EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMEG00000020446 (Gene tree)
Gene ID: 106924260
Gene Symbol: setd1ba
Alias: -
Full Name: SET domain containing 1B
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Plus strand
Length: 15874 bases
Position: chrKQ551017.1:709201-725074
Accession: 106924260
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000032530	RRM_1	PF00076.22	2.6e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000026568	-	7276	XM_014997869	ENSPMEP00000032530	1819 (aa)	XP_014853355	UPI00072DE625

Gene Model

Click here to download ENSPMEG00000020446's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000020446's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMEG00000020446	setd1ba	53	67.213	ENSPMEG00000005864	setd1a	56	67.213

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000020446	setd1ba	100	73.460	ENSACIG00000016453	setd1ba	56	82.394	Amphilophus_citrinellus
ENSPMEG00000020446	setd1ba	97	78.424	ENSAOCG00000012148	setd1ba	99	78.256	Amphiprion_ocellaris
ENSPMEG00000020446	setd1ba	100	77.011	ENSAPEG00000010762	setd1ba	55	81.262	Amphiprion_percula
ENSPMEG00000020446	setd1ba	89	81.957	ENSATEG00000021563	setd1ba	98	81.957	Anabas_testudineus
ENSPMEG00000020446	setd1ba	87	57.269	ENSAPLG00000005217	SETD1B	86	56.651	Anas_platyrhynchos
ENSPMEG00000020446	setd1ba	53	69.436	ENSCAFG00020016619	SETD1B	83	51.567	Canis_lupus_dingo
ENSPMEG00000020446	setd1ba	59	69.868	ENSCLAG00000011583	SETD1A	65	68.690	Chinchilla_lanigera
ENSPMEG00000020446	setd1ba	62	68.726	ENSCANG00000023445	SETD1B	76	66.182	Colobus_angolensis_palliatus
ENSPMEG00000020446	setd1ba	51	85.235	ENSCGRG00000018075	Setd1b	64	81.115	Cricetulus_griseus_crigri
ENSPMEG00000020446	setd1ba	100	80.044	ENSCVAG00000022068	setd1ba	99	79.662	Cyprinodon_variegatus
ENSPMEG00000020446	setd1ba	55	64.833	ENSDARG00000060847	setd1ba	53	64.405	Danio_rerio
ENSPMEG00000020446	setd1ba	51	85.390	ENSFALG00000009136	SETD1B	88	56.752	Ficedula_albicollis
ENSPMEG00000020446	setd1ba	100	84.423	ENSFHEG00000013126	setd1ba	100	84.368	Fundulus_heteroclitus
ENSPMEG00000020446	setd1ba	52	88.889	ENSGMOG00000009831	setd1ba	59	88.889	Gadus_morhua
ENSPMEG00000020446	setd1ba	94	93.802	ENSGAFG00000008712	setd1ba	95	93.802	Gambusia_affinis
ENSPMEG00000020446	setd1ba	54	76.061	ENSGACG00000017002	setd1ba	57	76.061	Gasterosteus_aculeatus
ENSPMEG00000020446	setd1ba	54	80.589	ENSKMAG00000007804	setd1ba	54	80.059	Kryptolebias_marmoratus
ENSPMEG00000020446	setd1ba	100	72.093	ENSLBEG00000020113	setd1ba	54	76.697	Labrus_bergylta
ENSPMEG00000020446	setd1ba	69	79.874	ENSLAFG00000026518	SETD1B	74	78.221	Loxodonta_africana
ENSPMEG00000020446	setd1ba	50	57.364	ENSMFAG00000030930	SETD1B	91	54.519	Macaca_fascicularis
ENSPMEG00000020446	setd1ba	54	81.111	ENSMMOG00000008190	setd1ba	55	80.807	Mola_mola
ENSPMEG00000020446	setd1ba	100	78.122	ENSNBRG00000002915	setd1ba	55	83.071	Neolamprologus_brichardi
ENSPMEG00000020446	setd1ba	64	82.278	ENSNLEG00000001254	SETD1B	75	80.805	Nomascus_leucogenys
ENSPMEG00000020446	setd1ba	50	78.788	ENSODEG00000010155	SETD1B	83	53.343	Octodon_degus
ENSPMEG00000020446	setd1ba	63	66.984	ENSONIG00000010832	-	63	57.692	Oreochromis_niloticus
ENSPMEG00000020446	setd1ba	100	78.266	ENSONIG00000013898	setd1ba	55	82.677	Oreochromis_niloticus
ENSPMEG00000020446	setd1ba	100	72.189	ENSORLG00000008435	setd1ba	55	77.106	Oryzias_latipes
ENSPMEG00000020446	setd1ba	100	72.406	ENSORLG00020017079	setd1ba	55	76.855	Oryzias_latipes_hni
ENSPMEG00000020446	setd1ba	67	72.459	ENSORLG00015004156	setd1ba	81	78.346	Oryzias_latipes_hsok
ENSPMEG00000020446	setd1ba	70	80.488	ENSPPRG00000021041	SETD1B	86	52.632	Panthera_pardus
ENSPMEG00000020446	setd1ba	85	77.592	ENSPMGG00000011527	setd1ba	92	77.592	Periophthalmus_magnuspinnatus
ENSPMEG00000020446	setd1ba	64	80.317	ENSPCIG00000028605	SETD1B	85	58.684	Phascolarctos_cinereus
ENSPMEG00000020446	setd1ba	100	99.395	ENSPFOG00000019768	setd1ba	100	99.395	Poecilia_formosa
ENSPMEG00000020446	setd1ba	100	98.186	ENSPLAG00000023459	setd1ba	100	98.186	Poecilia_latipinna
ENSPMEG00000020446	setd1ba	100	97.746	ENSPREG00000011589	setd1ba	100	97.746	Poecilia_reticulata
ENSPMEG00000020446	setd1ba	100	76.994	ENSPNYG00000009484	setd1ba	56	83.169	Pundamilia_nyererei
ENSPMEG00000020446	setd1ba	77	58.379	ENSPNAG00000016011	setd1ba	57	64.756	Pygocentrus_nattereri
ENSPMEG00000020446	setd1ba	52	75.000	ENSRNOG00000001337	Setd1b	85	50.281	Rattus_norvegicus
ENSPMEG00000020446	setd1ba	96	61.004	ENSSFOG00015015331	setd1ba	94	58.207	Scleropages_formosus
ENSPMEG00000020446	setd1ba	51	64.333	ENSSPUG00000011847	SETD1B	84	56.059	Sphenodon_punctatus
ENSPMEG00000020446	setd1ba	66	80.183	ENSSSCG00000009806	SETD1B	91	59.860	Sus_scrofa
ENSPMEG00000020446	setd1ba	66	79.878	ENSUAMG00000008729	SETD1B	84	53.015	Ursus_americanus
ENSPMEG00000020446	setd1ba	96	55.572	ENSXETG00000003760	setd1b	85	53.903	Xenopus_tropicalis
ENSPMEG00000020446	setd1ba	100	90.235	ENSXCOG00000004451	setd1ba	99	90.125	Xiphophorus_couchianus
ENSPMEG00000020446	setd1ba	99	93.911	ENSXMAG00000014097	setd1ba	100	93.889	Xiphophorus_maculatus