EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMEG00000020472 (Gene tree)
Gene ID: 106930525
Gene Symbol: rabl6b
Alias: -
Full Name: RAB%2C member RAS oncogene family like 6
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Plus strand
Length: 16862 bases
Position: chrKQ552228.1:45304-62165
Accession: 106930525
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000017576	MMR_HSR1	PF01926.23	0.00017	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000033852	-	3120	XM_015008130	ENSPMEP00000017585	758 (aa)	XP_014863616	-
ENSPMET00000026458	-	3090	XM_015008133	ENSPMEP00000017576	748 (aa)	XP_014863619	-
ENSPMET00000026442	-	1506	-	ENSPMEP00000032495	501 (aa)	-	-

Gene Model

Click here to download ENSPMEG00000020472's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000020472's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000020472	rabl6b	100	78.075	ENSACIG00000010721	rabl6b	100	77.807	Amphilophus_citrinellus
ENSPMEG00000020472	rabl6b	100	85.314	ENSATEG00000012055	rabl6b	100	85.314	Anabas_testudineus
ENSPMEG00000020472	rabl6b	100	78.927	ENSCSEG00000016135	rabl6b	100	79.058	Cynoglossus_semilaevis
ENSPMEG00000020472	rabl6b	100	69.302	ENSCSEG00000012430	-	95	77.400	Cynoglossus_semilaevis
ENSPMEG00000020472	rabl6b	100	65.935	ENSELUG00000004448	rabl6b	100	67.137	Esox_lucius
ENSPMEG00000020472	rabl6b	100	86.364	ENSGAFG00000013561	rabl6b	100	83.333	Gambusia_affinis
ENSPMEG00000020472	rabl6b	100	77.261	ENSGACG00000005242	rabl6b	100	79.122	Gasterosteus_aculeatus
ENSPMEG00000020472	rabl6b	100	83.733	ENSHBUG00000014235	rabl6b	100	84.667	Haplochromis_burtoni
ENSPMEG00000020472	rabl6b	100	63.882	ENSIPUG00000019266	rabl6	100	61.104	Ictalurus_punctatus
ENSPMEG00000020472	rabl6b	100	77.200	ENSMAMG00000019516	rabl6b	100	77.600	Mastacembelus_armatus
ENSPMEG00000020472	rabl6b	63	73.053	ENSMZEG00005003942	rabl6b	99	74.105	Maylandia_zebra
ENSPMEG00000020472	rabl6b	64	71.608	ENSMMOG00000009459	rabl6b	97	65.126	Mola_mola
ENSPMEG00000020472	rabl6b	100	82.754	ENSMALG00000002029	rabl6b	100	82.754	Monopterus_albus
ENSPMEG00000020472	rabl6b	63	74.473	ENSNBRG00000012512	rabl6b	99	74.051	Neolamprologus_brichardi
ENSPMEG00000020472	rabl6b	100	81.150	ENSONIG00000010408	rabl6b	100	83.021	Oreochromis_niloticus
ENSPMEG00000020472	rabl6b	100	79.101	ENSORLG00020017557	rabl6b	100	78.704	Oryzias_latipes_hni
ENSPMEG00000020472	rabl6b	89	79.674	ENSORLG00015007848	rabl6b	92	79.732	Oryzias_latipes_hsok
ENSPMEG00000020472	rabl6b	89	81.325	ENSOMEG00000022840	rabl6b	96	81.024	Oryzias_melastigma
ENSPMEG00000020472	rabl6b	100	62.370	ENSPKIG00000007459	RABL6	100	61.479	Paramormyrops_kingsleyae
ENSPMEG00000020472	rabl6b	90	60.674	ENSPCIG00000023722	RABL6	90	59.424	Phascolarctos_cinereus
ENSPMEG00000020472	rabl6b	100	99.064	ENSPFOG00000003250	rabl6b	100	99.064	Poecilia_formosa
ENSPMEG00000020472	rabl6b	100	98.930	ENSPLAG00000019562	rabl6b	100	98.930	Poecilia_latipinna
ENSPMEG00000020472	rabl6b	89	97.605	ENSPREG00000014116	rabl6b	94	97.605	Poecilia_reticulata
ENSPMEG00000020472	rabl6b	90	64.466	ENSPNAG00000010857	rabl6b	92	65.149	Pygocentrus_nattereri
ENSPMEG00000020472	rabl6b	99	64.597	ENSSFOG00015013414	-	99	63.081	Scleropages_formosus
ENSPMEG00000020472	rabl6b	100	64.021	ENSSFOG00015017388	RABL6	100	60.180	Scleropages_formosus
ENSPMEG00000020472	rabl6b	88	84.242	ENSSMAG00000012543	rabl6b	95	83.584	Scophthalmus_maximus
ENSPMEG00000020472	rabl6b	100	85.581	ENSSDUG00000006564	rabl6b	100	85.314	Seriola_dumerili
ENSPMEG00000020472	rabl6b	100	83.422	ENSSPAG00000021033	rabl6b	95	88.404	Stegastes_partitus
ENSPMEG00000020472	rabl6b	99	73.158	ENSTNIG00000010595	rabl6b	100	72.427	Tetraodon_nigroviridis