EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMEG00000019592 (Gene tree)
Gene ID: 106929798
Gene Symbol: POP1
Alias: -
Full Name: POP1 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Minus strand
Length: 17373 bases
Position: chrKQ552150.1:145119-162491
Accession: 106929798
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000016860	POP1	PF06978.11	2.6e-35	1	2
ENSPMEP00000016860	POP1	PF06978.11	2.6e-35	2	2
ENSPMEP00000016860	POPLD	PF08170.12	8.1e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000033561	POP1-201	6260	XM_015006934	ENSPMEP00000016860	957 (aa)	XP_014862420	UPI00072D9E6F

Gene Model

Click here to download ENSPMEG00000019592's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000019592's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000019592	POP1	100	48.223	ENSG00000104356	POP1	100	48.755	Homo_sapiens
ENSPMEG00000019592	POP1	100	74.317	ENSAPOG00000008198	pop1	100	74.317	Acanthochromis_polyacanthus
ENSPMEG00000019592	POP1	100	48.216	ENSAMEG00000000556	POP1	100	48.216	Ailuropoda_melanoleuca
ENSPMEG00000019592	POP1	100	67.919	ENSACIG00000004169	POP1	100	67.411	Amphilophus_citrinellus
ENSPMEG00000019592	POP1	100	73.785	ENSAOCG00000010991	pop1	100	73.785	Amphiprion_ocellaris
ENSPMEG00000019592	POP1	100	67.532	ENSAPEG00000007607	pop1	100	67.133	Amphiprion_percula
ENSPMEG00000019592	POP1	100	70.281	ENSATEG00000024814	POP1	100	70.683	Anabas_testudineus
ENSPMEG00000019592	POP1	94	50.265	ENSAPLG00000014418	POP1	99	50.372	Anas_platyrhynchos
ENSPMEG00000019592	POP1	100	47.099	ENSACAG00000016083	POP1	100	47.104	Anolis_carolinensis
ENSPMEG00000019592	POP1	87	54.518	ENSANAG00000026360	POP1	99	54.518	Aotus_nancymaae
ENSPMEG00000019592	POP1	100	70.707	ENSACLG00000010951	pop1	100	71.010	Astatotilapia_calliptera
ENSPMEG00000019592	POP1	100	55.786	ENSAMXG00000014483	POP1	100	55.786	Astyanax_mexicanus
ENSPMEG00000019592	POP1	100	48.322	ENSBTAG00000012596	POP1	100	48.940	Bos_taurus
ENSPMEG00000019592	POP1	100	48.166	ENSCJAG00000015567	POP1	100	48.740	Callithrix_jacchus
ENSPMEG00000019592	POP1	100	49.452	ENSCAFG00000000469	POP1	100	49.452	Canis_familiaris
ENSPMEG00000019592	POP1	100	48.299	ENSCAFG00020026765	POP1	100	48.299	Canis_lupus_dingo
ENSPMEG00000019592	POP1	94	52.725	ENSCHIG00000017066	POP1	100	48.701	Capra_hircus
ENSPMEG00000019592	POP1	100	47.692	ENSTSYG00000003097	POP1	100	47.692	Carlito_syrichta
ENSPMEG00000019592	POP1	100	46.391	ENSCAPG00000007251	POP1	100	46.583	Cavia_aperea
ENSPMEG00000019592	POP1	100	47.343	ENSCPOG00000002901	POP1	100	47.343	Cavia_porcellus
ENSPMEG00000019592	POP1	100	48.934	ENSCCAG00000018939	POP1	100	49.128	Cebus_capucinus
ENSPMEG00000019592	POP1	100	48.851	ENSCATG00000040916	POP1	100	48.851	Cercocebus_atys
ENSPMEG00000019592	POP1	100	47.308	ENSCLAG00000007208	POP1	97	47.729	Chinchilla_lanigera
ENSPMEG00000019592	POP1	91	50.266	ENSCSAG00000012340	POP1	98	50.215	Chlorocebus_sabaeus
ENSPMEG00000019592	POP1	93	47.451	ENSCHOG00000011432	POP1	96	47.555	Choloepus_hoffmanni
ENSPMEG00000019592	POP1	100	49.705	ENSCPBG00000006373	POP1	100	50.392	Chrysemys_picta_bellii
ENSPMEG00000019592	POP1	89	31.325	ENSCING00000008323	-	96	31.024	Ciona_intestinalis
ENSPMEG00000019592	POP1	100	48.993	ENSCANG00000001647	POP1	100	48.993	Colobus_angolensis_palliatus
ENSPMEG00000019592	POP1	100	46.236	ENSCGRG00001017308	Pop1	100	46.429	Cricetulus_griseus_chok1gshd
ENSPMEG00000019592	POP1	100	43.854	ENSCGRG00000010824	Pop1	100	44.106	Cricetulus_griseus_crigri
ENSPMEG00000019592	POP1	100	67.003	ENSCSEG00000008737	POP1	100	67.003	Cynoglossus_semilaevis
ENSPMEG00000019592	POP1	100	78.029	ENSCVAG00000022248	pop1	100	78.029	Cyprinodon_variegatus
ENSPMEG00000019592	POP1	53	53.649	ENSDARG00000102087	pop1	98	53.846	Danio_rerio
ENSPMEG00000019592	POP1	100	45.480	ENSDNOG00000019974	POP1	100	45.506	Dasypus_novemcinctus
ENSPMEG00000019592	POP1	100	42.456	ENSDORG00000015384	Pop1	100	42.663	Dipodomys_ordii
ENSPMEG00000019592	POP1	88	46.459	ENSETEG00000007839	POP1	88	46.459	Echinops_telfairi
ENSPMEG00000019592	POP1	53	42.383	ENSEBUG00000009897	pop1	96	42.383	Eptatretus_burgeri
ENSPMEG00000019592	POP1	100	47.830	ENSEASG00005003189	POP1	98	48.450	Equus_asinus_asinus
ENSPMEG00000019592	POP1	100	48.450	ENSECAG00000024236	POP1	100	48.643	Equus_caballus
ENSPMEG00000019592	POP1	51	69.512	ENSEEUG00000003050	-	53	78.788	Erinaceus_europaeus
ENSPMEG00000019592	POP1	100	61.202	ENSELUG00000003526	pop1	100	61.609	Esox_lucius
ENSPMEG00000019592	POP1	100	48.015	ENSFCAG00000002168	POP1	100	48.015	Felis_catus
ENSPMEG00000019592	POP1	100	47.144	ENSFALG00000005711	POP1	100	47.348	Ficedula_albicollis
ENSPMEG00000019592	POP1	100	47.115	ENSFDAG00000017068	POP1	100	47.308	Fukomys_damarensis
ENSPMEG00000019592	POP1	100	78.119	ENSFHEG00000019518	pop1	100	78.119	Fundulus_heteroclitus
ENSPMEG00000019592	POP1	100	59.536	ENSGMOG00000000659	POP1	100	59.031	Gadus_morhua
ENSPMEG00000019592	POP1	100	92.708	ENSGAFG00000019770	POP1	100	92.708	Gambusia_affinis
ENSPMEG00000019592	POP1	100	63.419	ENSGACG00000003499	pop1	92	70.135	Gasterosteus_aculeatus
ENSPMEG00000019592	POP1	100	48.835	ENSGAGG00000011737	POP1	98	49.319	Gopherus_agassizii
ENSPMEG00000019592	POP1	100	48.365	ENSGGOG00000003176	POP1	100	48.755	Gorilla_gorilla
ENSPMEG00000019592	POP1	100	71.010	ENSHBUG00000021583	pop1	100	71.414	Haplochromis_burtoni
ENSPMEG00000019592	POP1	100	46.660	ENSHGLG00000006029	POP1	100	47.076	Heterocephalus_glaber_female
ENSPMEG00000019592	POP1	100	46.660	ENSHGLG00100016879	POP1	100	47.076	Heterocephalus_glaber_male
ENSPMEG00000019592	POP1	100	61.623	ENSHCOG00000013888	pop1	100	61.222	Hippocampus_comes
ENSPMEG00000019592	POP1	99	56.098	ENSIPUG00000018336	pop1	100	56.043	Ictalurus_punctatus
ENSPMEG00000019592	POP1	100	47.155	ENSSTOG00000011455	POP1	97	47.155	Ictidomys_tridecemlineatus
ENSPMEG00000019592	POP1	100	46.700	ENSJJAG00000013325	Pop1	100	46.700	Jaculus_jaculus
ENSPMEG00000019592	POP1	100	74.025	ENSKMAG00000001346	POP1	100	74.025	Kryptolebias_marmoratus
ENSPMEG00000019592	POP1	100	64.344	ENSLBEG00000024457	POP1	100	64.139	Labrus_bergylta
ENSPMEG00000019592	POP1	94	50.726	ENSLACG00000012498	POP1	98	51.187	Latimeria_chalumnae
ENSPMEG00000019592	POP1	100	55.371	ENSLOCG00000009817	POP1	100	56.146	Lepisosteus_oculatus
ENSPMEG00000019592	POP1	100	48.092	ENSLAFG00000010770	POP1	100	48.424	Loxodonta_africana
ENSPMEG00000019592	POP1	100	47.901	ENSMFAG00000000347	POP1	100	48.755	Macaca_fascicularis
ENSPMEG00000019592	POP1	100	48.141	ENSMNEG00000036870	POP1	100	48.659	Macaca_nemestrina
ENSPMEG00000019592	POP1	100	48.427	ENSMLEG00000034986	POP1	100	48.946	Mandrillus_leucophaeus
ENSPMEG00000019592	POP1	100	69.433	ENSMAMG00000004040	pop1	100	68.927	Mastacembelus_armatus
ENSPMEG00000019592	POP1	100	70.808	ENSMZEG00005025448	pop1	100	71.212	Maylandia_zebra
ENSPMEG00000019592	POP1	100	46.839	ENSMGAG00000012167	POP1	100	46.997	Meleagris_gallopavo
ENSPMEG00000019592	POP1	100	46.842	ENSMAUG00000017537	Pop1	100	46.842	Mesocricetus_auratus
ENSPMEG00000019592	POP1	100	47.550	ENSMICG00000004361	POP1	100	47.550	Microcebus_murinus
ENSPMEG00000019592	POP1	100	46.997	ENSMOCG00000006356	Pop1	100	46.667	Microtus_ochrogaster
ENSPMEG00000019592	POP1	100	63.477	ENSMMOG00000018242	pop1	100	63.477	Mola_mola
ENSPMEG00000019592	POP1	100	45.594	ENSMODG00000006561	POP1	100	46.029	Monodelphis_domestica
ENSPMEG00000019592	POP1	100	68.844	ENSMALG00000012621	POP1	100	69.045	Monopterus_albus
ENSPMEG00000019592	POP1	100	45.213	MGP_CAROLIEiJ_G0019726	Pop1	100	45.619	Mus_caroli
ENSPMEG00000019592	POP1	100	45.170	ENSMUSG00000022325	Pop1	100	45.480	Mus_musculus
ENSPMEG00000019592	POP1	100	45.038	MGP_PahariEiJ_G0019735	Pop1	100	45.446	Mus_pahari
ENSPMEG00000019592	POP1	100	45.281	MGP_SPRETEiJ_G0020622	Pop1	100	45.690	Mus_spretus
ENSPMEG00000019592	POP1	100	48.599	ENSMPUG00000015250	POP1	100	48.599	Mustela_putorius_furo
ENSPMEG00000019592	POP1	100	46.346	ENSMLUG00000010204	POP1	100	46.500	Myotis_lucifugus
ENSPMEG00000019592	POP1	100	46.571	ENSNGAG00000001582	Pop1	100	46.890	Nannospalax_galili
ENSPMEG00000019592	POP1	100	65.271	ENSNBRG00000002356	pop1	100	65.679	Neolamprologus_brichardi
ENSPMEG00000019592	POP1	100	49.138	ENSNLEG00000002541	POP1	100	49.138	Nomascus_leucogenys
ENSPMEG00000019592	POP1	87	54.438	ENSMEUG00000003118	POP1	90	54.438	Notamacropus_eugenii
ENSPMEG00000019592	POP1	100	47.707	ENSOPRG00000007667	POP1	100	47.707	Ochotona_princeps
ENSPMEG00000019592	POP1	100	46.884	ENSODEG00000003984	POP1	100	46.968	Octodon_degus
ENSPMEG00000019592	POP1	100	71.010	ENSONIG00000016445	pop1	100	71.443	Oreochromis_niloticus
ENSPMEG00000019592	POP1	61	45.924	ENSOANG00000001278	-	94	45.924	Ornithorhynchus_anatinus
ENSPMEG00000019592	POP1	100	47.166	ENSOCUG00000017400	POP1	100	47.166	Oryctolagus_cuniculus
ENSPMEG00000019592	POP1	100	69.959	ENSORLG00000002839	pop1	100	70.576	Oryzias_latipes
ENSPMEG00000019592	POP1	92	68.162	ENSORLG00020022450	POP1	95	68.076	Oryzias_latipes_hni
ENSPMEG00000019592	POP1	100	69.713	ENSORLG00015012746	POP1	100	70.329	Oryzias_latipes_hsok
ENSPMEG00000019592	POP1	100	68.744	ENSOMEG00000006915	pop1	99	69.159	Oryzias_melastigma
ENSPMEG00000019592	POP1	100	46.782	ENSOGAG00000001466	POP1	100	47.394	Otolemur_garnettii
ENSPMEG00000019592	POP1	100	48.319	ENSPPAG00000018410	POP1	100	48.851	Pan_paniscus
ENSPMEG00000019592	POP1	100	47.826	ENSPPRG00000005002	POP1	100	48.166	Panthera_pardus
ENSPMEG00000019592	POP1	100	47.826	ENSPTIG00000016527	POP1	100	47.826	Panthera_tigris_altaica
ENSPMEG00000019592	POP1	100	48.319	ENSPTRG00000020458	POP1	100	48.851	Pan_troglodytes
ENSPMEG00000019592	POP1	100	48.522	ENSPANG00000009704	POP1	100	49.042	Papio_anubis
ENSPMEG00000019592	POP1	100	59.448	ENSPKIG00000016325	POP1	100	59.346	Paramormyrops_kingsleyae
ENSPMEG00000019592	POP1	100	48.942	ENSPSIG00000012343	POP1	100	49.422	Pelodiscus_sinensis
ENSPMEG00000019592	POP1	100	62.287	ENSPMGG00000022253	POP1	100	62.187	Periophthalmus_magnuspinnatus
ENSPMEG00000019592	POP1	99	46.198	ENSPEMG00000023633	Pop1	100	46.198	Peromyscus_maniculatus_bairdii
ENSPMEG00000019592	POP1	91	43.442	ENSPMAG00000003209	POP1	99	43.823	Petromyzon_marinus
ENSPMEG00000019592	POP1	100	46.050	ENSPCIG00000012216	POP1	100	46.050	Phascolarctos_cinereus
ENSPMEG00000019592	POP1	100	98.958	ENSPFOG00000012490	POP1	100	98.958	Poecilia_formosa
ENSPMEG00000019592	POP1	100	97.917	ENSPLAG00000004646	POP1	100	97.917	Poecilia_latipinna
ENSPMEG00000019592	POP1	100	95.634	ENSPREG00000020951	POP1	100	95.634	Poecilia_reticulata
ENSPMEG00000019592	POP1	100	48.755	ENSPPYG00000018777	POP1	100	48.851	Pongo_abelii
ENSPMEG00000019592	POP1	100	45.873	ENSPCAG00000016662	POP1	100	45.785	Procavia_capensis
ENSPMEG00000019592	POP1	100	47.166	ENSPCOG00000019420	POP1	100	47.166	Propithecus_coquereli
ENSPMEG00000019592	POP1	100	46.957	ENSPVAG00000014468	POP1	100	47.642	Pteropus_vampyrus
ENSPMEG00000019592	POP1	100	66.735	ENSPNYG00000004476	pop1	100	66.155	Pundamilia_nyererei
ENSPMEG00000019592	POP1	100	55.490	ENSPNAG00000000265	pop1	100	55.490	Pygocentrus_nattereri
ENSPMEG00000019592	POP1	100	46.000	ENSRNOG00000005243	Pop1	100	46.190	Rattus_norvegicus
ENSPMEG00000019592	POP1	100	49.138	ENSRBIG00000007996	POP1	100	49.138	Rhinopithecus_bieti
ENSPMEG00000019592	POP1	100	49.138	ENSRROG00000012334	POP1	100	49.138	Rhinopithecus_roxellana
ENSPMEG00000019592	POP1	99	48.155	ENSSBOG00000020830	POP1	100	48.350	Saimiri_boliviensis_boliviensis
ENSPMEG00000019592	POP1	100	45.777	ENSSHAG00000000296	POP1	100	45.777	Sarcophilus_harrisii
ENSPMEG00000019592	POP1	100	59.551	ENSSFOG00015007429	pop1	99	59.551	Scleropages_formosus
ENSPMEG00000019592	POP1	100	67.864	ENSSMAG00000010467	POP1	100	68.378	Scophthalmus_maximus
ENSPMEG00000019592	POP1	100	71.227	ENSSDUG00000007817	POP1	100	71.429	Seriola_dumerili
ENSPMEG00000019592	POP1	100	71.328	ENSSLDG00000012565	POP1	100	71.529	Seriola_lalandi_dorsalis
ENSPMEG00000019592	POP1	100	46.109	ENSSPUG00000003550	-	100	46.505	Sphenodon_punctatus
ENSPMEG00000019592	POP1	100	70.642	ENSSPAG00000014955	pop1	100	69.623	Stegastes_partitus
ENSPMEG00000019592	POP1	100	47.750	ENSSSCG00000006078	POP1	100	47.750	Sus_scrofa
ENSPMEG00000019592	POP1	94	44.690	ENSTGUG00000012011	-	100	44.900	Taeniopygia_guttata
ENSPMEG00000019592	POP1	100	65.779	ENSTRUG00000010856	pop1	100	65.779	Takifugu_rubripes
ENSPMEG00000019592	POP1	95	67.471	ENSTNIG00000013297	pop1	100	67.471	Tetraodon_nigroviridis
ENSPMEG00000019592	POP1	93	47.009	ENSTBEG00000014214	POP1	96	47.009	Tupaia_belangeri
ENSPMEG00000019592	POP1	100	46.280	ENSTTRG00000016071	POP1	100	46.184	Tursiops_truncatus
ENSPMEG00000019592	POP1	99	48.410	ENSUAMG00000017309	POP1	100	48.410	Ursus_americanus
ENSPMEG00000019592	POP1	100	47.714	ENSUMAG00000016952	POP1	100	51.711	Ursus_maritimus
ENSPMEG00000019592	POP1	85	53.309	ENSVPAG00000008278	POP1	81	53.309	Vicugna_pacos
ENSPMEG00000019592	POP1	100	48.105	ENSVVUG00000010994	POP1	100	48.105	Vulpes_vulpes
ENSPMEG00000019592	POP1	100	80.163	ENSXCOG00000017043	POP1	100	79.451	Xiphophorus_couchianus
ENSPMEG00000019592	POP1	100	91.458	ENSXMAG00000002472	POP1	100	91.458	Xiphophorus_maculatus