Amphiprion_ocellaris
ENSPMEG00000019535	slirp	97	75.258	ENSAPEG00000015917	slirp	98	75.258	Amphiprion_percula
ENSPMEG00000019535	slirp	97	75.258	ENSAPEG00000015719	-	99	75.258	Amphiprion_percula
ENSPMEG00000019535	slirp	98	71.429	ENSATEG00000013525	slirp	98	71.429	Anabas_testudineus
ENSPMEG00000019535	slirp	98	60.204	ENSAMXG00000018693	slirp	98	60.204	Astyanax_mexicanus
ENSPMEG00000019535	slirp	88	55.682	ENSCJAG00000016946	SLIRP	81	55.682	Callithrix_jacchus
ENSPMEG00000019535	slirp	91	52.688	ENSCAFG00020015876	-	84	52.688	Canis_lupus_dingo
ENSPMEG00000019535	slirp	88	53.409	ENSCCAG00000030130	SLIRP	81	53.409	Cebus_capucinus
ENSPMEG00000019535	slirp	76	60.526	ENSCATG00000036327	SLIRP	72	64.179	Cercocebus_atys
ENSPMEG00000019535	slirp	88	53.409	ENSCSAG00000011736	SLIRP	81	53.409	Chlorocebus_sabaeus
ENSPMEG00000019535	slirp	79	58.228	ENSCPBG00000026327	SLIRP	80	58.228	Chrysemys_picta_bellii
ENSPMEG00000019535	slirp	67	62.687	ENSCANG00000032892	SLIRP	68	62.687	Colobus_angolensis_palliatus
ENSPMEG00000019535	slirp	99	47.059	ENSCGRG00001024068	Slirp	92	47.059	Cricetulus_griseus_chok1gshd
ENSPMEG00000019535	slirp	99	47.059	ENSCGRG00000017440	Slirp	92	47.059	Cricetulus_griseus_crigri
ENSPMEG00000019535	slirp	94	60.000	ENSCSEG00000015766	slirp	97	60.000	Cynoglossus_semilaevis
ENSPMEG00000019535	slirp	90	80.000	ENSCVAG00000012504	slirp	86	80.000	Cyprinodon_variegatus
ENSPMEG00000019535	slirp	91	75.824	ENSDARG00000097753	slirp	91	75.532	Danio_rerio
ENSPMEG00000019535	slirp	74	55.405	ENSDNOG00000007721	SLIRP	67	55.405	Dasypus_novemcinctus
ENSPMEG00000019535	slirp	76	53.947	ENSDORG00000012379	Slirp	68	53.947	Dipodomys_ordii
ENSPMEG00000019535	slirp	89	52.809	ENSETEG00000010345	SLIRP	81	52.809	Echinops_telfairi
ENSPMEG00000019535	slirp	74	58.108	ENSEASG00005020193	SLIRP	67	58.108	Equus_asinus_asinus
ENSPMEG00000019535	slirp	98	48.485	ENSEEUG00000007257	SLIRP	98	48.485	Erinaceus_europaeus
ENSPMEG00000019535	slirp	96	69.792	ENSELUG00000016800	slirp	95	69.792	Esox_lucius
ENSPMEG00000019535	slirp	71	53.521	ENSFCAG00000036326	SLIRP	72	53.521	Felis_catus
ENSPMEG00000019535	slirp	75	61.333	ENSFALG00000012583	SLIRP	85	54.444	Ficedula_albicollis
ENSPMEG00000019535	slirp	87	48.276	ENSFDAG00000008347	SLIRP	77	48.276	Fukomys_damarensis
ENSPMEG00000019535	slirp	77	84.416	ENSFHEG00000004709	slirp	84	84.416	Fundulus_heteroclitus
ENSPMEG00000019535	slirp	97	69.072	ENSGMOG00000016948	slirp	93	69.072	Gadus_morhua
ENSPMEG00000019535	slirp	88	57.955	ENSGALG00000031238	SLIRP	85	57.955	Gallus_gallus
ENSPMEG00000019535	slirp	99	89.899	ENSGAFG00000010998	slirp	99	89.899	Gambusia_affinis
ENSPMEG00000019535	slirp	79	81.013	ENSGACG00000020137	slirp	92	81.013	Gasterosteus_aculeatus
ENSPMEG00000019535	slirp	93	59.574	ENSGAGG00000009953	SLIRP	65	59.574	Gopherus_agassizii
ENSPMEG00000019535	slirp	77	59.740	ENSGGOG00000011059	-	73	61.765	Gorilla_gorilla
ENSPMEG00000019535	slirp	88	45.556	ENSHGLG00000018491	SLIRP	81	45.556	Heterocephalus_glaber_female
ENSPMEG00000019535	slirp	88	45.556	ENSHGLG00100014153	SLIRP	81	45.556	Heterocephalus_glaber_male
ENSPMEG00000019535	slirp	96	77.083	ENSHCOG00000006795	slirp	97	77.083	Hippocampus_comes
ENSPMEG00000019535	slirp	98	73.469	ENSIPUG00000010214	SLIRP	98	73.469	Ictalurus_punctatus
ENSPMEG00000019535	slirp	89	49.451	ENSSTOG00000034316	SLIRP	82	49.451	Ictidomys_tridecemlineatus
ENSPMEG00000019535	slirp	98	70.408	ENSKMAG00000002038	slirp	94	70.408	Kryptolebias_marmoratus
ENSPMEG00000019535	slirp	99	72.727	ENSLBEG00000007564	slirp	99	72.727	Labrus_bergylta
ENSPMEG00000019535	slirp	96	68.750	ENSLACG00000013434	SLIRP	92	68.750	Latimeria_chalumnae
ENSPMEG00000019535	slirp	88	53.409	ENSMFAG00000042960	SLIRP	72	64.179	Macaca_fascicularis
ENSPMEG00000019535	slirp	84	58.333	ENSMMUG00000029256	SLIRP	72	64.179	Macaca_mulatta
ENSPMEG00000019535	slirp	88	53.409	ENSMNEG00000028921	SLIRP	72	64.179	Macaca_nemestrina
ENSPMEG00000019535	slirp	74	60.811	ENSMLEG00000043644	SLIRP	68	64.179	Mandrillus_leucophaeus
ENSPMEG00000019535	slirp	97	78.351	ENSMZEG00005004617	slirp	98	78.351	Maylandia_zebra
ENSPMEG00000019535	slirp	88	51.111	ENSMAUG00000003857	Slirp	81	51.111	Mesocricetus_auratus
ENSPMEG00000019535	slirp	88	45.556	ENSMICG00000012080	SLIRP	64	63.768	Microcebus_murinus
ENSPMEG00000019535	slirp	72	55.556	ENSMOCG00000016019	Slirp	69	54.286	Microtus_ochrogaster
ENSPMEG00000019535	slirp	99	73.737	ENSMMOG00000018268	slirp	99	73.737	Mola_mola
ENSPMEG00000019535	slirp	69	55.072	ENSMODG00000005207	-	97	55.072	Monodelphis_domestica
ENSPMEG00000019535	slirp	98	74.490	ENSMALG00000012581	slirp	100	74.490	Monopterus_albus
ENSPMEG00000019535	slirp	85	53.684	MGP_CAROLIEiJ_G0017995	Slirp	88	53.684	Mus_caroli
ENSPMEG00000019535	slirp	100	47.748	ENSMUSG00000021040	Slirp	99	47.748	Mus_musculus
ENSPMEG00000019535	slirp	100	47.748	MGP_SPRETEiJ_G0018840	Slirp	99	47.748	Mus_spretus
ENSPMEG00000019535	slirp	73	56.164	ENSMLUG00000024998	-	74	52.381	Myotis_lucifugus
ENSPMEG00000019535	slirp	98	48.000	ENSMLUG00000029544	-	88	48.000	Myotis_lucifugus
ENSPMEG00000019535	slirp	74	52.703	ENSNGAG00000016363	Slirp	71	52.703	Nannospalax_galili
ENSPMEG00000019535	slirp	89	49.438	ENSNLEG00000027238	-	79	57.971	Nomascus_leucogenys
ENSPMEG00000019535	slirp	89	49.438	ENSNLEG00000032459	-	82	49.438	Nomascus_leucogenys
ENSPMEG00000019535	slirp	89	50.549	ENSODEG00000012580	SLIRP	76	57.143	Octodon_degus
ENSPMEG00000019535	slirp	97	77.320	ENSONIG00000011692	slirp	98	77.320	Oreochromis_niloticus
ENSPMEG00000019535	slirp	89	54.945	ENSOANG00000022366	SLIRP	82	54.945	Ornithorhynchus_anatinus
ENSPMEG00000019535	slirp	99	73.737	ENSORLG00000010761	slirp	77	73.737	Oryzias_latipes
ENSPMEG00000019535	slirp	99	72.727	ENSORLG00020022188	slirp	99	72.727	Oryzias_latipes_hni
ENSPMEG00000019535	slirp	98	73.469	ENSORLG00015020171	slirp	97	73.469	Oryzias_latipes_hsok
ENSPMEG00000019535	slirp	99	74.747	ENSOMEG00000019321	slirp	99	74.747	Oryzias_melastigma
ENSPMEG00000019535	slirp	86	55.814	ENSPPAG00000040710	-	73	61.765	Pan_paniscus
ENSPMEG00000019535	slirp	70	54.286	ENSPPRG00000014350	SLIRP	71	54.286	Panthera_pardus
ENSPMEG00000019535	slirp	70	54.286	ENSPTIG00000014196	SLIRP	71	54.286	Panthera_tigris_altaica
ENSPMEG00000019535	slirp	76	60.526	ENSPTRG00000030691	SLIRP	73	61.765	Pan_troglodytes
ENSPMEG00000019535	slirp	88	53.409	ENSPANG00000026323	SLIRP	72	64.179	Papio_anubis
ENSPMEG00000019535	slirp	66	74.242	ENSPKIG00000008831	slirp	65	74.242	Paramormyrops_kingsleyae
ENSPMEG00000019535	slirp	79	77.215	ENSPMGG00000010541	slirp	91	77.215	Periophthalmus_magnuspinnatus
ENSPMEG00000019535	slirp	72	55.556	ENSPEMG00000013234	Slirp	69	54.286	Peromyscus_maniculatus_bairdii
ENSPMEG00000019535	slirp	85	52.941	ENSPMAG00000009355	slirp	94	52.941	Petromyzon_marinus
ENSPMEG00000019535	slirp	78	50.000	ENSPCIG00000026842	-	84	50.000	Phascolarctos_cinereus
ENSPMEG00000019535	slirp	100	100.000	ENSPFOG00000006758	slirp	100	100.000	Poecilia_formosa
ENSPMEG00000019535	slirp	100	99.000	ENSPLAG00000011140	slirp	100	99.000	Poecilia_latipinna
ENSPMEG00000019535	slirp	100	99.000	ENSPREG00000011673	slirp	100	99.000	Poecilia_reticulata
ENSPMEG00000019535	slirp	74	59.459	ENSPPYG00000006030	SLIRP	69	58.667	Pongo_abelii
ENSPMEG00000019535	slirp	77	58.442	ENSPCOG00000015159	SLIRP	64	61.765	Propithecus_coquereli
ENSPMEG00000019535	slirp	96	71.875	ENSPNAG00000008633	slirp	97	71.875	Pygocentrus_nattereri
ENSPMEG00000019535	slirp	67	62.687	ENSRBIG00000032998	-	62	62.687	Rhinopithecus_bieti
ENSPMEG00000019535	slirp	74	55.405	ENSRBIG00000035817	-	68	55.405	Rhinopithecus_bieti
ENSPMEG00000019535	slirp	65	64.615	ENSRBIG00000031396	-	65	64.615	Rhinopithecus_bieti
ENSPMEG00000019535	slirp	88	56.818	ENSRBIG00000032222	-	81	56.818	Rhinopithecus_bieti
ENSPMEG00000019535	slirp	71	63.380	ENSRROG00000041312	-	70	63.380	Rhinopithecus_roxellana
ENSPMEG00000019535	slirp	67	64.179	ENSRROG00000017133	-	70	64.179	Rhinopithecus_roxellana
ENSPMEG00000019535	slirp	65	63.077	ENSRROG00000035604	-	65	63.077	Rhinopithecus_roxellana
ENSPMEG00000019535	slirp	88	56.818	ENSRROG00000036656	-	81	56.818	Rhinopithecus_roxellana
ENSPMEG00000019535	slirp	83	53.571	ENSSBOG00000020014	SLIRP	72	61.194	Saimiri_boliviensis_boliviensis
ENSPMEG00000019535	slirp	87	68.966	ENSSFOG00015011165	slirp	88	68.966	Scleropages_formosus
ENSPMEG00000019535	slirp	96	56.122	ENSSMAG00000012930	slirp	96	56.122	Scophthalmus_maximus
ENSPMEG00000019535	slirp	98	78.571	ENSSDUG00000021883	slirp	64	78.571	Seriola_dumerili
ENSPMEG00000019535	slirp	98	78.571	ENSSLDG00000023136	slirp	89	78.571	Seriola_lalandi_dorsalis
ENSPMEG00000019535	slirp	91	59.794	ENSSPUG00000009346	SLIRP	99	59.794	Sphenodon_punctatus
ENSPMEG00000019535	slirp	99	67.677	ENSSPAG00000013477	slirp	99	67.677	Stegastes_partitus
ENSPMEG00000019535	slirp	99	45.946	ENSSSCG00000028167	SLIRP	100	45.946	Sus_scrofa
ENSPMEG00000019535	slirp	78	57.692	ENSTGUG00000012337	SLIRP	87	51.087	Taeniopygia_guttata
ENSPMEG00000019535	slirp	98	67.677	ENSTRUG00000020127	slirp	98	67.677	Takifugu_rubripes
ENSPMEG00000019535	slirp	88	57.143	ENSUAMG00000022445	SLIRP	81	57.143	Ursus_americanus
ENSPMEG00000019535	slirp	88	56.044	ENSUMAG00000007166	SLIRP	81	56.044	Ursus_maritimus
ENSPMEG00000019535	slirp	86	49.425	ENSVPAG00000001781	SLIRP	81	49.425	Vicugna_pacos
ENSPMEG00000019535	slirp	77	58.442	ENSVVUG00000004436	SLIRP	82	52.174	Vulpes_vulpes
ENSPMEG00000019535	slirp	81	67.901	ENSXETG00000030343	SLIRP	91	67.901	Xenopus_tropicalis
ENSPMEG00000019535	slirp	99	90.909	ENSXCOG00000009422	slirp	99	90.909	Xiphophorus_couchianus
ENSPMEG00000019535	slirp	99	92.929	ENSXMAG00000015655	slirp	99	92.929	Xiphophorus_maculatus