EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMEG00000020017 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: GDNF inducible zinc finger protein 1
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Plus strand
Length: 8086 bases
Position: chrKQ552083.1:164311-172396
Accession: 106929199
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000017223	zf-C2H2	PF00096.26	8.7e-19	1	3
ENSPMEP00000017223	zf-C2H2	PF00096.26	8.7e-19	2	3
ENSPMEP00000017223	zf-C2H2	PF00096.26	8.7e-19	3	3
ENSPMEP00000017223	zf-met	PF12874.7	0.00017	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000026036	-	7102	XM_015005922	ENSPMEP00000017223	705 (aa)	XP_014861408	-

Gene Model

Click here to download ENSPMEG00000020017's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000020017's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMEG00000020017	-	66	35.465	ENSPMEG00000005793	zbtb47b	78	35.465
ENSPMEG00000020017	-	67	35.789	ENSPMEG00000015216	zbtb41	78	39.024

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000020017	-	82	37.154	ENSG00000125812	GZF1	90	46.512	Homo_sapiens
ENSPMEG00000020017	-	68	60.788	ENSAPOG00000012930	GZF1	93	60.041	Acanthochromis_polyacanthus
ENSPMEG00000020017	-	74	36.716	ENSAMEG00000009853	GZF1	94	35.983	Ailuropoda_melanoleuca
ENSPMEG00000020017	-	96	57.873	ENSACIG00000004753	-	99	56.823	Amphilophus_citrinellus
ENSPMEG00000020017	-	65	59.488	ENSAOCG00000024275	GZF1	91	59.488	Amphiprion_ocellaris
ENSPMEG00000020017	-	100	62.880	ENSAPEG00000017195	GZF1	100	63.286	Amphiprion_percula
ENSPMEG00000020017	-	82	58.765	ENSATEG00000018374	GZF1	89	48.246	Anabas_testudineus
ENSPMEG00000020017	-	97	57.495	ENSACLG00000025866	GZF1	99	56.879	Astatotilapia_calliptera
ENSPMEG00000020017	-	99	34.332	ENSAMXG00000017178	GZF1	99	39.888	Astyanax_mexicanus
ENSPMEG00000020017	-	68	40.217	ENSCJAG00000000733	GZF1	86	40.217	Callithrix_jacchus
ENSPMEG00000020017	-	74	40.107	ENSCAFG00000005142	GZF1	93	37.885	Canis_familiaris
ENSPMEG00000020017	-	70	39.594	ENSTSYG00000028054	GZF1	88	39.594	Carlito_syrichta
ENSPMEG00000020017	-	70	41.117	ENSCAPG00000002173	GZF1	88	41.117	Cavia_aperea
ENSPMEG00000020017	-	70	41.117	ENSCPOG00000010790	GZF1	88	41.117	Cavia_porcellus
ENSPMEG00000020017	-	68	40.217	ENSCCAG00000035601	GZF1	86	40.217	Cebus_capucinus
ENSPMEG00000020017	-	68	40.217	ENSCATG00000039279	GZF1	86	40.217	Cercocebus_atys
ENSPMEG00000020017	-	70	41.117	ENSCLAG00000014714	GZF1	88	41.117	Chinchilla_lanigera
ENSPMEG00000020017	-	68	40.217	ENSCSAG00000011054	GZF1	86	40.217	Chlorocebus_sabaeus
ENSPMEG00000020017	-	55	41.436	ENSCPBG00000023418	-	69	41.436	Chrysemys_picta_bellii
ENSPMEG00000020017	-	69	42.623	ENSCPBG00000023415	GZF1	86	42.623	Chrysemys_picta_bellii
ENSPMEG00000020017	-	68	40.217	ENSCANG00000041260	GZF1	86	40.217	Colobus_angolensis_palliatus
ENSPMEG00000020017	-	68	41.304	ENSCGRG00001003944	Gzf1	86	41.304	Cricetulus_griseus_chok1gshd
ENSPMEG00000020017	-	68	41.304	ENSCGRG00000012721	Gzf1	86	41.304	Cricetulus_griseus_crigri
ENSPMEG00000020017	-	99	51.875	ENSCSEG00000002270	GZF1	99	52.621	Cynoglossus_semilaevis
ENSPMEG00000020017	-	99	71.636	ENSCVAG00000013068	-	99	73.292	Cyprinodon_variegatus
ENSPMEG00000020017	-	70	40.704	ENSDORG00000011855	Gzf1	88	40.704	Dipodomys_ordii
ENSPMEG00000020017	-	53	54.795	ENSEBUG00000004858	GZF1	57	54.795	Eptatretus_burgeri
ENSPMEG00000020017	-	68	44.196	ENSELUG00000013581	GZF1	88	42.383	Esox_lucius
ENSPMEG00000020017	-	72	39.336	ENSFCAG00000006484	GZF1	86	41.304	Felis_catus
ENSPMEG00000020017	-	97	70.515	ENSFHEG00000020498	GZF1	100	69.897	Fundulus_heteroclitus
ENSPMEG00000020017	-	69	50.312	ENSGMOG00000011017	GZF1	100	49.688	Gadus_morhua
ENSPMEG00000020017	-	71	41.206	ENSGALG00000053640	GZF1	88	41.206	Gallus_gallus
ENSPMEG00000020017	-	100	89.770	ENSGAFG00000008725	GZF1	100	89.770	Gambusia_affinis
ENSPMEG00000020017	-	69	62.062	ENSGACG00000012415	GZF1	99	63.529	Gasterosteus_aculeatus
ENSPMEG00000020017	-	82	38.160	ENSGGOG00000023248	GZF1	98	36.965	Gorilla_gorilla
ENSPMEG00000020017	-	97	57.495	ENSHBUG00000016502	-	99	56.879	Haplochromis_burtoni
ENSPMEG00000020017	-	98	46.960	ENSHCOG00000004326	GZF1	94	47.379	Hippocampus_comes
ENSPMEG00000020017	-	70	41.709	ENSSTOG00000009820	GZF1	88	41.709	Ictidomys_tridecemlineatus
ENSPMEG00000020017	-	70	40.704	ENSJJAG00000008172	Gzf1	89	40.704	Jaculus_jaculus
ENSPMEG00000020017	-	76	69.892	ENSKMAG00000001453	-	94	69.892	Kryptolebias_marmoratus
ENSPMEG00000020017	-	99	56.879	ENSLBEG00000025803	-	99	56.468	Labrus_bergylta
ENSPMEG00000020017	-	74	38.416	ENSLAFG00000002458	GZF1	94	37.452	Loxodonta_africana
ENSPMEG00000020017	-	68	47.244	ENSMFAG00000042408	GZF1	86	47.244	Macaca_fascicularis
ENSPMEG00000020017	-	68	40.217	ENSMMUG00000022387	GZF1	86	40.217	Macaca_mulatta
ENSPMEG00000020017	-	68	40.217	ENSMNEG00000033117	GZF1	86	40.217	Macaca_nemestrina
ENSPMEG00000020017	-	68	47.244	ENSMLEG00000036831	GZF1	86	47.244	Mandrillus_leucophaeus
ENSPMEG00000020017	-	99	57.464	ENSMAMG00000011931	-	99	57.055	Mastacembelus_armatus
ENSPMEG00000020017	-	97	57.700	ENSMZEG00005010711	-	99	57.084	Maylandia_zebra
ENSPMEG00000020017	-	67	41.212	ENSMAUG00000019656	Gzf1	99	41.212	Mesocricetus_auratus
ENSPMEG00000020017	-	74	36.975	ENSMICG00000046070	GZF1	94	36.975	Microcebus_murinus
ENSPMEG00000020017	-	71	38.916	ENSMOCG00000017816	Gzf1	88	38.916	Microtus_ochrogaster
ENSPMEG00000020017	-	94	56.033	ENSMMOG00000004395	-	96	43.826	Mola_mola
ENSPMEG00000020017	-	68	42.077	ENSMODG00000006238	GZF1	100	49.153	Monodelphis_domestica
ENSPMEG00000020017	-	70	41.206	MGP_CAROLIEiJ_G0024409	Gzf1	88	41.206	Mus_caroli
ENSPMEG00000020017	-	70	41.206	ENSMUSG00000027439	Gzf1	88	41.206	Mus_musculus
ENSPMEG00000020017	-	70	41.206	MGP_PahariEiJ_G0025852	Gzf1	89	41.206	Mus_pahari
ENSPMEG00000020017	-	70	41.206	MGP_SPRETEiJ_G0025327	Gzf1	88	41.206	Mus_spretus
ENSPMEG00000020017	-	72	39.810	ENSMPUG00000001160	GZF1	76	41.304	Mustela_putorius_furo
ENSPMEG00000020017	-	71	37.745	ENSMLUG00000002194	GZF1	90	37.745	Myotis_lucifugus
ENSPMEG00000020017	-	70	41.206	ENSNGAG00000024012	Gzf1	88	41.206	Nannospalax_galili
ENSPMEG00000020017	-	68	54.932	ENSNBRG00000019987	GZF1	97	54.932	Neolamprologus_brichardi
ENSPMEG00000020017	-	71	39.196	ENSNLEG00000011565	GZF1	88	39.196	Nomascus_leucogenys
ENSPMEG00000020017	-	76	37.843	ENSOPRG00000004697	GZF1	86	41.304	Ochotona_princeps
ENSPMEG00000020017	-	70	38.793	ENSODEG00000013020	GZF1	87	40.796	Octodon_degus
ENSPMEG00000020017	-	69	57.526	ENSONIG00000000989	GZF1	100	57.526	Oreochromis_niloticus
ENSPMEG00000020017	-	70	40.704	ENSOCUG00000025214	GZF1	87	40.704	Oryctolagus_cuniculus
ENSPMEG00000020017	-	98	56.667	ENSORLG00000010006	-	99	58.455	Oryzias_latipes
ENSPMEG00000020017	-	98	59.081	ENSORLG00020001395	-	57	59.499	Oryzias_latipes_hni
ENSPMEG00000020017	-	97	58.246	ENSORLG00015015364	GZF1	57	58.664	Oryzias_latipes_hsok
ENSPMEG00000020017	-	70	39.196	ENSOGAG00000028389	GZF1	88	39.196	Otolemur_garnettii
ENSPMEG00000020017	-	82	37.769	ENSPPAG00000028487	GZF1	98	36.965	Pan_paniscus
ENSPMEG00000020017	-	72	39.336	ENSPPRG00000010040	GZF1	86	41.304	Panthera_pardus
ENSPMEG00000020017	-	72	39.336	ENSPTIG00000019328	GZF1	86	41.304	Panthera_tigris_altaica
ENSPMEG00000020017	-	82	37.965	ENSPTRG00000013320	GZF1	98	36.452	Pan_troglodytes
ENSPMEG00000020017	-	68	40.217	ENSPANG00000017419	GZF1	86	40.217	Papio_anubis
ENSPMEG00000020017	-	90	40.606	ENSPKIG00000003781	GZF1	93	40.118	Paramormyrops_kingsleyae
ENSPMEG00000020017	-	69	44.059	ENSPSIG00000014208	-	57	41.436	Pelodiscus_sinensis
ENSPMEG00000020017	-	71	41.206	ENSPSIG00000014455	GZF1	88	41.206	Pelodiscus_sinensis
ENSPMEG00000020017	-	62	44.201	ENSPMGG00000003778	-	90	43.243	Periophthalmus_magnuspinnatus
ENSPMEG00000020017	-	69	40.217	ENSPEMG00000011285	Gzf1	87	40.217	Peromyscus_maniculatus_bairdii
ENSPMEG00000020017	-	68	41.848	ENSPCIG00000013803	GZF1	85	41.848	Phascolarctos_cinereus
ENSPMEG00000020017	-	100	95.378	ENSPFOG00000002393	GZF1	100	95.378	Poecilia_formosa
ENSPMEG00000020017	-	100	98.723	ENSPLAG00000005232	GZF1	100	98.723	Poecilia_latipinna
ENSPMEG00000020017	-	100	70.536	ENSPREG00000016398	GZF1	100	71.164	Poecilia_reticulata
ENSPMEG00000020017	-	63	41.304	ENSPCAG00000007544	GZF1	98	41.304	Procavia_capensis
ENSPMEG00000020017	-	74	37.525	ENSPCOG00000024180	GZF1	93	36.986	Propithecus_coquereli
ENSPMEG00000020017	-	74	38.000	ENSPVAG00000014056	GZF1	93	38.012	Pteropus_vampyrus
ENSPMEG00000020017	-	70	41.206	ENSRNOG00000004735	Gzf1	88	41.206	Rattus_norvegicus
ENSPMEG00000020017	-	68	48.031	ENSRBIG00000028715	GZF1	86	48.031	Rhinopithecus_bieti
ENSPMEG00000020017	-	68	48.031	ENSRROG00000030533	GZF1	86	48.031	Rhinopithecus_roxellana
ENSPMEG00000020017	-	68	40.437	ENSSHAG00000009367	GZF1	86	40.217	Sarcophilus_harrisii
ENSPMEG00000020017	-	89	40.936	ENSSFOG00015008631	gzf1	87	40.546	Scleropages_formosus
ENSPMEG00000020017	-	99	61.382	ENSSDUG00000008186	GZF1	99	61.382	Seriola_dumerili
ENSPMEG00000020017	-	98	61.145	ENSSLDG00000002382	GZF1	99	61.145	Seriola_lalandi_dorsalis
ENSPMEG00000020017	-	82	37.051	ENSSPUG00000004147	GZF1	89	35.714	Sphenodon_punctatus
ENSPMEG00000020017	-	100	53.324	ENSSPAG00000011759	GZF1	100	47.275	Stegastes_partitus
ENSPMEG00000020017	-	98	53.239	ENSTRUG00000006128	-	98	52.834	Takifugu_rubripes
ENSPMEG00000020017	-	68	51.250	ENSTNIG00000010722	GZF1	100	50.833	Tetraodon_nigroviridis
ENSPMEG00000020017	-	68	41.758	ENSTTRG00000011345	GZF1	86	41.758	Tursiops_truncatus
ENSPMEG00000020017	-	74	37.622	ENSUMAG00000004065	GZF1	94	36.975	Ursus_maritimus
ENSPMEG00000020017	-	74	37.984	ENSVVUG00000012086	GZF1	95	38.431	Vulpes_vulpes
ENSPMEG00000020017	-	69	43.407	ENSXETG00000004510	gzf1	61	52.874	Xenopus_tropicalis
ENSPMEG00000020017	-	98	89.979	ENSXMAG00000023249	GZF1	100	89.979	Xiphophorus_maculatus