EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMEG00000019972 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: cyclin-dependent kinase-like 1
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Minus strand
Length: 7964 bases
Position: chrKQ550985.1:678950-686913
Accession: 106920055
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000017183	RIO1	PF01163.22	0.00013	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000025972	-	939	XM_014990889	ENSPMEP00000017183	312 (aa)	XP_014846375	-

Gene Model

Click here to download ENSPMEG00000019972's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000019972's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMEG00000019972	-	70	38.117	ENSPMEG00000008163	mapk12a	61	38.117
ENSPMEG00000019972	-	64	34.021	ENSPMEG00000008075	rps6ka4	50	34.021

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000019972	-	79	96.748	ENSCVAG00000010267	-	74	96.748	Cyprinodon_variegatus
ENSPMEG00000019972	-	93	82.534	ENSGAFG00000015995	-	88	82.534	Gambusia_affinis
ENSPMEG00000019972	-	100	85.577	ENSKMAG00000008845	-	100	85.577	Kryptolebias_marmoratus
ENSPMEG00000019972	-	79	100.000	ENSPFOG00000015723	-	68	100.000	Poecilia_formosa
ENSPMEG00000019972	-	100	82.709	ENSPLAG00000003942	-	100	82.709	Poecilia_latipinna
ENSPMEG00000019972	-	100	82.421	ENSPREG00000018327	-	100	82.421	Poecilia_reticulata