EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPMEG00000019739 (Gene tree)
Gene ID
106907762
Gene Symbol
pabpc4
Alias
-
Full Name
poly(A) binding protein cytoplasmic 4
Gene Type
protein_coding
Species
Poecilia_mexicana
Status
putative
Strand
Minus strand
Length
10843 bases
Position
chrLMXC01026739.1:27188-38030
Accession
106907762
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPMEP00000016987PABPPF00658.186.5e-3111
ENSPMEP00000016992PABPPF00658.186.5e-3111
ENSPMEP00000016987RRM_5PF13893.61.6e-0911
ENSPMEP00000016992RRM_5PF13893.61.6e-0911
ENSPMEP00000016987RRM_1PF00076.221.5e-9014
ENSPMEP00000016987RRM_1PF00076.221.5e-9024
ENSPMEP00000016987RRM_1PF00076.221.5e-9034
ENSPMEP00000016987RRM_1PF00076.221.5e-9044
ENSPMEP00000016992RRM_1PF00076.221.5e-9014
ENSPMEP00000016992RRM_1PF00076.221.5e-9024
ENSPMEP00000016992RRM_1PF00076.221.5e-9034
ENSPMEP00000016992RRM_1PF00076.221.5e-9044
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPMET00000025718-2652XM_014973610ENSPMEP00000016992626 (aa)XP_014829096UPI00072ED267
ENSPMET00000025708-2577XM_014973611ENSPMEP00000016987626 (aa)XP_014829097UPI00072ED267
Gene Model
Click here to download ENSPMEG00000019739's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000019739's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPMEG00000019739pabpc49877.266ENSPMEG00000001334pabpc1a9876.592
ENSPMEG00000019739pabpc46036.145ENSPMEG00000021929ELAVL28531.333
ENSPMEG00000019739pabpc49876.153ENSPMEG00000014399pabpc1b9976.312
ENSPMEG00000019739pabpc46532.000ENSPMEG00000018585rbm196832.000
ENSPMEG00000019739pabpc45338.636ENSPMEG00000013036-5838.636
ENSPMEG00000019739pabpc45930.168ENSPMEG00000012743trnau1apb5430.168
ENSPMEG00000019739pabpc49868.051ENSPMEG00000007677pabpc1l10065.728
ENSPMEG00000019739pabpc46283.846ENSPMEG00000009185-8983.846
ENSPMEG00000019739pabpc45832.450ENSPMEG00000000283ELAVL19931.522
ENSPMEG00000019739pabpc45934.940ENSPMEG00000015619elavl47834.940
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPMEG00000019739pabpc410085.167ENSG00000090621PABPC410094.574Homo_sapiens
ENSPMEG00000019739pabpc49995.955ENSAPOG00000001161pabpc49896.266Acanthochromis_polyacanthus
ENSPMEG00000019739pabpc49849.759ENSAMEG00000015083-9848.867Ailuropoda_melanoleuca
ENSPMEG00000019739pabpc410079.940ENSAMEG00000011535-9979.635Ailuropoda_melanoleuca
ENSPMEG00000019739pabpc410095.087ENSACIG00000023343pabpc49995.087Amphilophus_citrinellus
ENSPMEG00000019739pabpc49995.793ENSAOCG00000021529pabpc49895.942Amphiprion_ocellaris
ENSPMEG00000019739pabpc49995.793ENSAPEG00000019196pabpc49895.942Amphiprion_percula
ENSPMEG00000019739pabpc49995.153ENSATEG00000007402pabpc49895.300Anabas_testudineus
ENSPMEG00000019739pabpc49985.512ENSAPLG00000009729-9984.897Anas_platyrhynchos
ENSPMEG00000019739pabpc49885.106ENSACAG00000002544PABPC49984.409Anolis_carolinensis
ENSPMEG00000019739pabpc410082.919ENSANAG00000025079PABPC49983.148Aotus_nancymaae
ENSPMEG00000019739pabpc410095.847ENSACLG00000019558pabpc49995.847Astatotilapia_calliptera
ENSPMEG00000019739pabpc49986.212ENSAMXG00000018779pabpc49886.174Astyanax_mexicanus
ENSPMEG00000019739pabpc410081.707ENSBTAG00000017125PABPC49981.366Bos_taurus
ENSPMEG00000019739pabpc45883.832ENSBTAG00000048536-9383.832Bos_taurus
ENSPMEG00000019739pabpc47974.219ENSCJAG00000045953-9772.656Callithrix_jacchus
ENSPMEG00000019739pabpc410082.919ENSCJAG00000002512-9982.989Callithrix_jacchus
ENSPMEG00000019739pabpc410084.194ENSCAFG00000003081PABPC49983.466Canis_familiaris
ENSPMEG00000019739pabpc410080.090ENSCAFG00020004161PABPC49979.787Canis_lupus_dingo
ENSPMEG00000019739pabpc410065.224ENSCHIG00000023385-9964.521Capra_hircus
ENSPMEG00000019739pabpc410079.940ENSCHIG00000019398-9979.483Capra_hircus
ENSPMEG00000019739pabpc410083.881ENSTSYG00000006532PABPC49983.148Carlito_syrichta
ENSPMEG00000019739pabpc49983.387ENSCAPG00000015984PABPC49983.067Cavia_aperea
ENSPMEG00000019739pabpc410083.573ENSCPOG00000009552PABPC49983.307Cavia_porcellus
ENSPMEG00000019739pabpc410082.919ENSCCAG00000037306PABPC49983.307Cebus_capucinus
ENSPMEG00000019739pabpc410083.075ENSCATG00000042164PABPC49983.307Cercocebus_atys
ENSPMEG00000019739pabpc410083.230ENSCLAG00000011899PABPC49983.307Chinchilla_lanigera
ENSPMEG00000019739pabpc410080.090ENSCSAG00000001135PABPC49979.635Chlorocebus_sabaeus
ENSPMEG00000019739pabpc48789.211ENSCHOG00000005327PABPC47889.757Choloepus_hoffmanni
ENSPMEG00000019739pabpc49986.142ENSCPBG00000001038PABPC49985.533Chrysemys_picta_bellii
ENSPMEG00000019739pabpc49983.307ENSCANG00000034177PABPC49983.548Colobus_angolensis_palliatus
ENSPMEG00000019739pabpc49885.041ENSCGRG00001018166Pabpc49884.117Cricetulus_griseus_chok1gshd
ENSPMEG00000019739pabpc49785.314ENSCGRG00000009777Pabpc49884.375Cricetulus_griseus_crigri
ENSPMEG00000019739pabpc410094.896ENSCSEG00000000130pabpc49895.455Cynoglossus_semilaevis
ENSPMEG00000019739pabpc49998.377ENSCVAG00000019246pabpc410098.377Cyprinodon_variegatus
ENSPMEG00000019739pabpc49892.185ENSDARG00000059259pabpc410091.901Danio_rerio
ENSPMEG00000019739pabpc49982.024ENSDNOG00000018444-9982.258Dasypus_novemcinctus
ENSPMEG00000019739pabpc410082.137ENSDORG00000011581Pabpc49981.493Dipodomys_ordii
ENSPMEG00000019739pabpc48554.679ENSETEG00000009172-9953.211Echinops_telfairi
ENSPMEG00000019739pabpc410090.625ENSETEG00000018453-8390.625Echinops_telfairi
ENSPMEG00000019739pabpc49976.274ENSEBUG00000000992pabpc49975.719Eptatretus_burgeri
ENSPMEG00000019739pabpc49777.724ENSEBUG00000013782pabpc49977.404Eptatretus_burgeri
ENSPMEG00000019739pabpc410080.090ENSEASG00005014119PABPC49979.635Equus_asinus_asinus
ENSPMEG00000019739pabpc410080.090ENSECAG00000009396PABPC49979.635Equus_caballus
ENSPMEG00000019739pabpc49778.528ENSEEUG00000002962PABPC49977.964Erinaceus_europaeus
ENSPMEG00000019739pabpc49892.516ENSELUG00000003195pabpc49892.516Esox_lucius
ENSPMEG00000019739pabpc410084.194ENSFCAG00000015254-9983.466Felis_catus
ENSPMEG00000019739pabpc49985.669ENSFALG00000000543PABPC49985.056Ficedula_albicollis
ENSPMEG00000019739pabpc48953.040ENSFDAG00000010581-9950.607Fukomys_damarensis
ENSPMEG00000019739pabpc410080.240ENSFDAG00000020016-9979.483Fukomys_damarensis
ENSPMEG00000019739pabpc410098.722ENSFHEG00000007548pabpc410098.722Fundulus_heteroclitus
ENSPMEG00000019739pabpc410090.424ENSGMOG00000019025pabpc49891.069Gadus_morhua
ENSPMEG00000019739pabpc49986.299ENSGALG00000003800PABPC49985.692Gallus_gallus
ENSPMEG00000019739pabpc410097.615ENSGAFG00000018195pabpc410097.615Gambusia_affinis
ENSPMEG00000019739pabpc410092.971ENSGACG00000007179pabpc49893.669Gasterosteus_aculeatus
ENSPMEG00000019739pabpc49986.299ENSGAGG00000001888PABPC49985.692Gopherus_agassizii
ENSPMEG00000019739pabpc410082.919ENSGGOG00000004002PABPC49983.148Gorilla_gorilla
ENSPMEG00000019739pabpc410095.687ENSHBUG00000020206pabpc49896.429Haplochromis_burtoni
ENSPMEG00000019739pabpc410083.230ENSHGLG00000011162PABPC49983.148Heterocephalus_glaber_female
ENSPMEG00000019739pabpc410083.230ENSHGLG00100001580PABPC49983.148Heterocephalus_glaber_male
ENSPMEG00000019739pabpc410093.770ENSHCOG00000012694pabpc49895.292Hippocampus_comes
ENSPMEG00000019739pabpc49791.613ENSIPUG00000016620pabpc49991.534Ictalurus_punctatus
ENSPMEG00000019739pabpc410085.167ENSSTOG00000010416PABPC49984.441Ictidomys_tridecemlineatus
ENSPMEG00000019739pabpc410080.734ENSJJAG00000007781Pabpc49980.249Jaculus_jaculus
ENSPMEG00000019739pabpc410095.056ENSKMAG00000013597pabpc410095.056Kryptolebias_marmoratus
ENSPMEG00000019739pabpc410094.127ENSLBEG00000013654pabpc49894.822Labrus_bergylta
ENSPMEG00000019739pabpc49986.950ENSLACG00000011907PABPC49986.963Latimeria_chalumnae
ENSPMEG00000019739pabpc49991.339ENSLOCG00000001877pabpc49992.026Lepisosteus_oculatus
ENSPMEG00000019739pabpc410085.327ENSLAFG00000000151PABPC49984.603Loxodonta_africana
ENSPMEG00000019739pabpc410083.075ENSMFAG00000041481PABPC49983.307Macaca_fascicularis
ENSPMEG00000019739pabpc410080.090ENSMMUG00000007497PABPC49979.635Macaca_mulatta
ENSPMEG00000019739pabpc410083.075ENSMNEG00000043054PABPC49983.307Macaca_nemestrina
ENSPMEG00000019739pabpc410083.075ENSMLEG00000040716PABPC49983.307Mandrillus_leucophaeus
ENSPMEG00000019739pabpc49995.955ENSMAMG00000010025pabpc49896.104Mastacembelus_armatus
ENSPMEG00000019739pabpc410095.687ENSMZEG00005006141pabpc49896.429Maylandia_zebra
ENSPMEG00000019739pabpc49882.770ENSMGAG00000005408PABPC49982.082Meleagris_gallopavo
ENSPMEG00000019739pabpc45879.532ENSMAUG00000004089-9279.532Mesocricetus_auratus
ENSPMEG00000019739pabpc47279.524ENSMAUG00000001295-9778.571Mesocricetus_auratus
ENSPMEG00000019739pabpc47790.625ENSMAUG00000019763-8192.632Mesocricetus_auratus
ENSPMEG00000019739pabpc48884.685ENSMICG00000016633-10083.784Microcebus_murinus
ENSPMEG00000019739pabpc49975.492ENSMICG00000036729-9974.317Microcebus_murinus
ENSPMEG00000019739pabpc49884.168ENSMOCG00000006763Pabpc49883.148Microtus_ochrogaster
ENSPMEG00000019739pabpc410091.214ENSMMOG00000002363pabpc49891.558Mola_mola
ENSPMEG00000019739pabpc46071.467ENSMODG00000018051-9671.467Monodelphis_domestica
ENSPMEG00000019739pabpc49783.513ENSMODG00000017657-9982.290Monodelphis_domestica
ENSPMEG00000019739pabpc49995.645ENSMALG00000011017pabpc49895.146Monopterus_albus
ENSPMEG00000019739pabpc410079.641MGP_CAROLIEiJ_G0026435-10095.745Mus_caroli
ENSPMEG00000019739pabpc49973.077MGP_CAROLIEiJ_G0024864-9973.466Mus_caroli
ENSPMEG00000019739pabpc410085.008ENSMUSG00000011257Pabpc410094.048Mus_musculus
ENSPMEG00000019739pabpc49980.121MGP_PahariEiJ_G0028765Pabpc410096.454Mus_pahari
ENSPMEG00000019739pabpc49970.588MGP_SPRETEiJ_G0027415Pabpc410096.454Mus_spretus
ENSPMEG00000019739pabpc49546.293ENSMPUG00000006836-10045.545Mustela_putorius_furo
ENSPMEG00000019739pabpc410080.090ENSMPUG00000014414-9979.787Mustela_putorius_furo
ENSPMEG00000019739pabpc410085.008ENSMLUG00000012068PABPC49984.441Myotis_lucifugus
ENSPMEG00000019739pabpc410085.327ENSNGAG00000018292Pabpc49984.603Nannospalax_galili
ENSPMEG00000019739pabpc46598.795ENSNBRG00000010047-7298.795Neolamprologus_brichardi
ENSPMEG00000019739pabpc46098.077ENSNBRG00000009708pabpc49898.077Neolamprologus_brichardi
ENSPMEG00000019739pabpc410083.075ENSNLEG00000011928PABPC49983.307Nomascus_leucogenys
ENSPMEG00000019739pabpc48593.651ENSOPRG00000011984PABPC48693.651Ochotona_princeps
ENSPMEG00000019739pabpc49974.066ENSODEG00000017434-9972.881Octodon_degus
ENSPMEG00000019739pabpc410083.075ENSODEG00000006592-9982.671Octodon_degus
ENSPMEG00000019739pabpc45382.143ENSODEG00000013457-10082.143Octodon_degus
ENSPMEG00000019739pabpc410095.847ENSONIG00000008176pabpc49995.847Oreochromis_niloticus
ENSPMEG00000019739pabpc49986.299ENSOANG00000010001PABPC49985.851Ornithorhynchus_anatinus
ENSPMEG00000019739pabpc49580.220ENSOCUG00000000562PABPC48879.435Oryctolagus_cuniculus
ENSPMEG00000019739pabpc49997.531ENSORLG00000017479pabpc49797.531Oryzias_latipes
ENSPMEG00000019739pabpc49997.531ENSORLG00020018644pabpc49797.531Oryzias_latipes_hni
ENSPMEG00000019739pabpc49997.531ENSORLG00015015042pabpc49797.531Oryzias_latipes_hsok
ENSPMEG00000019739pabpc49995.793ENSOMEG00000014410pabpc49896.098Oryzias_melastigma
ENSPMEG00000019739pabpc410081.555ENSOGAG00000004067PABPC49981.269Otolemur_garnettii
ENSPMEG00000019739pabpc410079.940ENSOARG00000020060PABPC49979.483Ovis_aries
ENSPMEG00000019739pabpc410082.919ENSPPAG00000043625PABPC49983.148Pan_paniscus
ENSPMEG00000019739pabpc410084.194ENSPPRG00000024727PABPC49983.466Panthera_pardus
ENSPMEG00000019739pabpc410084.194ENSPTIG00000005829PABPC49983.466Panthera_tigris_altaica
ENSPMEG00000019739pabpc410082.919ENSPTRG00000000573PABPC49983.148Pan_troglodytes
ENSPMEG00000019739pabpc410083.075ENSPANG00000009484PABPC49983.307Papio_anubis
ENSPMEG00000019739pabpc49990.236ENSPKIG00000025356pabpc49990.492Paramormyrops_kingsleyae
ENSPMEG00000019739pabpc49986.614ENSPSIG00000016892PABPC49986.010Pelodiscus_sinensis
ENSPMEG00000019739pabpc410090.575ENSPMGG00000009073pabpc49890.584Periophthalmus_magnuspinnatus
ENSPMEG00000019739pabpc410079.938ENSPEMG00000024193-9979.621Peromyscus_maniculatus_bairdii
ENSPMEG00000019739pabpc410082.298ENSPEMG00000023569-9982.671Peromyscus_maniculatus_bairdii
ENSPMEG00000019739pabpc48874.913ENSPMAG00000002836pabpc410075.784Petromyzon_marinus
ENSPMEG00000019739pabpc49873.265ENSPMAG00000007885pabpc49973.045Petromyzon_marinus
ENSPMEG00000019739pabpc49787.480ENSPCIG00000020674PABPC49795.146Phascolarctos_cinereus
ENSPMEG00000019739pabpc410099.681ENSPFOG00000002682pabpc410099.681Poecilia_formosa
ENSPMEG00000019739pabpc410099.521ENSPLAG00000010112pabpc410099.521Poecilia_latipinna
ENSPMEG00000019739pabpc410099.042ENSPREG00000001589pabpc410099.042Poecilia_reticulata
ENSPMEG00000019739pabpc410079.940ENSPPYG00000001506PABPC49979.483Pongo_abelii
ENSPMEG00000019739pabpc410075.299ENSPCAG00000003341PABPC49974.772Procavia_capensis
ENSPMEG00000019739pabpc49968.772ENSPCOG00000025882-9486.170Propithecus_coquereli
ENSPMEG00000019739pabpc410082.946ENSPCOG00000023725-9983.175Propithecus_coquereli
ENSPMEG00000019739pabpc49879.270ENSPVAG00000002187PABPC49978.415Pteropus_vampyrus
ENSPMEG00000019739pabpc410095.847ENSPNYG00000006134pabpc49995.847Pundamilia_nyererei
ENSPMEG00000019739pabpc49993.027ENSPNAG00000024355pabpc49993.730Pygocentrus_nattereri
ENSPMEG00000019739pabpc410081.832ENSRNOG00000015642Pabpc49981.182Rattus_norvegicus
ENSPMEG00000019739pabpc410079.695ENSRNOG00000028592AABR07035074.19979.005Rattus_norvegicus
ENSPMEG00000019739pabpc410083.075ENSRBIG00000039761PABPC49983.307Rhinopithecus_bieti
ENSPMEG00000019739pabpc410083.075ENSRROG00000033355PABPC49983.307Rhinopithecus_roxellana
ENSPMEG00000019739pabpc410082.919ENSSBOG00000026193PABPC49983.307Saimiri_boliviensis_boliviensis
ENSPMEG00000019739pabpc49787.319ENSSHAG00000018139PABPC49986.010Sarcophilus_harrisii
ENSPMEG00000019739pabpc49990.196ENSSFOG00015023514pabpc49891.015Scleropages_formosus
ENSPMEG00000019739pabpc410094.737ENSSMAG00000009007pabpc49895.447Scophthalmus_maximus
ENSPMEG00000019739pabpc49995.955ENSSDUG00000012683pabpc49896.104Seriola_dumerili
ENSPMEG00000019739pabpc49995.955ENSSLDG00000013025pabpc49896.104Seriola_lalandi_dorsalis
ENSPMEG00000019739pabpc410073.802ENSSARG00000000310PABPC49973.100Sorex_araneus
ENSPMEG00000019739pabpc49986.804ENSSPUG00000003204PABPC49986.196Sphenodon_punctatus
ENSPMEG00000019739pabpc49995.955ENSSPAG00000009252pabpc49896.266Stegastes_partitus
ENSPMEG00000019739pabpc48843.915ENSSSCG00000036170-9444.444Sus_scrofa
ENSPMEG00000019739pabpc410083.075ENSSSCG00000003660-9983.307Sus_scrofa
ENSPMEG00000019739pabpc49981.381ENSTGUG00000001266PABPC49981.639Taeniopygia_guttata
ENSPMEG00000019739pabpc410093.610ENSTRUG00000005907pabpc49894.643Takifugu_rubripes
ENSPMEG00000019739pabpc410086.581ENSTNIG00000016902pabpc49887.500Tetraodon_nigroviridis
ENSPMEG00000019739pabpc49969.154ENSTBEG00000009035PABPC49968.297Tupaia_belangeri
ENSPMEG00000019739pabpc49959.825ENSTTRG00000014340PABPC49967.622Tursiops_truncatus
ENSPMEG00000019739pabpc410084.194ENSUAMG00000000303PABPC49983.466Ursus_americanus
ENSPMEG00000019739pabpc410087.330ENSUMAG00000019585PABPC49992.632Ursus_maritimus
ENSPMEG00000019739pabpc47870.206ENSVPAG00000010041PABPC47270.206Vicugna_pacos
ENSPMEG00000019739pabpc410084.194ENSVVUG00000005215PABPC49983.466Vulpes_vulpes
ENSPMEG00000019739pabpc49982.520ENSXETG00000010946pabpc49981.717Xenopus_tropicalis
ENSPMEG00000019739pabpc46895.833ENSXETG00000027221-10095.833Xenopus_tropicalis
ENSPMEG00000019739pabpc49995.782ENSXCOG00000013190pabpc49698.585Xiphophorus_couchianus
ENSPMEG00000019739pabpc410099.201ENSXMAG00000019007pabpc410099.201Xiphophorus_maculatus

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