EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPMEG00000020602 (Gene tree)
Gene ID
106915420
Gene Symbol
rpa1
Alias
-
Full Name
replication protein A 70 kDa DNA-binding subunit-like
Gene Type
protein_coding
Species
Poecilia_mexicana
Status
putative
Strand
Plus strand
Length
32478 bases
Position
chrKQ551142.1:231135-263612
Accession
106915420
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPMEP00000017692tRNA_anti-codonPF01336.259.8e-1311
ENSPMEP00000017706tRNA_anti-codonPF01336.251.1e-1211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPMET00000026611-1686-ENSPMEP00000017692561 (aa)--
ENSPMET00000026623-3161XM_014983011ENSPMEP00000017706600 (aa)XP_014838497UPI00072DDE0B
Gene Model
Click here to download ENSPMEG00000020602's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000020602's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPMEG00000020602rpa18669.059ENSPMEG00000003627-9658.117
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPMEG00000020602rpa19984.833ENSAPOG00000011658rpa19984.833Acanthochromis_polyacanthus
ENSPMEG00000020602rpa19962.624ENSAPOG00000019409RPA18069.816Acanthochromis_polyacanthus
ENSPMEG00000020602rpa19964.035ENSAMEG00000007706RPA19862.890Ailuropoda_melanoleuca
ENSPMEG00000020602rpa19962.172ENSACIG00000012881RPA19962.351Amphilophus_citrinellus
ENSPMEG00000020602rpa19676.736ENSACIG00000007277rpa19976.736Amphilophus_citrinellus
ENSPMEG00000020602rpa19959.180ENSAOCG00000009003RPA19959.259Amphiprion_ocellaris
ENSPMEG00000020602rpa19983.472ENSAOCG00000023376rpa19983.472Amphiprion_ocellaris
ENSPMEG00000020602rpa19983.639ENSAPEG00000008634rpa19983.639Amphiprion_percula
ENSPMEG00000020602rpa19369.977ENSAPEG00000019132RPA19957.466Amphiprion_percula
ENSPMEG00000020602rpa110082.832ENSATEG00000022024rpa110082.837Anabas_testudineus
ENSPMEG00000020602rpa19960.000ENSATEG00000006443RPA19959.692Anabas_testudineus
ENSPMEG00000020602rpa19955.382ENSAPLG00000012442RPA19955.572Anas_platyrhynchos
ENSPMEG00000020602rpa19956.918ENSACAG00000014490RPA19856.911Anolis_carolinensis
ENSPMEG00000020602rpa19963.929ENSANAG00000023456RPA19864.516Aotus_nancymaae
ENSPMEG00000020602rpa19962.047ENSACLG00000005223RPA19962.047Astatotilapia_calliptera
ENSPMEG00000020602rpa19983.957ENSACLG00000006640rpa19984.547Astatotilapia_calliptera
ENSPMEG00000020602rpa19976.910ENSAMXG00000008418rpa19977.371Astyanax_mexicanus
ENSPMEG00000020602rpa19962.694ENSBTAG00000009711RPA19961.951Bos_taurus
ENSPMEG00000020602rpa17932.080WBGene00017546rpa-16832.080Caenorhabditis_elegans
ENSPMEG00000020602rpa19963.316ENSCJAG00000001848RPA19962.520Callithrix_jacchus
ENSPMEG00000020602rpa19963.796ENSCAFG00000019249RPA19962.951Canis_familiaris
ENSPMEG00000020602rpa19963.796ENSCAFG00020009847RPA19962.951Canis_lupus_dingo
ENSPMEG00000020602rpa19962.522ENSCHIG00000026308RPA19962.052Capra_hircus
ENSPMEG00000020602rpa19962.544ENSTSYG00000003482-9962.029Carlito_syrichta
ENSPMEG00000020602rpa19963.322ENSCPOG00000000035RPA19963.322Cavia_porcellus
ENSPMEG00000020602rpa19952.910ENSCCAG00000010981RPA19952.700Cebus_capucinus
ENSPMEG00000020602rpa19963.269ENSCLAG00000005185-9962.829Chinchilla_lanigera
ENSPMEG00000020602rpa19959.331ENSCLAG00000015045-9858.979Chinchilla_lanigera
ENSPMEG00000020602rpa19953.427ENSCSAG00000013833RPA19953.191Chlorocebus_sabaeus
ENSPMEG00000020602rpa17770.670ENSCHOG00000009454-9970.670Choloepus_hoffmanni
ENSPMEG00000020602rpa19961.672ENSCHOG00000013540-9962.564Choloepus_hoffmanni
ENSPMEG00000020602rpa19963.875ENSCPBG00000020377RPA19964.727Chrysemys_picta_bellii
ENSPMEG00000020602rpa19944.248ENSCING00000023482-9943.234Ciona_intestinalis
ENSPMEG00000020602rpa19964.464ENSCANG00000030911RPA19962.755Colobus_angolensis_palliatus
ENSPMEG00000020602rpa19963.874ENSCGRG00001008197Rpa19962.338Cricetulus_griseus_chok1gshd
ENSPMEG00000020602rpa18169.063ENSCGRG00000000582Rpa19964.625Cricetulus_griseus_crigri
ENSPMEG00000020602rpa110079.407ENSCSEG00000013066rpa110079.407Cynoglossus_semilaevis
ENSPMEG00000020602rpa19957.045ENSCSEG00000012726RPA19957.045Cynoglossus_semilaevis
ENSPMEG00000020602rpa110090.280ENSCVAG00000019431rpa110090.445Cyprinodon_variegatus
ENSPMEG00000020602rpa18868.735ENSCVAG00000013446-9655.452Cyprinodon_variegatus
ENSPMEG00000020602rpa19974.791ENSDARG00000003938rpa19974.791Danio_rerio
ENSPMEG00000020602rpa19963.763ENSDNOG00000017218RPA19863.245Dasypus_novemcinctus
ENSPMEG00000020602rpa19963.937ENSDORG00000006199Rpa19962.908Dipodomys_ordii
ENSPMEG00000020602rpa19943.007FBgn0010173RpA-709943.934Drosophila_melanogaster
ENSPMEG00000020602rpa18274.468ENSETEG00000017608RPA18174.468Echinops_telfairi
ENSPMEG00000020602rpa19964.107ENSEASG00005009372RPA19863.588Equus_asinus_asinus
ENSPMEG00000020602rpa19963.066ENSECAG00000023886RPA19962.890Equus_caballus
ENSPMEG00000020602rpa17470.644ENSEEUG00000002186-6870.644Erinaceus_europaeus
ENSPMEG00000020602rpa19561.368ENSELUG00000006136RPA19961.368Esox_lucius
ENSPMEG00000020602rpa19978.607ENSELUG00000021071rpa19978.607Esox_lucius
ENSPMEG00000020602rpa19963.130ENSFCAG00000006306RPA19962.643Felis_catus
ENSPMEG00000020602rpa19963.591ENSFALG00000006575RPA19863.591Ficedula_albicollis
ENSPMEG00000020602rpa19963.972ENSFDAG00000007720RPA19963.158Fukomys_damarensis
ENSPMEG00000020602rpa110090.413ENSFHEG00000003580rpa110090.413Fundulus_heteroclitus
ENSPMEG00000020602rpa19976.786ENSGMOG00000010382rpa19976.174Gadus_morhua
ENSPMEG00000020602rpa19962.086ENSGALG00000003072RPA19862.086Gallus_gallus
ENSPMEG00000020602rpa19169.037ENSGAFG00000020953RPA19957.447Gambusia_affinis
ENSPMEG00000020602rpa110096.500ENSGAFG00000012916rpa110096.500Gambusia_affinis
ENSPMEG00000020602rpa110081.095ENSGACG00000010856rpa110081.095Gasterosteus_aculeatus
ENSPMEG00000020602rpa19963.218ENSGAGG00000013611RPA19963.218Gopherus_agassizii
ENSPMEG00000020602rpa19964.821ENSGGOG00000014186RPA19963.333Gorilla_gorilla
ENSPMEG00000020602rpa19957.118ENSHBUG00000009348RPA19857.439Haplochromis_burtoni
ENSPMEG00000020602rpa19987.000ENSHBUG00000017773rpa19987.000Haplochromis_burtoni
ENSPMEG00000020602rpa19963.620ENSHGLG00000008846RPA19962.829Heterocephalus_glaber_female
ENSPMEG00000020602rpa19959.582ENSHGLG00100000799-9859.046Heterocephalus_glaber_male
ENSPMEG00000020602rpa19963.620ENSHGLG00100017755-9962.829Heterocephalus_glaber_male
ENSPMEG00000020602rpa19953.927ENSHGLG00100002005-9952.932Heterocephalus_glaber_male
ENSPMEG00000020602rpa19946.195ENSHCOG00000000351RPA19246.316Hippocampus_comes
ENSPMEG00000020602rpa110074.715ENSHCOG00000001401rpa110074.551Hippocampus_comes
ENSPMEG00000020602rpa19975.290ENSIPUG00000004400rpa19975.290Ictalurus_punctatus
ENSPMEG00000020602rpa19861.620ENSSTOG00000022475RPA19562.676Ictidomys_tridecemlineatus
ENSPMEG00000020602rpa19963.700ENSJJAG00000000876Rpa19864.068Jaculus_jaculus
ENSPMEG00000020602rpa110080.882ENSKMAG00000005605rpa110081.403Kryptolebias_marmoratus
ENSPMEG00000020602rpa19961.032ENSKMAG00000000234RPA19960.496Kryptolebias_marmoratus
ENSPMEG00000020602rpa19981.788ENSLBEG00000021604rpa19981.788Labrus_bergylta
ENSPMEG00000020602rpa19768.864ENSLBEG00000002281RPA18368.864Labrus_bergylta
ENSPMEG00000020602rpa18164.009ENSLACG00000007210RPA19961.200Latimeria_chalumnae
ENSPMEG00000020602rpa19972.093ENSLOCG00000006397rpa19971.953Lepisosteus_oculatus
ENSPMEG00000020602rpa19962.522ENSLAFG00000015354RPA19961.489Loxodonta_africana
ENSPMEG00000020602rpa18260.421ENSMFAG00000036138-9860.808Macaca_fascicularis
ENSPMEG00000020602rpa19963.445ENSMMUG00000011604-9763.667Macaca_mulatta
ENSPMEG00000020602rpa19958.772ENSMMUG00000002442-9957.756Macaca_mulatta
ENSPMEG00000020602rpa19963.093ENSMNEG00000031632-9863.311Macaca_nemestrina
ENSPMEG00000020602rpa18765.188ENSMNEG00000029837-9665.188Macaca_nemestrina
ENSPMEG00000020602rpa19960.070ENSMLEG00000038768-9760.237Mandrillus_leucophaeus
ENSPMEG00000020602rpa19668.837ENSMAMG00000020097RPA19262.249Mastacembelus_armatus
ENSPMEG00000020602rpa110084.692ENSMAMG00000017993rpa110084.692Mastacembelus_armatus
ENSPMEG00000020602rpa19962.047ENSMZEG00005024731RPA19962.047Maylandia_zebra
ENSPMEG00000020602rpa19986.667ENSMZEG00005007551rpa19986.667Maylandia_zebra
ENSPMEG00000020602rpa19961.053ENSMGAG00000005315RPA19861.398Meleagris_gallopavo
ENSPMEG00000020602rpa19963.845ENSMAUG00000010474Rpa19864.237Mesocricetus_auratus
ENSPMEG00000020602rpa19963.304ENSMICG00000012867RPA19963.295Microcebus_murinus
ENSPMEG00000020602rpa19963.445ENSMOCG00000013019Rpa19962.562Microtus_ochrogaster
ENSPMEG00000020602rpa19962.143ENSMMOG00000010868RPA19861.500Mola_mola
ENSPMEG00000020602rpa110080.427ENSMMOG00000014292rpa110082.788Mola_mola
ENSPMEG00000020602rpa110062.827ENSMODG00000010549RPA19962.193Monodelphis_domestica
ENSPMEG00000020602rpa19962.725ENSMALG00000001208RPA19562.725Monopterus_albus
ENSPMEG00000020602rpa110085.691ENSMALG00000011453rpa110085.691Monopterus_albus
ENSPMEG00000020602rpa19963.398MGP_CAROLIEiJ_G0016734Rpa19962.215Mus_caroli
ENSPMEG00000020602rpa19962.674ENSMUSG00000000751Rpa19961.613Mus_musculus
ENSPMEG00000020602rpa19964.111MGP_PahariEiJ_G0017871Rpa19962.561Mus_pahari
ENSPMEG00000020602rpa19962.565MGP_SPRETEiJ_G0017577Rpa19961.514Mus_spretus
ENSPMEG00000020602rpa19963.589ENSMPUG00000013119RPA19962.908Mustela_putorius_furo
ENSPMEG00000020602rpa19962.803ENSMLUG00000006113RPA19563.468Myotis_lucifugus
ENSPMEG00000020602rpa19963.509ENSNGAG00000004522Rpa19363.652Nannospalax_galili
ENSPMEG00000020602rpa19960.993ENSNBRG00000009672RPA19760.403Neolamprologus_brichardi
ENSPMEG00000020602rpa19983.601ENSNBRG00000020595rpa19984.183Neolamprologus_brichardi
ENSPMEG00000020602rpa19963.972ENSNLEG00000017149RPA19963.399Nomascus_leucogenys
ENSPMEG00000020602rpa19953.184ENSMEUG00000006714RPA19754.484Notamacropus_eugenii
ENSPMEG00000020602rpa19961.285ENSODEG00000009038RPA19661.953Octodon_degus
ENSPMEG00000020602rpa19985.294ENSONIG00000013135rpa19985.294Oreochromis_niloticus
ENSPMEG00000020602rpa110063.700ENSOANG00000010880RPA19963.742Ornithorhynchus_anatinus
ENSPMEG00000020602rpa19960.732ENSOCUG00000001504RPA19960.559Oryctolagus_cuniculus
ENSPMEG00000020602rpa19984.448ENSORLG00000004856rpa19984.448Oryzias_latipes
ENSPMEG00000020602rpa19956.528ENSORLG00000003368RPA19956.528Oryzias_latipes
ENSPMEG00000020602rpa19465.188ENSORLG00020015284RPA19953.394Oryzias_latipes_hni
ENSPMEG00000020602rpa19984.783ENSORLG00020008980rpa19984.783Oryzias_latipes_hni
ENSPMEG00000020602rpa19957.095ENSORLG00015020383RPA19956.964Oryzias_latipes_hsok
ENSPMEG00000020602rpa19984.783ENSORLG00015013982rpa19984.783Oryzias_latipes_hsok
ENSPMEG00000020602rpa17664.336ENSORLG00015005867-9864.336Oryzias_latipes_hsok
ENSPMEG00000020602rpa19981.803ENSOMEG00000004704rpa19981.803Oryzias_melastigma
ENSPMEG00000020602rpa19959.786ENSOMEG00000011040RPA19959.059Oryzias_melastigma
ENSPMEG00000020602rpa17575.419ENSOGAG00000029379-9875.419Otolemur_garnettii
ENSPMEG00000020602rpa19963.620ENSOGAG00000005581-9962.745Otolemur_garnettii
ENSPMEG00000020602rpa19962.762ENSOARG00000014479RPA19962.276Ovis_aries
ENSPMEG00000020602rpa19964.021ENSPPAG00000039680RPA19963.889Pan_paniscus
ENSPMEG00000020602rpa19962.957ENSPPRG00000011807RPA19862.787Panthera_pardus
ENSPMEG00000020602rpa19962.957ENSPTIG00000007898RPA19962.480Panthera_tigris_altaica
ENSPMEG00000020602rpa19964.198ENSPTRG00000008539RPA19964.052Pan_troglodytes
ENSPMEG00000020602rpa19963.620ENSPANG00000024592RPA19962.684Papio_anubis
ENSPMEG00000020602rpa19476.140ENSPKIG00000008053rpa19376.491Paramormyrops_kingsleyae
ENSPMEG00000020602rpa19964.499ENSPSIG00000015617RPA19764.346Pelodiscus_sinensis
ENSPMEG00000020602rpa19961.388ENSPMGG00000000543RPA19962.657Periophthalmus_magnuspinnatus
ENSPMEG00000020602rpa19979.537ENSPMGG00000011589rpa19879.756Periophthalmus_magnuspinnatus
ENSPMEG00000020602rpa19964.085ENSPEMG00000021061Rpa19963.622Peromyscus_maniculatus_bairdii
ENSPMEG00000020602rpa19962.872ENSPCIG00000019049RPA19961.866Phascolarctos_cinereus
ENSPMEG00000020602rpa110099.833ENSPFOG00000003987rpa110099.833Poecilia_formosa
ENSPMEG00000020602rpa18669.118ENSPLAG00000008844-9758.604Poecilia_latipinna
ENSPMEG00000020602rpa110099.333ENSPLAG00000004984rpa110099.333Poecilia_latipinna
ENSPMEG00000020602rpa19388.551ENSPREG00000010174rpa19588.551Poecilia_reticulata
ENSPMEG00000020602rpa19269.037ENSPREG00000010119RPA19956.101Poecilia_reticulata
ENSPMEG00000020602rpa19963.415ENSPCOG00000001799RPA19962.745Propithecus_coquereli
ENSPMEG00000020602rpa19962.544ENSPVAG00000002149RPA19962.092Pteropus_vampyrus
ENSPMEG00000020602rpa19961.890ENSPNYG00000024165RPA19961.890Pundamilia_nyererei
ENSPMEG00000020602rpa19987.000ENSPNYG00000016316rpa19987.000Pundamilia_nyererei
ENSPMEG00000020602rpa19968.121ENSPNAG00000008599rpa19669.634Pygocentrus_nattereri
ENSPMEG00000020602rpa19970.244ENSRNOG00000003123Rpa19963.175Rattus_norvegicus
ENSPMEG00000020602rpa19963.304ENSRBIG00000036587RPA19962.684Rhinopithecus_bieti
ENSPMEG00000020602rpa19958.087ENSRROG00000043278RPA19957.774Rhinopithecus_roxellana
ENSPMEG00000020602rpa19432.021YAR007CRFA19332.021Saccharomyces_cerevisiae
ENSPMEG00000020602rpa19764.029ENSSBOG00000030233RPA19665.171Saimiri_boliviensis_boliviensis
ENSPMEG00000020602rpa19963.636ENSSHAG00000007969RPA19563.912Sarcophilus_harrisii
ENSPMEG00000020602rpa110077.345ENSSFOG00015005362rpa19278.239Scleropages_formosus
ENSPMEG00000020602rpa19168.481ENSSMAG00000019746RPA19956.079Scophthalmus_maximus
ENSPMEG00000020602rpa110085.358ENSSDUG00000011949rpa110085.358Seriola_dumerili
ENSPMEG00000020602rpa19270.370ENSSDUG00000016358RPA19263.600Seriola_dumerili
ENSPMEG00000020602rpa19269.907ENSSLDG00000020784RPA19363.200Seriola_lalandi_dorsalis
ENSPMEG00000020602rpa110085.524ENSSLDG00000011806rpa110085.524Seriola_lalandi_dorsalis
ENSPMEG00000020602rpa18878.788ENSSARG00000007506RPA18778.788Sorex_araneus
ENSPMEG00000020602rpa110060.839ENSSPUG00000007223RPA19862.373Sphenodon_punctatus
ENSPMEG00000020602rpa19965.179ENSSPAG00000011165RPA19863.283Stegastes_partitus
ENSPMEG00000020602rpa110084.692ENSSPAG00000009903rpa110084.692Stegastes_partitus
ENSPMEG00000020602rpa19962.943ENSSSCG00000017822RPA19863.007Sus_scrofa
ENSPMEG00000020602rpa19962.914ENSTGUG00000005775RPA19862.914Taeniopygia_guttata
ENSPMEG00000020602rpa19968.925ENSTRUG00000000405RPA19968.736Takifugu_rubripes
ENSPMEG00000020602rpa19980.602ENSTRUG00000003616rpa19980.602Takifugu_rubripes
ENSPMEG00000020602rpa110082.843ENSTNIG00000016199rpa19982.951Tetraodon_nigroviridis
ENSPMEG00000020602rpa17870.227ENSTBEG00000002709RPA17470.227Tupaia_belangeri
ENSPMEG00000020602rpa19961.698ENSTTRG00000001169RPA19962.052Tursiops_truncatus
ENSPMEG00000020602rpa19865.217ENSUAMG00000015676RPA19571.154Ursus_americanus
ENSPMEG00000020602rpa19964.286ENSUMAG00000009328RPA19963.218Ursus_maritimus
ENSPMEG00000020602rpa19961.217ENSVPAG00000009443RPA19960.163Vicugna_pacos
ENSPMEG00000020602rpa19963.620ENSVVUG00000021715RPA19962.623Vulpes_vulpes
ENSPMEG00000020602rpa110066.372ENSXETG00000013538rpa19966.998Xenopus_tropicalis
ENSPMEG00000020602rpa19961.360ENSXCOG00000009899-9961.257Xiphophorus_couchianus
ENSPMEG00000020602rpa19394.624ENSXCOG00000010068rpa19494.624Xiphophorus_couchianus
ENSPMEG00000020602rpa110095.667ENSXMAG00000004102rpa110095.699Xiphophorus_maculatus
ENSPMEG00000020602rpa19368.807ENSXMAG00000010333RPA18168.807Xiphophorus_maculatus

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