EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMEG00000019988 (Gene tree)
Gene ID: 106918674
Gene Symbol: srp72
Alias: -
Full Name: signal recognition particle 72
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Plus strand
Length: 10384 bases
Position: chrKQ551298.1:139011-149394
Accession: 106918674
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000017146	SRP72	PF08492.12	1.7e-21	1	1
ENSPMEP00000032235	SRP72	PF08492.12	5.2e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000025926	-	3080	XM_014988601	ENSPMEP00000017146	668 (aa)	XP_014844087	UPI00072E0AA1
ENSPMET00000025917	-	1656	-	ENSPMEP00000032235	551 (aa)	-	-

Gene Model

Click here to download ENSPMEG00000019988's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000019988's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000019988	srp72	97	76.698	ENSG00000174780	SRP72	99	76.532	Homo_sapiens
ENSPMEG00000019988	srp72	99	79.129	ENSAPOG00000019438	srp72	99	80.180	Acanthochromis_polyacanthus
ENSPMEG00000019988	srp72	96	77.344	ENSAMEG00000008469	SRP72	99	76.831	Ailuropoda_melanoleuca
ENSPMEG00000019988	srp72	100	91.058	ENSACIG00000000488	srp72	100	91.058	Amphilophus_citrinellus
ENSPMEG00000019988	srp72	100	91.181	ENSAOCG00000011256	srp72	100	92.227	Amphiprion_ocellaris
ENSPMEG00000019988	srp72	100	91.779	ENSAPEG00000001512	srp72	100	91.779	Amphiprion_percula
ENSPMEG00000019988	srp72	92	92.345	ENSATEG00000006781	srp72	99	92.195	Anabas_testudineus
ENSPMEG00000019988	srp72	99	76.772	ENSAPLG00000008751	SRP72	98	76.772	Anas_platyrhynchos
ENSPMEG00000019988	srp72	97	76.935	ENSACAG00000002381	SRP72	98	76.532	Anolis_carolinensis
ENSPMEG00000019988	srp72	95	76.935	ENSANAG00000020836	-	100	72.222	Aotus_nancymaae
ENSPMEG00000019988	srp72	100	91.480	ENSACLG00000014617	srp72	100	91.480	Astatotilapia_calliptera
ENSPMEG00000019988	srp72	98	83.359	ENSAMXG00000004011	srp72	100	83.284	Astyanax_mexicanus
ENSPMEG00000019988	srp72	97	76.852	ENSBTAG00000010593	SRP72	99	76.682	Bos_taurus
ENSPMEG00000019988	srp72	97	75.772	ENSCJAG00000017998	SRP72	99	75.635	Callithrix_jacchus
ENSPMEG00000019988	srp72	97	77.160	ENSCAFG00000002244	SRP72	99	76.981	Canis_familiaris
ENSPMEG00000019988	srp72	97	77.160	ENSCAFG00020027338	SRP72	98	77.778	Canis_lupus_dingo
ENSPMEG00000019988	srp72	97	75.193	ENSCHIG00000021465	SRP72	99	75.075	Capra_hircus
ENSPMEG00000019988	srp72	96	76.863	ENSTSYG00000010571	-	100	75.994	Carlito_syrichta
ENSPMEG00000019988	srp72	92	56.367	ENSCAPG00000016668	SRP72	100	72.650	Cavia_aperea
ENSPMEG00000019988	srp72	97	76.852	ENSCPOG00000000218	SRP72	99	76.682	Cavia_porcellus
ENSPMEG00000019988	srp72	95	76.899	ENSCCAG00000030683	-	100	72.222	Cebus_capucinus
ENSPMEG00000019988	srp72	97	74.189	ENSCCAG00000030830	-	99	74.141	Cebus_capucinus
ENSPMEG00000019988	srp72	97	76.543	ENSCATG00000008072	SRP72	99	76.383	Cercocebus_atys
ENSPMEG00000019988	srp72	98	60.823	ENSCATG00000045359	-	95	60.736	Cercocebus_atys
ENSPMEG00000019988	srp72	97	76.543	ENSCLAG00000003571	SRP72	99	76.383	Chinchilla_lanigera
ENSPMEG00000019988	srp72	97	72.685	ENSCSAG00000005079	SRP72	99	72.537	Chlorocebus_sabaeus
ENSPMEG00000019988	srp72	90	75.439	ENSCHOG00000013240	SRP72	89	75.439	Choloepus_hoffmanni
ENSPMEG00000019988	srp72	96	77.570	ENSCPBG00000015015	SRP72	99	76.981	Chrysemys_picta_bellii
ENSPMEG00000019988	srp72	96	42.066	ENSCING00000002417	-	98	41.935	Ciona_intestinalis
ENSPMEG00000019988	srp72	92	42.857	ENSCSAVG00000011288	-	96	42.176	Ciona_savignyi
ENSPMEG00000019988	srp72	97	76.543	ENSCANG00000041709	SRP72	99	76.383	Colobus_angolensis_palliatus
ENSPMEG00000019988	srp72	99	51.198	ENSCANG00000037920	-	98	52.968	Colobus_angolensis_palliatus
ENSPMEG00000019988	srp72	99	76.383	ENSCGRG00001013548	Srp72	99	76.084	Cricetulus_griseus_chok1gshd
ENSPMEG00000019988	srp72	100	73.830	ENSCGRG00000003013	Srp72	99	76.572	Cricetulus_griseus_crigri
ENSPMEG00000019988	srp72	98	89.602	ENSCSEG00000003616	srp72	100	89.686	Cynoglossus_semilaevis
ENSPMEG00000019988	srp72	91	95.731	ENSCVAG00000001520	srp72	100	95.731	Cyprinodon_variegatus
ENSPMEG00000019988	srp72	96	78.300	ENSDARG00000014139	srp72	99	81.481	Danio_rerio
ENSPMEG00000019988	srp72	97	72.769	ENSDNOG00000039012	SRP72	83	73.025	Dasypus_novemcinctus
ENSPMEG00000019988	srp72	96	76.012	ENSDORG00000000171	Srp72	99	75.635	Dipodomys_ordii
ENSPMEG00000019988	srp72	96	40.093	FBgn0038810	Srp72	98	39.848	Drosophila_melanogaster
ENSPMEG00000019988	srp72	96	76.719	ENSETEG00000005191	SRP72	99	76.383	Echinops_telfairi
ENSPMEG00000019988	srp72	83	59.829	ENSEBUG00000003696	srp72	97	62.449	Eptatretus_burgeri
ENSPMEG00000019988	srp72	97	76.543	ENSEASG00005017747	SRP72	99	76.383	Equus_asinus_asinus
ENSPMEG00000019988	srp72	97	76.389	ENSECAG00000006920	SRP72	99	76.233	Equus_caballus
ENSPMEG00000019988	srp72	100	83.210	ENSELUG00000022415	srp72	100	83.210	Esox_lucius
ENSPMEG00000019988	srp72	96	77.019	ENSFCAG00000027600	SRP72	99	76.532	Felis_catus
ENSPMEG00000019988	srp72	96	78.906	ENSFALG00000006713	SRP72	99	78.209	Ficedula_albicollis
ENSPMEG00000019988	srp72	97	48.527	ENSFDAG00000009793	-	95	48.086	Fukomys_damarensis
ENSPMEG00000019988	srp72	97	76.235	ENSFDAG00000002014	-	99	76.233	Fukomys_damarensis
ENSPMEG00000019988	srp72	100	94.918	ENSFHEG00000017652	srp72	92	94.918	Fundulus_heteroclitus
ENSPMEG00000019988	srp72	98	79.148	ENSGMOG00000005986	srp72	99	79.613	Gadus_morhua
ENSPMEG00000019988	srp72	96	78.717	ENSGALG00000011403	SRP72	99	77.877	Gallus_gallus
ENSPMEG00000019988	srp72	100	98.204	ENSGAFG00000017762	srp72	100	98.204	Gambusia_affinis
ENSPMEG00000019988	srp72	100	87.313	ENSGACG00000016749	srp72	99	88.209	Gasterosteus_aculeatus
ENSPMEG00000019988	srp72	97	78.839	ENSGAGG00000024611	SRP72	98	78.451	Gopherus_agassizii
ENSPMEG00000019988	srp72	97	76.389	ENSGGOG00000013234	-	99	76.233	Gorilla_gorilla
ENSPMEG00000019988	srp72	100	91.629	ENSHBUG00000020723	srp72	100	91.629	Haplochromis_burtoni
ENSPMEG00000019988	srp72	90	67.717	ENSHGLG00000010633	-	99	68.947	Heterocephalus_glaber_female
ENSPMEG00000019988	srp72	96	59.627	ENSHGLG00000018597	-	99	60.150	Heterocephalus_glaber_female
ENSPMEG00000019988	srp72	97	71.759	ENSHGLG00000005029	-	99	71.300	Heterocephalus_glaber_female
ENSPMEG00000019988	srp72	85	70.222	ENSHGLG00000003950	-	97	70.222	Heterocephalus_glaber_female
ENSPMEG00000019988	srp72	58	55.917	ENSHGLG00000003496	-	99	58.908	Heterocephalus_glaber_female
ENSPMEG00000019988	srp72	97	76.389	ENSHGLG00000009791	SRP72	99	76.233	Heterocephalus_glaber_female
ENSPMEG00000019988	srp72	91	59.508	ENSHGLG00100009346	-	99	57.997	Heterocephalus_glaber_male
ENSPMEG00000019988	srp72	97	76.389	ENSHGLG00100009021	SRP72	99	76.233	Heterocephalus_glaber_male
ENSPMEG00000019988	srp72	97	71.759	ENSHGLG00100011236	-	99	71.300	Heterocephalus_glaber_male
ENSPMEG00000019988	srp72	85	69.778	ENSHGLG00100017133	-	97	69.778	Heterocephalus_glaber_male
ENSPMEG00000019988	srp72	98	88.685	ENSHCOG00000013760	srp72	100	88.789	Hippocampus_comes
ENSPMEG00000019988	srp72	100	82.985	ENSIPUG00000000210	srp72	100	82.985	Ictalurus_punctatus
ENSPMEG00000019988	srp72	97	76.543	ENSSTOG00000007305	SRP72	99	76.383	Ictidomys_tridecemlineatus
ENSPMEG00000019988	srp72	96	76.406	ENSJJAG00000018324	Srp72	97	75.532	Jaculus_jaculus
ENSPMEG00000019988	srp72	100	90.882	ENSKMAG00000003776	srp72	100	90.882	Kryptolebias_marmoratus
ENSPMEG00000019988	srp72	98	82.595	ENSLOCG00000002628	srp72	98	82.424	Lepisosteus_oculatus
ENSPMEG00000019988	srp72	97	76.389	ENSLAFG00000018307	SRP72	99	76.233	Loxodonta_africana
ENSPMEG00000019988	srp72	97	76.543	ENSMFAG00000031065	SRP72	99	76.383	Macaca_fascicularis
ENSPMEG00000019988	srp72	98	62.075	ENSMFAG00000037164	-	97	62.404	Macaca_fascicularis
ENSPMEG00000019988	srp72	91	60.803	ENSMMUG00000021262	-	95	68.182	Macaca_mulatta
ENSPMEG00000019988	srp72	98	76.336	ENSMMUG00000016368	SRP72	97	76.220	Macaca_mulatta
ENSPMEG00000019988	srp72	97	76.543	ENSMNEG00000038065	-	99	76.383	Macaca_nemestrina
ENSPMEG00000019988	srp72	95	75.987	ENSMLEG00000030140	-	94	75.355	Mandrillus_leucophaeus
ENSPMEG00000019988	srp72	100	92.078	ENSMAMG00000014989	srp72	88	92.078	Mastacembelus_armatus
ENSPMEG00000019988	srp72	100	91.629	ENSMZEG00005003325	srp72	100	91.629	Maylandia_zebra
ENSPMEG00000019988	srp72	97	71.505	ENSMGAG00000008567	SRP72	100	77.447	Meleagris_gallopavo
ENSPMEG00000019988	srp72	99	76.399	ENSMAUG00000001237	Srp72	99	75.785	Mesocricetus_auratus
ENSPMEG00000019988	srp72	95	76.619	ENSMICG00000008507	-	100	71.368	Microcebus_murinus
ENSPMEG00000019988	srp72	99	76.084	ENSMOCG00000020309	Srp72	99	75.785	Microtus_ochrogaster
ENSPMEG00000019988	srp72	100	88.640	ENSMMOG00000002627	srp72	100	88.640	Mola_mola
ENSPMEG00000019988	srp72	96	74.335	ENSMODG00000020697	SRP72	99	73.692	Monodelphis_domestica
ENSPMEG00000019988	srp72	100	90.284	ENSMALG00000003747	srp72	100	90.413	Monopterus_albus
ENSPMEG00000019988	srp72	99	75.785	MGP_CAROLIEiJ_G0027323	Srp72	99	75.486	Mus_caroli
ENSPMEG00000019988	srp72	99	75.785	ENSMUSG00000036323	Srp72	99	75.486	Mus_musculus
ENSPMEG00000019988	srp72	99	76.391	MGP_PahariEiJ_G0017103	Srp72	99	75.934	Mus_pahari
ENSPMEG00000019988	srp72	99	75.785	MGP_SPRETEiJ_G0028317	Srp72	99	75.486	Mus_spretus
ENSPMEG00000019988	srp72	96	77.344	ENSMPUG00000004828	SRP72	99	76.831	Mustela_putorius_furo
ENSPMEG00000019988	srp72	96	77.067	ENSMLUG00000007344	SRP72	99	76.567	Myotis_lucifugus
ENSPMEG00000019988	srp72	100	76.523	ENSNGAG00000012595	Srp72	100	76.523	Nannospalax_galili
ENSPMEG00000019988	srp72	100	87.145	ENSNBRG00000014492	srp72	100	87.145	Neolamprologus_brichardi
ENSPMEG00000019988	srp72	97	71.296	ENSNLEG00000008806	-	100	70.940	Nomascus_leucogenys
ENSPMEG00000019988	srp72	89	76.441	ENSMEUG00000005164	SRP72	89	74.542	Notamacropus_eugenii
ENSPMEG00000019988	srp72	96	75.781	ENSOPRG00000012521	SRP72	99	75.635	Ochotona_princeps
ENSPMEG00000019988	srp72	96	75.000	ENSODEG00000012214	SRP72	99	74.589	Octodon_degus
ENSPMEG00000019988	srp72	100	91.629	ENSONIG00000001446	srp72	99	91.629	Oreochromis_niloticus
ENSPMEG00000019988	srp72	96	62.481	ENSOANG00000008562	SRP72	99	62.186	Ornithorhynchus_anatinus
ENSPMEG00000019988	srp72	97	77.315	ENSOCUG00000012226	SRP72	99	76.981	Oryctolagus_cuniculus
ENSPMEG00000019988	srp72	100	87.743	ENSORLG00000020418	srp72	99	88.191	Oryzias_latipes
ENSPMEG00000019988	srp72	100	87.593	ENSORLG00020009138	srp72	98	86.228	Oryzias_latipes_hni
ENSPMEG00000019988	srp72	100	87.892	ENSORLG00015018251	srp72	99	88.341	Oryzias_latipes_hsok
ENSPMEG00000019988	srp72	98	87.652	ENSOMEG00000022008	srp72	98	88.788	Oryzias_melastigma
ENSPMEG00000019988	srp72	97	77.160	ENSOGAG00000003578	SRP72	99	76.831	Otolemur_garnettii
ENSPMEG00000019988	srp72	97	76.698	ENSOARG00000004329	SRP72	99	76.532	Ovis_aries
ENSPMEG00000019988	srp72	91	61.333	ENSPPAG00000032490	-	91	62.407	Pan_paniscus
ENSPMEG00000019988	srp72	99	54.217	ENSPPAG00000011428	-	95	54.559	Pan_paniscus
ENSPMEG00000019988	srp72	97	76.698	ENSPPAG00000042265	SRP72	99	76.532	Pan_paniscus
ENSPMEG00000019988	srp72	96	77.188	ENSPPRG00000015991	SRP72	99	76.532	Panthera_pardus
ENSPMEG00000019988	srp72	96	77.188	ENSPTIG00000018786	SRP72	99	76.532	Panthera_tigris_altaica
ENSPMEG00000019988	srp72	99	56.127	ENSPTRG00000048100	-	95	56.489	Pan_troglodytes
ENSPMEG00000019988	srp72	97	76.698	ENSPTRG00000048466	-	99	76.532	Pan_troglodytes
ENSPMEG00000019988	srp72	91	61.143	ENSPTRG00000043609	-	95	60.140	Pan_troglodytes
ENSPMEG00000019988	srp72	97	76.543	ENSPANG00000005495	SRP72	99	76.383	Papio_anubis
ENSPMEG00000019988	srp72	98	59.786	ENSPANG00000030230	-	97	61.526	Papio_anubis
ENSPMEG00000019988	srp72	97	75.313	ENSPSIG00000003003	SRP72	100	77.605	Pelodiscus_sinensis
ENSPMEG00000019988	srp72	99	76.399	ENSPEMG00000012828	-	99	75.785	Peromyscus_maniculatus_bairdii
ENSPMEG00000019988	srp72	96	77.138	ENSPCIG00000000732	SRP72	99	76.532	Phascolarctos_cinereus
ENSPMEG00000019988	srp72	100	99.551	ENSPFOG00000003480	srp72	100	99.551	Poecilia_formosa
ENSPMEG00000019988	srp72	100	99.251	ENSPLAG00000020122	srp72	100	99.251	Poecilia_latipinna
ENSPMEG00000019988	srp72	100	98.802	ENSPREG00000006218	srp72	100	98.802	Poecilia_reticulata
ENSPMEG00000019988	srp72	64	59.843	ENSPPYG00000009152	-	97	62.725	Pongo_abelii
ENSPMEG00000019988	srp72	97	76.534	ENSPPYG00000014752	-	78	76.374	Pongo_abelii
ENSPMEG00000019988	srp72	97	75.309	ENSPVAG00000005590	SRP72	99	75.187	Pteropus_vampyrus
ENSPMEG00000019988	srp72	100	91.480	ENSPNYG00000001916	srp72	100	91.480	Pundamilia_nyererei
ENSPMEG00000019988	srp72	100	83.881	ENSPNAG00000022424	srp72	100	83.881	Pygocentrus_nattereri
ENSPMEG00000019988	srp72	99	74.102	ENSRNOG00000002100	LOC108348180	99	74.589	Rattus_norvegicus
ENSPMEG00000019988	srp72	99	59.337	ENSRBIG00000029328	-	98	59.794	Rhinopithecus_bieti
ENSPMEG00000019988	srp72	96	74.234	ENSRBIG00000042069	SRP72	99	71.407	Rhinopithecus_bieti
ENSPMEG00000019988	srp72	97	76.543	ENSRROG00000035704	SRP72	99	76.383	Rhinopithecus_roxellana
ENSPMEG00000019988	srp72	97	74.731	ENSSHAG00000000614	SRP72	99	74.443	Sarcophilus_harrisii
ENSPMEG00000019988	srp72	100	82.537	ENSSFOG00015002026	srp72	100	82.537	Scleropages_formosus
ENSPMEG00000019988	srp72	100	88.376	ENSSMAG00000007639	srp72	100	89.419	Scophthalmus_maximus
ENSPMEG00000019988	srp72	100	91.480	ENSSDUG00000007345	srp72	98	92.526	Seriola_dumerili
ENSPMEG00000019988	srp72	100	91.330	ENSSLDG00000021819	srp72	98	92.377	Seriola_lalandi_dorsalis
ENSPMEG00000019988	srp72	73	74.670	ENSSARG00000005804	SRP72	76	74.500	Sorex_araneus
ENSPMEG00000019988	srp72	96	77.570	ENSSPUG00000009740	SRP72	97	77.238	Sphenodon_punctatus
ENSPMEG00000019988	srp72	100	92.227	ENSSPAG00000011565	srp72	100	93.124	Stegastes_partitus
ENSPMEG00000019988	srp72	99	74.586	ENSSSCG00000008900	SRP72	99	74.439	Sus_scrofa
ENSPMEG00000019988	srp72	96	78.471	ENSTGUG00000004767	SRP72	99	77.645	Taeniopygia_guttata
ENSPMEG00000019988	srp72	98	87.768	ENSTRUG00000009831	srp72	100	87.892	Takifugu_rubripes
ENSPMEG00000019988	srp72	100	89.238	ENSTNIG00000013073	srp72	99	89.238	Tetraodon_nigroviridis
ENSPMEG00000019988	srp72	87	64.035	ENSTBEG00000007394	SRP72	99	55.605	Tupaia_belangeri
ENSPMEG00000019988	srp72	97	73.656	ENSTTRG00000010945	SRP72	100	76.572	Tursiops_truncatus
ENSPMEG00000019988	srp72	65	72.703	ENSUAMG00000001701	SRP72	100	76.702	Ursus_americanus
ENSPMEG00000019988	srp72	96	77.188	ENSUMAG00000008151	SRP72	99	76.682	Ursus_maritimus
ENSPMEG00000019988	srp72	97	75.772	ENSVPAG00000000458	SRP72	99	75.635	Vicugna_pacos
ENSPMEG00000019988	srp72	97	77.006	ENSVVUG00000006020	SRP72	99	76.831	Vulpes_vulpes
ENSPMEG00000019988	srp72	100	71.528	ENSXETG00000010205	srp72	100	73.783	Xenopus_tropicalis
ENSPMEG00000019988	srp72	100	98.204	ENSXMAG00000018000	srp72	99	98.195	Xiphophorus_maculatus