EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMEG00000020729 (Gene tree)
Gene ID: 106919217
Gene Symbol: si:ch211-244b2.4
Alias: -
Full Name: uncharacterized LOC106919217
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Minus strand
Length: 4403 bases
Position: chrKQ551331.1:86133-90535
Accession: 106919217
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000017855	zf-CCCH	PF00642.24	1.2e-09	1	2
ENSPMEP00000017855	zf-CCCH	PF00642.24	1.2e-09	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000026805	-	2085	XM_014989442	ENSPMEP00000017855	359 (aa)	XP_014844928	UPI00072EDDB3

Gene Model

Click here to download ENSPMEG00000020729's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000020729's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000020729	si:ch211-244b2.4	100	65.278	ENSAPEG00000007620	si:ch211-244b2.4	90	66.563	Amphiprion_percula
ENSPMEG00000020729	si:ch211-244b2.4	97	58.217	ENSACLG00000022403	si:ch211-244b2.4	88	62.975	Astatotilapia_calliptera
ENSPMEG00000020729	si:ch211-244b2.4	100	72.500	ENSFHEG00000004642	si:ch211-244b2.4	90	73.375	Fundulus_heteroclitus
ENSPMEG00000020729	si:ch211-244b2.4	97	58.873	ENSHBUG00000019440	si:ch211-244b2.4	89	62.975	Haplochromis_burtoni
ENSPMEG00000020729	si:ch211-244b2.4	64	68.398	ENSKMAG00000009331	si:ch211-244b2.4	71	71.144	Kryptolebias_marmoratus
ENSPMEG00000020729	si:ch211-244b2.4	100	61.832	ENSLBEG00000016973	si:ch211-244b2.4	90	60.308	Labrus_bergylta
ENSPMEG00000020729	si:ch211-244b2.4	87	43.034	ENSLACG00000012806	-	100	42.724	Latimeria_chalumnae
ENSPMEG00000020729	si:ch211-244b2.4	97	57.576	ENSMZEG00005005397	si:ch211-244b2.4	87	62.975	Maylandia_zebra
ENSPMEG00000020729	si:ch211-244b2.4	91	49.855	ENSNBRG00000007103	si:ch211-244b2.4	82	54.027	Neolamprologus_brichardi
ENSPMEG00000020729	si:ch211-244b2.4	100	55.096	ENSORLG00000015345	si:ch211-244b2.4	87	59.621	Oryzias_latipes
ENSPMEG00000020729	si:ch211-244b2.4	96	56.069	ENSORLG00020013462	si:ch211-244b2.4	87	58.991	Oryzias_latipes_hni
ENSPMEG00000020729	si:ch211-244b2.4	100	55.096	ENSORLG00015011985	si:ch211-244b2.4	87	59.621	Oryzias_latipes_hsok
ENSPMEG00000020729	si:ch211-244b2.4	99	56.546	ENSOMEG00000006058	si:ch211-244b2.4	89	60.252	Oryzias_melastigma
ENSPMEG00000020729	si:ch211-244b2.4	99	98.034	ENSPFOG00000008262	si:ch211-244b2.4	99	98.034	Poecilia_formosa
ENSPMEG00000020729	si:ch211-244b2.4	100	97.230	ENSPLAG00000010029	si:ch211-244b2.4	100	97.230	Poecilia_latipinna
ENSPMEG00000020729	si:ch211-244b2.4	92	79.394	ENSPREG00000001561	si:ch211-244b2.4	92	77.950	Poecilia_reticulata
ENSPMEG00000020729	si:ch211-244b2.4	96	58.708	ENSPNYG00000001424	si:ch211-244b2.4	87	62.975	Pundamilia_nyererei
ENSPMEG00000020729	si:ch211-244b2.4	100	57.735	ENSSMAG00000002425	si:ch211-244b2.4	90	59.627	Scophthalmus_maximus