EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPMEG00000020856 (Gene tree)
Gene ID
106904895
Gene Symbol
pabpn1
Alias
-
Full Name
poly(A) binding protein nuclear 1
Gene Type
protein_coding
Species
Poecilia_mexicana
Status
putative
Strand
Plus strand
Length
14658 bases
Position
chrKQ553019.1:67677-82334
Accession
106904895
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPMEP00000032768RRM_1PF00076.222.5e-1711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPMET00000026960-4382XM_014969415ENSPMEP00000032768234 (aa)XP_014824901UPI0004445E34
Gene Model
Click here to download ENSPMEG00000020856's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000020856's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPMEG00000020856pabpn16361.438ENSPMEG00000009108PABPN1L5962.581
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPMEG00000020856pabpn19971.368ENSG00000258643BCL2L2-PABPN17069.658Homo_sapiens
ENSPMEG00000020856pabpn18680.676ENSG00000100836PABPN19478.107Homo_sapiens
ENSPMEG00000020856pabpn110097.009ENSAPOG00000016425pabpn110097.009Acanthochromis_polyacanthus
ENSPMEG00000020856pabpn18182.723ENSAMEG00000007048BCL2L2-PABPN110080.628Ailuropoda_melanoleuca
ENSPMEG00000020856pabpn19494.619ENSACIG00000021744pabpn110096.629Amphilophus_citrinellus
ENSPMEG00000020856pabpn110097.009ENSAOCG00000015805pabpn110097.009Amphiprion_ocellaris
ENSPMEG00000020856pabpn110097.009ENSAPEG00000009623pabpn110097.009Amphiprion_percula
ENSPMEG00000020856pabpn110097.436ENSATEG00000020531pabpn110097.436Anabas_testudineus
ENSPMEG00000020856pabpn18185.864ENSACAG00000006185-8170.954Anolis_carolinensis
ENSPMEG00000020856pabpn19967.611ENSANAG00000024513-8472.428Aotus_nancymaae
ENSPMEG00000020856pabpn19494.196ENSACLG00000016374pabpn17592.627Astatotilapia_calliptera
ENSPMEG00000020856pabpn110096.154ENSAMXG00000000452pabpn110096.154Astyanax_mexicanus
ENSPMEG00000020856pabpn18276.410ENSBTAG00000050594-7671.622Bos_taurus
ENSPMEG00000020856pabpn18481.910ENSBTAG00000006884PABPN18666.415Bos_taurus
ENSPMEG00000020856pabpn18381.122ENSBTAG00000053753-7279.082Bos_taurus
ENSPMEG00000020856pabpn16158.904WBGene00003904pabp-27158.904Caenorhabditis_elegans
ENSPMEG00000020856pabpn19974.359ENSCJAG00000007960-8473.077Callithrix_jacchus
ENSPMEG00000020856pabpn17178.698ENSCJAG00000004407-8476.331Callithrix_jacchus
ENSPMEG00000020856pabpn18680.676ENSCAFG00000011482PABPN18667.925Canis_familiaris
ENSPMEG00000020856pabpn18680.676ENSCAFG00020007298-8667.547Canis_lupus_dingo
ENSPMEG00000020856pabpn18680.676ENSCAFG00020006651-8667.547Canis_lupus_dingo
ENSPMEG00000020856pabpn18680.676ENSCHIG00000012184PABPN18667.547Capra_hircus
ENSPMEG00000020856pabpn19971.368ENSTSYG00000033996BCL2L2-PABPN19478.107Carlito_syrichta
ENSPMEG00000020856pabpn16080.000ENSCAPG00000009461-9179.845Cavia_aperea
ENSPMEG00000020856pabpn18680.193ENSCPOG00000025574PABPN16878.095Cavia_porcellus
ENSPMEG00000020856pabpn19974.359ENSCCAG00000033954BCL2L2-PABPN18473.077Cebus_capucinus
ENSPMEG00000020856pabpn19974.359ENSCATG00000038536BCL2L2-PABPN18473.077Cercocebus_atys
ENSPMEG00000020856pabpn16580.263ENSCLAG00000012423PABPN15677.632Chinchilla_lanigera
ENSPMEG00000020856pabpn18679.227ENSCSAG00000016036PABPN16877.143Chlorocebus_sabaeus
ENSPMEG00000020856pabpn18971.564ENSCHOG00000004798BCL2L2-PABPN19267.873Choloepus_hoffmanni
ENSPMEG00000020856pabpn17183.432ENSCPBG00000026060-9480.473Chrysemys_picta_bellii
ENSPMEG00000020856pabpn19061.502ENSCING00000012468-7468.862Ciona_intestinalis
ENSPMEG00000020856pabpn17662.222ENSCSAVG00000002001-7371.545Ciona_savignyi
ENSPMEG00000020856pabpn18569.347ENSCANG00000030980-8761.925Colobus_angolensis_palliatus
ENSPMEG00000020856pabpn19971.368ENSCANG00000009750BCL2L2-PABPN19478.107Colobus_angolensis_palliatus
ENSPMEG00000020856pabpn18680.193ENSCGRG00001019696Pabpn19477.515Cricetulus_griseus_chok1gshd
ENSPMEG00000020856pabpn16290.476ENSCGRG00000011102Pabpn19091.034Cricetulus_griseus_crigri
ENSPMEG00000020856pabpn110095.726ENSCSEG00000008774pabpn110095.726Cynoglossus_semilaevis
ENSPMEG00000020856pabpn110097.009ENSCVAG00000003152pabpn110097.009Cyprinodon_variegatus
ENSPMEG00000020856pabpn18152.910ENSDARG00000087996pabpn1l7267.521Danio_rerio
ENSPMEG00000020856pabpn110094.872ENSDARG00000045373pabpn110093.590Danio_rerio
ENSPMEG00000020856pabpn18680.676ENSDNOG00000023682PABPN18667.547Dasypus_novemcinctus
ENSPMEG00000020856pabpn18679.710ENSDORG00000028966-8666.792Dipodomys_ordii
ENSPMEG00000020856pabpn15682.707ENSDORG00000023928-8581.967Dipodomys_ordii
ENSPMEG00000020856pabpn19757.265FBgn0005648Pabp28262.703Drosophila_melanogaster
ENSPMEG00000020856pabpn19972.766ENSEBUG00000002322pabpn19972.532Eptatretus_burgeri
ENSPMEG00000020856pabpn18680.676ENSEASG00005011716PABPN18667.547Equus_asinus_asinus
ENSPMEG00000020856pabpn18580.000ENSECAG00000011652PABPN17667.490Equus_caballus
ENSPMEG00000020856pabpn18678.261ENSEEUG00000012973-7172.381Erinaceus_europaeus
ENSPMEG00000020856pabpn110092.437ENSELUG00000022654pabpn110089.916Esox_lucius
ENSPMEG00000020856pabpn18680.676ENSFCAG00000031922PABPN18667.547Felis_catus
ENSPMEG00000020856pabpn17180.473ENSFDAG00000018381BCL2L2-PABPN19478.107Fukomys_damarensis
ENSPMEG00000020856pabpn110095.726ENSFHEG00000007215pabpn110095.726Fundulus_heteroclitus
ENSPMEG00000020856pabpn19591.892ENSGMOG00000003922pabpn17590.654Gadus_morhua
ENSPMEG00000020856pabpn18381.818ENSGALG00000052930-6181.517Gallus_gallus
ENSPMEG00000020856pabpn110098.718ENSGAFG00000017099pabpn110098.718Gambusia_affinis
ENSPMEG00000020856pabpn110091.903ENSGACG00000002167pabpn110091.903Gasterosteus_aculeatus
ENSPMEG00000020856pabpn19465.106ENSGGOG00000025919-6776.923Gorilla_gorilla
ENSPMEG00000020856pabpn18967.943ENSGGOG00000039675-9162.656Gorilla_gorilla
ENSPMEG00000020856pabpn19974.359ENSGGOG00000022683-8473.077Gorilla_gorilla
ENSPMEG00000020856pabpn110096.581ENSHBUG00000019523pabpn110096.581Haplochromis_burtoni
ENSPMEG00000020856pabpn18768.421ENSHGLG00000018588-7068.421Heterocephalus_glaber_female
ENSPMEG00000020856pabpn18680.193ENSHGLG00000002927-9191.034Heterocephalus_glaber_female
ENSPMEG00000020856pabpn17161.538ENSHGLG00000009842-9361.538Heterocephalus_glaber_female
ENSPMEG00000020856pabpn18768.421ENSHGLG00100015565-8761.200Heterocephalus_glaber_male
ENSPMEG00000020856pabpn19470.270ENSHGLG00100006673-9191.034Heterocephalus_glaber_male
ENSPMEG00000020856pabpn17168.391ENSHGLG00100018935-9470.349Heterocephalus_glaber_male
ENSPMEG00000020856pabpn110095.299ENSHCOG00000004655pabpn110095.299Hippocampus_comes
ENSPMEG00000020856pabpn110087.179ENSIPUG00000000180-9985.897Ictalurus_punctatus
ENSPMEG00000020856pabpn110095.299ENSIPUG00000008085PABPN110095.299Ictalurus_punctatus
ENSPMEG00000020856pabpn17180.473ENSSTOG00000029847BCL2L2-PABPN19478.107Ictidomys_tridecemlineatus
ENSPMEG00000020856pabpn17180.473ENSJJAG00000023507Gm205219478.107Jaculus_jaculus
ENSPMEG00000020856pabpn110096.596ENSKMAG00000018748pabpn110096.596Kryptolebias_marmoratus
ENSPMEG00000020856pabpn110097.436ENSLBEG00000027266pabpn110097.436Labrus_bergylta
ENSPMEG00000020856pabpn17685.000ENSLACG00000000646pabpn19176.056Latimeria_chalumnae
ENSPMEG00000020856pabpn19065.581ENSLOCG00000004694pabpn1l9962.326Lepisosteus_oculatus
ENSPMEG00000020856pabpn19592.377ENSLOCG00000000796pabpn17790.187Lepisosteus_oculatus
ENSPMEG00000020856pabpn16580.921ENSLAFG00000031227-10077.778Loxodonta_africana
ENSPMEG00000020856pabpn16172.727ENSMFAG00000031355-9971.329Macaca_fascicularis
ENSPMEG00000020856pabpn19971.368ENSMFAG00000032183BCL2L2-PABPN19478.107Macaca_fascicularis
ENSPMEG00000020856pabpn19971.368ENSMMUG00000014747BCL2L2-PABPN110077.703Macaca_mulatta
ENSPMEG00000020856pabpn18666.505ENSMMUG00000048382-6965.238Macaca_mulatta
ENSPMEG00000020856pabpn19974.359ENSMNEG00000045065BCL2L2-PABPN18473.077Macaca_nemestrina
ENSPMEG00000020856pabpn17967.553ENSMNEG00000035750-9971.329Macaca_nemestrina
ENSPMEG00000020856pabpn17264.881ENSMLEG00000034623-9969.231Mandrillus_leucophaeus
ENSPMEG00000020856pabpn19971.368ENSMLEG00000043862BCL2L2-PABPN19478.107Mandrillus_leucophaeus
ENSPMEG00000020856pabpn19996.104ENSMAMG00000007979pabpn17996.104Mastacembelus_armatus
ENSPMEG00000020856pabpn19596.396ENSMZEG00005011904pabpn17796.396Maylandia_zebra
ENSPMEG00000020856pabpn19971.368ENSMAUG00000007383Gm205217078.095Mesocricetus_auratus
ENSPMEG00000020856pabpn19974.894ENSMICG00000010002BCL2L2-PABPN18473.840Microcebus_murinus
ENSPMEG00000020856pabpn19970.940ENSMOCG00000018557Gm205218891.034Microtus_ochrogaster
ENSPMEG00000020856pabpn110097.009ENSMMOG00000005405pabpn110097.009Mola_mola
ENSPMEG00000020856pabpn18579.902ENSMODG00000004535-7967.078Monodelphis_domestica
ENSPMEG00000020856pabpn19996.537ENSMALG00000019612pabpn17896.537Monopterus_albus
ENSPMEG00000020856pabpn19970.940MGP_CAROLIEiJ_G0019276Gm205217069.231Mus_caroli
ENSPMEG00000020856pabpn18679.710MGP_CAROLIEiJ_G0019277Pabpn18891.034Mus_caroli
ENSPMEG00000020856pabpn18680.193ENSMUSG00000022194Pabpn18891.034Mus_musculus
ENSPMEG00000020856pabpn19971.368ENSMUSG00000092232Gm205217069.658Mus_musculus
ENSPMEG00000020856pabpn19971.368MGP_PahariEiJ_G0030294Gm205217069.658Mus_pahari
ENSPMEG00000020856pabpn18680.193MGP_PahariEiJ_G0030295Pabpn110095.238Mus_pahari
ENSPMEG00000020856pabpn18680.193MGP_SPRETEiJ_G0020166Pabpn18891.034Mus_spretus
ENSPMEG00000020856pabpn19971.368MGP_SPRETEiJ_G0020165Gm205217069.658Mus_spretus
ENSPMEG00000020856pabpn16680.255ENSMPUG00000006775-8779.592Mustela_putorius_furo
ENSPMEG00000020856pabpn18181.675ENSMLUG00000003800-10079.581Myotis_lucifugus
ENSPMEG00000020856pabpn18877.725ENSMLUG00000012452-6976.415Myotis_lucifugus
ENSPMEG00000020856pabpn18479.397ENSMLUG00000028677-8570.042Myotis_lucifugus
ENSPMEG00000020856pabpn19971.795ENSNGAG00000019529Gm205217070.085Nannospalax_galili
ENSPMEG00000020856pabpn19596.396ENSNBRG00000023955pabpn110096.629Neolamprologus_brichardi
ENSPMEG00000020856pabpn16458.667ENSNLEG00000035292-9958.000Nomascus_leucogenys
ENSPMEG00000020856pabpn19971.368ENSNLEG00000015007-7478.571Nomascus_leucogenys
ENSPMEG00000020856pabpn18667.633ENSNLEG00000030598-7767.619Nomascus_leucogenys
ENSPMEG00000020856pabpn17671.111ENSODEG00000011555-8968.047Octodon_degus
ENSPMEG00000020856pabpn18672.195ENSODEG00000003739-7070.673Octodon_degus
ENSPMEG00000020856pabpn19970.940ENSODEG00000002083BCL2L2-PABPN16878.095Octodon_degus
ENSPMEG00000020856pabpn19596.396ENSONIG00000008112pabpn17796.396Oreochromis_niloticus
ENSPMEG00000020856pabpn16383.108ENSOANG00000009218-10079.054Ornithorhynchus_anatinus
ENSPMEG00000020856pabpn18680.193ENSOCUG00000016174PABPN19567.424Oryctolagus_cuniculus
ENSPMEG00000020856pabpn19996.537ENSORLG00000027900pabpn19095.327Oryzias_latipes
ENSPMEG00000020856pabpn19996.537ENSORLG00020004681pabpn17896.537Oryzias_latipes_hni
ENSPMEG00000020856pabpn110097.009ENSORLG00015000018pabpn110097.009Oryzias_latipes_hsok
ENSPMEG00000020856pabpn19597.297ENSOMEG00000016618pabpn18297.285Oryzias_melastigma
ENSPMEG00000020856pabpn18680.676ENSOGAG00000008710PABPN18667.547Otolemur_garnettii
ENSPMEG00000020856pabpn19971.368ENSOARG00000019336BCL2L2-PABPN16469.658Ovis_aries
ENSPMEG00000020856pabpn19971.368ENSPPAG00000028984BCL2L2-PABPN18779.592Pan_paniscus
ENSPMEG00000020856pabpn17165.868ENSPPAG00000039421-9364.671Pan_paniscus
ENSPMEG00000020856pabpn18680.676ENSPPRG00000010567PABPN18667.547Panthera_pardus
ENSPMEG00000020856pabpn17180.473ENSPTIG00000001063BCL2L2-PABPN19478.107Panthera_tigris_altaica
ENSPMEG00000020856pabpn19974.359ENSPTRG00000006167BCL2L28473.077Pan_troglodytes
ENSPMEG00000020856pabpn110061.702ENSPTRG00000047273-9358.498Pan_troglodytes
ENSPMEG00000020856pabpn18467.839ENSPANG00000023326-9971.329Papio_anubis
ENSPMEG00000020856pabpn19974.359ENSPANG00000021100BCL2L2-PABPN18473.077Papio_anubis
ENSPMEG00000020856pabpn19993.074ENSPKIG00000008144-7891.775Paramormyrops_kingsleyae
ENSPMEG00000020856pabpn110091.026ENSPKIG00000018052pabpn110090.171Paramormyrops_kingsleyae
ENSPMEG00000020856pabpn16970.807ENSPKIG00000008340pabpn1l7471.812Paramormyrops_kingsleyae
ENSPMEG00000020856pabpn15875.000ENSPSIG00000011959-7885.047Pelodiscus_sinensis
ENSPMEG00000020856pabpn19596.847ENSPMGG00000022027pabpn18196.847Periophthalmus_magnuspinnatus
ENSPMEG00000020856pabpn19971.368ENSPEMG00000008332Gm205218891.034Peromyscus_maniculatus_bairdii
ENSPMEG00000020856pabpn17875.269ENSPMAG00000006212pabpn17775.789Petromyzon_marinus
ENSPMEG00000020856pabpn18680.676ENSPCIG00000027751-8667.170Phascolarctos_cinereus
ENSPMEG00000020856pabpn1100100.000ENSPFOG00000010351pabpn199100.000Poecilia_formosa
ENSPMEG00000020856pabpn19998.701ENSPLAG00000022696pabpn17998.701Poecilia_latipinna
ENSPMEG00000020856pabpn110099.573ENSPREG00000011278pabpn110099.573Poecilia_reticulata
ENSPMEG00000020856pabpn18180.513ENSPPYG00000005663PABPN18667.490Pongo_abelii
ENSPMEG00000020856pabpn17967.358ENSPCAG00000005902PABPN18256.327Procavia_capensis
ENSPMEG00000020856pabpn19974.894ENSPCOG00000028047BCL2L2-PABPN18473.840Propithecus_coquereli
ENSPMEG00000020856pabpn18879.048ENSPVAG00000005270PABPN16876.667Pteropus_vampyrus
ENSPMEG00000020856pabpn110096.581ENSPNYG00000013182pabpn110096.581Pundamilia_nyererei
ENSPMEG00000020856pabpn110095.726ENSPNAG00000023526pabpn110095.726Pygocentrus_nattereri
ENSPMEG00000020856pabpn18860.766ENSPNAG00000021666pabpn1l7871.069Pygocentrus_nattereri
ENSPMEG00000020856pabpn18680.193ENSRNOG00000042195Pabpn18567.681Rattus_norvegicus
ENSPMEG00000020856pabpn19470.721ENSRBIG00000040762BCL2L2-PABPN15282.249Rhinopithecus_bieti
ENSPMEG00000020856pabpn18869.524ENSRBIG00000042811-9564.035Rhinopithecus_bieti
ENSPMEG00000020856pabpn18969.953ENSRBIG00000039547-8263.556Rhinopithecus_bieti
ENSPMEG00000020856pabpn18866.038ENSRROG00000036409-7061.304Rhinopithecus_roxellana
ENSPMEG00000020856pabpn19470.721ENSRROG00000045535BCL2L2-PABPN19478.107Rhinopithecus_roxellana
ENSPMEG00000020856pabpn19465.333ENSRROG00000040409-8264.000Rhinopithecus_roxellana
ENSPMEG00000020856pabpn19967.611ENSSBOG00000026930BCL2L2-PABPN18779.592Saimiri_boliviensis_boliviensis
ENSPMEG00000020856pabpn19960.996ENSSHAG00000007707-9955.649Sarcophilus_harrisii
ENSPMEG00000020856pabpn18182.723ENSSHAG00000014841-8780.105Sarcophilus_harrisii
ENSPMEG00000020856pabpn16868.293ENSSFOG00015015833pabpn1l7768.675Scleropages_formosus
ENSPMEG00000020856pabpn110088.511ENSSFOG00015012565pabpn110087.234Scleropages_formosus
ENSPMEG00000020856pabpn110095.299ENSSFOG00015014718pabpn110095.299Scleropages_formosus
ENSPMEG00000020856pabpn110097.009ENSSMAG00000020157pabpn110097.009Scophthalmus_maximus
ENSPMEG00000020856pabpn19996.970ENSSDUG00000020582pabpn17896.970Seriola_dumerili
ENSPMEG00000020856pabpn110097.436ENSSLDG00000007118pabpn110097.436Seriola_lalandi_dorsalis
ENSPMEG00000020856pabpn17184.615ENSSPUG00000018308-9481.657Sphenodon_punctatus
ENSPMEG00000020856pabpn110095.745ENSSPAG00000021658pabpn110095.745Stegastes_partitus
ENSPMEG00000020856pabpn19971.368ENSSSCG00000002023PABPN18667.547Sus_scrofa
ENSPMEG00000020856pabpn19261.468ENSSSCG00000034805-7957.075Sus_scrofa
ENSPMEG00000020856pabpn110095.726ENSTRUG00000023664pabpn110095.726Takifugu_rubripes
ENSPMEG00000020856pabpn19291.244ENSTNIG00000005369pabpn19093.878Tetraodon_nigroviridis
ENSPMEG00000020856pabpn18680.676ENSUAMG00000024460PABPN16878.571Ursus_americanus
ENSPMEG00000020856pabpn19971.368ENSUMAG00000014288BCL2L2-PABPN17069.658Ursus_maritimus
ENSPMEG00000020856pabpn19971.368ENSVVUG00000019912BCL2L2-PABPN18175.598Vulpes_vulpes
ENSPMEG00000020856pabpn18284.103ENSXETG00000014597pabpn17380.734Xenopus_tropicalis
ENSPMEG00000020856pabpn17587.429ENSXCOG00000005158pabpn19887.429Xiphophorus_couchianus
ENSPMEG00000020856pabpn110099.145ENSXMAG00000006196pabpn110099.145Xiphophorus_maculatus

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