EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMEG00000019947 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Plus strand
Length: 4128 bases
Position: chrKQ551115.1:237787-241914
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000017144	La	PF05383.17	1.9e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000025908	-	1074	-	ENSPMEP00000017144	357 (aa)	-	-

Gene Model

Click here to download ENSPMEG00000019947's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000019947's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMEG00000019947	-	94	31.407	ENSPMEG00000011085	larp6a	58	31.407

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000019947	-	97	54.885	ENSAPOG00000003568	-	93	54.885	Acanthochromis_polyacanthus
ENSPMEG00000019947	-	97	53.203	ENSACIG00000008349	-	83	53.203	Amphilophus_citrinellus
ENSPMEG00000019947	-	97	56.787	ENSAOCG00000004646	larp6b	92	56.787	Amphiprion_ocellaris
ENSPMEG00000019947	-	97	57.064	ENSAPEG00000022748	-	91	57.064	Amphiprion_percula
ENSPMEG00000019947	-	96	56.983	ENSATEG00000021222	-	90	56.983	Anabas_testudineus
ENSPMEG00000019947	-	96	53.521	ENSACLG00000009988	larp6b	89	53.521	Astatotilapia_calliptera
ENSPMEG00000019947	-	55	48.293	ENSAMXG00000018956	larp6b	85	33.578	Astyanax_mexicanus
ENSPMEG00000019947	-	56	30.846	ENSCING00000018361	-	68	30.846	Ciona_intestinalis
ENSPMEG00000019947	-	50	38.764	ENSCSAVG00000011718	-	61	38.764	Ciona_savignyi
ENSPMEG00000019947	-	99	69.167	ENSCVAG00000012145	-	92	69.167	Cyprinodon_variegatus
ENSPMEG00000019947	-	54	48.485	ENSDARG00000003968	larp6b	53	57.746	Danio_rerio
ENSPMEG00000019947	-	92	35.572	ENSELUG00000021677	larp6b	83	35.572	Esox_lucius
ENSPMEG00000019947	-	98	81.250	ENSFHEG00000010409	-	83	81.250	Fundulus_heteroclitus
ENSPMEG00000019947	-	99	97.175	ENSGAFG00000020138	-	89	97.175	Gambusia_affinis
ENSPMEG00000019947	-	96	53.239	ENSHBUG00000012344	larp6b	88	53.239	Haplochromis_burtoni
ENSPMEG00000019947	-	56	45.098	ENSIPUG00000007609	larp6b	85	32.754	Ictalurus_punctatus
ENSPMEG00000019947	-	97	53.631	ENSLBEG00000016460	-	98	53.631	Labrus_bergylta
ENSPMEG00000019947	-	98	56.474	ENSMAMG00000005509	-	90	56.474	Mastacembelus_armatus
ENSPMEG00000019947	-	96	53.239	ENSMZEG00005024390	larp6b	89	53.239	Maylandia_zebra
ENSPMEG00000019947	-	96	53.371	ENSNBRG00000012748	larp6b	90	53.371	Neolamprologus_brichardi
ENSPMEG00000019947	-	99	99.719	ENSPLAG00000005133	-	98	99.719	Poecilia_latipinna
ENSPMEG00000019947	-	99	98.023	ENSPREG00000011853	-	87	98.023	Poecilia_reticulata
ENSPMEG00000019947	-	97	51.639	ENSPNYG00000007025	larp6b	87	51.639	Pundamilia_nyererei
ENSPMEG00000019947	-	92	35.075	ENSPNAG00000023854	larp6b	84	35.075	Pygocentrus_nattereri
ENSPMEG00000019947	-	70	63.672	ENSSDUG00000009842	-	78	63.672	Seriola_dumerili
ENSPMEG00000019947	-	94	57.349	ENSSLDG00000017081	-	80	57.349	Seriola_lalandi_dorsalis
ENSPMEG00000019947	-	96	55.738	ENSSPAG00000014320	-	88	56.284	Stegastes_partitus
ENSPMEG00000019947	-	99	98.011	ENSXCOG00000018917	-	93	98.011	Xiphophorus_couchianus
ENSPMEG00000019947	-	99	98.011	ENSXMAG00000025734	-	94	98.011	Xiphophorus_maculatus