EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMEG00000020674 (Gene tree)
Gene ID: 106904102
Gene Symbol: SNRPN
Alias: -
Full Name: small nuclear ribonucleoprotein-associated protein B'
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Minus strand
Length: 14819 bases
Position: chrKQ552880.1:51880-66698
Accession: 106904102
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000017808	LSM	PF01423.22	6.9e-19	1	1
ENSPMEP00000017801	LSM	PF01423.22	1e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000026744	SNRPN-201	1399	XM_014968254	ENSPMEP00000017808	240 (aa)	XP_014823740	UPI0004444BB9
ENSPMET00000033944	SNRPN-202	1597	-	ENSPMEP00000017801	232 (aa)	-	-

Gene Model

Click here to download ENSPMEG00000020674's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000020674's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000020674	SNRPN	70	93.491	ENSG00000128739	SNRPN	100	96.610	Homo_sapiens
ENSPMEG00000020674	SNRPN	69	93.413	ENSAMEG00000007034	SNRPN	70	92.442	Ailuropoda_melanoleuca
ENSPMEG00000020674	SNRPN	97	78.125	ENSANAG00000034241	SNRPN	72	93.642	Aotus_nancymaae
ENSPMEG00000020674	SNRPN	75	91.257	ENSBTAG00000008251	SNRPN	74	92.121	Bos_taurus
ENSPMEG00000020674	SNRPN	69	92.857	ENSCJAG00000042622	-	72	91.908	Callithrix_jacchus
ENSPMEG00000020674	SNRPN	69	93.452	ENSCJAG00000003759	-	72	93.642	Callithrix_jacchus
ENSPMEG00000020674	SNRPN	69	93.452	ENSCAFG00000010127	SNRPN	72	92.486	Canis_familiaris
ENSPMEG00000020674	SNRPN	69	93.452	ENSCAFG00020024075	SNRPN	72	92.486	Canis_lupus_dingo
ENSPMEG00000020674	SNRPN	75	91.257	ENSCHIG00000017477	SNRPN	75	92.486	Capra_hircus
ENSPMEG00000020674	SNRPN	69	93.452	ENSTSYG00000005248	SNRPN	72	93.642	Carlito_syrichta
ENSPMEG00000020674	SNRPN	69	93.452	ENSCAPG00000003047	SNRPN	72	93.642	Cavia_aperea
ENSPMEG00000020674	SNRPN	69	93.452	ENSCPOG00000020270	SNRPN	72	93.642	Cavia_porcellus
ENSPMEG00000020674	SNRPN	69	93.452	ENSCCAG00000024231	SNRPN	72	93.642	Cebus_capucinus
ENSPMEG00000020674	SNRPN	69	93.452	ENSCATG00000032518	SNRPN	72	93.642	Cercocebus_atys
ENSPMEG00000020674	SNRPN	69	93.452	ENSCLAG00000011376	SNRPN	72	93.642	Chinchilla_lanigera
ENSPMEG00000020674	SNRPN	69	93.452	ENSCSAG00000006406	SNRPN	72	93.642	Chlorocebus_sabaeus
ENSPMEG00000020674	SNRPN	68	93.125	ENSCHOG00000001846	SNRPN	63	92.216	Choloepus_hoffmanni
ENSPMEG00000020674	SNRPN	69	93.452	ENSCANG00000041156	SNRPN	72	93.642	Colobus_angolensis_palliatus
ENSPMEG00000020674	SNRPN	69	92.857	ENSCGRG00001004136	Snrpn	72	91.908	Cricetulus_griseus_chok1gshd
ENSPMEG00000020674	SNRPN	69	93.452	ENSCGRG00000001621	Snrpn	72	93.642	Cricetulus_griseus_crigri
ENSPMEG00000020674	SNRPN	100	99.170	ENSCVAG00000014193	SNRPN	100	99.170	Cyprinodon_variegatus
ENSPMEG00000020674	SNRPN	69	92.814	ENSDNOG00000037060	SNRPN	70	93.023	Dasypus_novemcinctus
ENSPMEG00000020674	SNRPN	69	93.452	ENSDORG00000004527	Snrpn	72	93.642	Dipodomys_ordii
ENSPMEG00000020674	SNRPN	69	93.452	ENSEASG00005017871	SNRPN	72	92.486	Equus_asinus_asinus
ENSPMEG00000020674	SNRPN	69	93.452	ENSECAG00000018148	SNRPN	72	92.486	Equus_caballus
ENSPMEG00000020674	SNRPN	69	92.814	ENSEEUG00000007440	-	72	93.023	Erinaceus_europaeus
ENSPMEG00000020674	SNRPN	69	93.452	ENSFCAG00000022298	-	73	92.486	Felis_catus
ENSPMEG00000020674	SNRPN	69	93.452	ENSFDAG00000016578	-	72	93.642	Fukomys_damarensis
ENSPMEG00000020674	SNRPN	75	81.667	ENSGMOG00000018161	SNRPN	76	81.871	Gadus_morhua
ENSPMEG00000020674	SNRPN	60	79.856	ENSGGOG00000024469	-	69	81.022	Gorilla_gorilla
ENSPMEG00000020674	SNRPN	69	93.452	ENSGGOG00000003988	SNRPN	72	93.642	Gorilla_gorilla
ENSPMEG00000020674	SNRPN	99	73.750	ENSHGLG00000002327	-	70	78.035	Heterocephalus_glaber_female
ENSPMEG00000020674	SNRPN	86	81.643	ENSHGLG00000019812	-	72	90.643	Heterocephalus_glaber_female
ENSPMEG00000020674	SNRPN	69	93.452	ENSHGLG00000011924	SNRPN	72	93.642	Heterocephalus_glaber_female
ENSPMEG00000020674	SNRPN	98	72.340	ENSHGLG00000020936	-	77	79.775	Heterocephalus_glaber_female
ENSPMEG00000020674	SNRPN	69	93.452	ENSHGLG00100016559	SNRPN	72	93.642	Heterocephalus_glaber_male
ENSPMEG00000020674	SNRPN	86	81.643	ENSHGLG00100021056	-	72	90.643	Heterocephalus_glaber_male
ENSPMEG00000020674	SNRPN	99	75.314	ENSHGLG00100004881	-	70	77.326	Heterocephalus_glaber_male
ENSPMEG00000020674	SNRPN	69	93.452	ENSSTOG00000001339	SNRPN	72	93.642	Ictidomys_tridecemlineatus
ENSPMEG00000020674	SNRPN	69	93.413	ENSLAFG00000009458	SNRPN	72	93.605	Loxodonta_africana
ENSPMEG00000020674	SNRPN	69	93.452	ENSMFAG00000042235	SNRPN	72	93.642	Macaca_fascicularis
ENSPMEG00000020674	SNRPN	69	93.452	ENSMMUG00000023139	SNURF	72	93.642	Macaca_mulatta
ENSPMEG00000020674	SNRPN	69	93.452	ENSMNEG00000031291	SNRPN	72	93.642	Macaca_nemestrina
ENSPMEG00000020674	SNRPN	69	93.452	ENSMLEG00000038837	SNRPN	72	93.642	Mandrillus_leucophaeus
ENSPMEG00000020674	SNRPN	65	96.078	ENSMGAG00000008696	SNRPN	72	87.791	Meleagris_gallopavo
ENSPMEG00000020674	SNRPN	69	93.452	ENSMAUG00000000051	Snrpn	76	92.486	Mesocricetus_auratus
ENSPMEG00000020674	SNRPN	69	93.452	ENSMICG00000042356	SNRPN	72	93.642	Microcebus_murinus
ENSPMEG00000020674	SNRPN	69	93.452	ENSMOCG00000015350	Snrpn	72	93.642	Microtus_ochrogaster
ENSPMEG00000020674	SNRPN	69	95.238	ENSMODG00000013926	-	72	94.220	Monodelphis_domestica
ENSPMEG00000020674	SNRPN	69	93.452	MGP_CAROLIEiJ_G0029815	Snrpn	72	93.642	Mus_caroli
ENSPMEG00000020674	SNRPN	69	93.452	ENSMUSG00000102252	Snrpn	72	93.642	Mus_musculus
ENSPMEG00000020674	SNRPN	69	93.452	MGP_PahariEiJ_G0013040	Snrpn	72	93.642	Mus_pahari
ENSPMEG00000020674	SNRPN	69	93.452	MGP_SPRETEiJ_G0030918	Snrpn	72	93.642	Mus_spretus
ENSPMEG00000020674	SNRPN	69	93.452	ENSMPUG00000014638	-	72	92.486	Mustela_putorius_furo
ENSPMEG00000020674	SNRPN	74	57.459	ENSMPUG00000007115	-	64	68.310	Mustela_putorius_furo
ENSPMEG00000020674	SNRPN	68	59.748	ENSMLUG00000025849	-	58	66.667	Myotis_lucifugus
ENSPMEG00000020674	SNRPN	69	93.413	ENSMLUG00000023361	-	70	92.442	Myotis_lucifugus
ENSPMEG00000020674	SNRPN	61	68.310	ENSMLUG00000024428	-	64	66.906	Myotis_lucifugus
ENSPMEG00000020674	SNRPN	69	93.452	ENSNGAG00000000181	Snrpn	72	93.642	Nannospalax_galili
ENSPMEG00000020674	SNRPN	92	73.543	ENSNLEG00000001376	SNRPN	71	71.676	Nomascus_leucogenys
ENSPMEG00000020674	SNRPN	69	92.857	ENSODEG00000019708	-	73	93.064	Octodon_degus
ENSPMEG00000020674	SNRPN	69	93.452	ENSODEG00000013478	-	72	93.642	Octodon_degus
ENSPMEG00000020674	SNRPN	69	92.857	ENSODEG00000020110	-	72	93.064	Octodon_degus
ENSPMEG00000020674	SNRPN	98	74.348	ENSODEG00000016065	-	65	89.583	Octodon_degus
ENSPMEG00000020674	SNRPN	88	86.111	ENSOCUG00000003532	-	72	93.642	Oryctolagus_cuniculus
ENSPMEG00000020674	SNRPN	100	99.167	ENSORLG00020007490	SNRPN	100	99.167	Oryzias_latipes_hni
ENSPMEG00000020674	SNRPN	100	99.167	ENSORLG00015003332	SNRPN	100	99.167	Oryzias_latipes_hsok
ENSPMEG00000020674	SNRPN	100	98.750	ENSOMEG00000002066	SNRPN	100	98.750	Oryzias_melastigma
ENSPMEG00000020674	SNRPN	69	93.452	ENSOGAG00000007392	SNRPN	72	93.642	Otolemur_garnettii
ENSPMEG00000020674	SNRPN	75	91.257	ENSOARG00000009080	SNRPN	72	93.642	Ovis_aries
ENSPMEG00000020674	SNRPN	98	63.319	ENSPPAG00000034049	-	63	79.137	Pan_paniscus
ENSPMEG00000020674	SNRPN	69	93.452	ENSPPAG00000027650	SNRPN	72	93.642	Pan_paniscus
ENSPMEG00000020674	SNRPN	69	93.452	ENSPPRG00000019878	-	72	92.486	Panthera_pardus
ENSPMEG00000020674	SNRPN	88	61.165	ENSPPRG00000006957	-	75	66.667	Panthera_pardus
ENSPMEG00000020674	SNRPN	69	94.643	ENSPTIG00000004537	SNRPN	72	93.642	Panthera_tigris_altaica
ENSPMEG00000020674	SNRPN	98	63.755	ENSPTRG00000052400	-	63	79.856	Pan_troglodytes
ENSPMEG00000020674	SNRPN	69	93.452	ENSPTRG00000006826	SNRPN	72	93.642	Pan_troglodytes
ENSPMEG00000020674	SNRPN	69	93.452	ENSPANG00000020142	SNRPN	72	93.642	Papio_anubis
ENSPMEG00000020674	SNRPN	69	93.452	ENSPEMG00000012911	-	72	93.642	Peromyscus_maniculatus_bairdii
ENSPMEG00000020674	SNRPN	69	91.071	ENSPEMG00000020979	-	72	90.173	Peromyscus_maniculatus_bairdii
ENSPMEG00000020674	SNRPN	69	77.976	ENSPEMG00000013920	-	70	79.769	Peromyscus_maniculatus_bairdii
ENSPMEG00000020674	SNRPN	69	92.814	ENSPCIG00000004699	-	55	93.023	Phascolarctos_cinereus
ENSPMEG00000020674	SNRPN	69	93.452	ENSPPYG00000006269	SNURF	72	93.642	Pongo_abelii
ENSPMEG00000020674	SNRPN	69	93.452	ENSPCOG00000014231	SNRPN	72	93.642	Propithecus_coquereli
ENSPMEG00000020674	SNRPN	69	93.452	ENSRNOG00000059764	Snrpn	72	93.642	Rattus_norvegicus
ENSPMEG00000020674	SNRPN	69	93.452	ENSRBIG00000041765	SNRPN	72	93.642	Rhinopithecus_bieti
ENSPMEG00000020674	SNRPN	69	93.452	ENSRROG00000035157	SNRPN	72	93.642	Rhinopithecus_roxellana
ENSPMEG00000020674	SNRPN	75	90.710	ENSSBOG00000024929	-	72	93.064	Saimiri_boliviensis_boliviensis
ENSPMEG00000020674	SNRPN	69	93.452	ENSSBOG00000000110	-	72	93.642	Saimiri_boliviensis_boliviensis
ENSPMEG00000020674	SNRPN	69	92.262	ENSSHAG00000010257	-	71	92.486	Sarcophilus_harrisii
ENSPMEG00000020674	SNRPN	98	70.293	ENSSARG00000000072	SNRPN	99	70.293	Sorex_araneus
ENSPMEG00000020674	SNRPN	69	93.452	ENSSSCG00000028124	SNRPN	75	92.486	Sus_scrofa
ENSPMEG00000020674	SNRPN	75	91.257	ENSTTRG00000010966	SNRPN	64	92.486	Tursiops_truncatus
ENSPMEG00000020674	SNRPN	68	93.125	ENSUAMG00000016284	SNRPN	58	92.216	Ursus_americanus
ENSPMEG00000020674	SNRPN	69	93.452	ENSUMAG00000025589	SNRPN	72	92.486	Ursus_maritimus
ENSPMEG00000020674	SNRPN	69	93.452	ENSVVUG00000017971	SNRPN	71	92.486	Vulpes_vulpes