EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMEG00000020939 (Gene tree)
Gene ID: 106919209
Gene Symbol: -
Alias: -
Full Name: zinc finger protein 354C-like
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Plus strand
Length: 9939 bases
Position: chrKQ551330.1:323538-333476
Accession: 106919209
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000032816	zf-C2H2	PF00096.26	4.1e-20	1	3
ENSPMEP00000032816	zf-C2H2	PF00096.26	4.1e-20	2	3
ENSPMEP00000032816	zf-C2H2	PF00096.26	4.1e-20	3	3
ENSPMEP00000032816	zf-met	PF12874.7	1.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000027050	-	3180	XM_014989423	ENSPMEP00000032816	727 (aa)	XP_014844909	UPI00072EC05B

Gene Model

Click here to download ENSPMEG00000020939's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000020939's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMEG00000020939	-	52	39.286	ENSPMEG00000011704	-	89	39.286
ENSPMEG00000020939	-	50	35.354	ENSPMEG00000004595	-	92	32.278
ENSPMEG00000020939	-	55	32.308	ENSPMEG00000022755	si:dkey-77f5.14	72	32.308
ENSPMEG00000020939	-	53	30.939	ENSPMEG00000016762	-	81	31.250
ENSPMEG00000020939	-	55	30.583	ENSPMEG00000023113	-	58	30.583
ENSPMEG00000020939	-	54	32.836	ENSPMEG00000007589	-	75	34.307
ENSPMEG00000020939	-	50	30.594	ENSPMEG00000020553	-	72	30.594
ENSPMEG00000020939	-	50	38.776	ENSPMEG00000017910	-	81	38.776
ENSPMEG00000020939	-	53	30.702	ENSPMEG00000020862	-	86	30.702
ENSPMEG00000020939	-	53	33.520	ENSPMEG00000002304	-	87	33.520
ENSPMEG00000020939	-	54	33.333	ENSPMEG00000005885	-	83	33.333
ENSPMEG00000020939	-	53	30.341	ENSPMEG00000014109	-	83	30.650
ENSPMEG00000020939	-	56	30.793	ENSPMEG00000018673	-	87	30.597
ENSPMEG00000020939	-	51	30.769	ENSPMEG00000016478	-	69	30.769
ENSPMEG00000020939	-	52	34.568	ENSPMEG00000006726	-	88	34.568
ENSPMEG00000020939	-	53	34.337	ENSPMEG00000020571	-	68	34.337
ENSPMEG00000020939	-	58	31.034	ENSPMEG00000005897	-	61	31.034
ENSPMEG00000020939	-	50	32.773	ENSPMEG00000020849	-	64	32.773
ENSPMEG00000020939	-	56	31.088	ENSPMEG00000023193	-	60	31.088
ENSPMEG00000020939	-	51	34.579	ENSPMEG00000020647	-	71	30.415
ENSPMEG00000020939	-	53	30.303	ENSPMEG00000015850	-	91	30.075
ENSPMEG00000020939	-	51	31.776	ENSPMEG00000018676	-	89	32.124
ENSPMEG00000020939	-	54	30.573	ENSPMEG00000011517	-	97	33.333
ENSPMEG00000020939	-	53	32.487	ENSPMEG00000024091	-	73	36.486

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000020939	-	50	30.973	ENSAPOG00000022174	-	80	38.182	Acanthochromis_polyacanthus
ENSPMEG00000020939	-	56	33.129	ENSAOCG00000013978	-	63	33.129	Amphiprion_ocellaris
ENSPMEG00000020939	-	54	36.986	ENSAPEG00000013550	-	94	32.164	Amphiprion_percula
ENSPMEG00000020939	-	62	32.099	ENSAPEG00000012217	-	66	32.099	Amphiprion_percula
ENSPMEG00000020939	-	54	30.769	ENSCSAVG00000006608	-	99	36.458	Ciona_savignyi
ENSPMEG00000020939	-	53	30.345	FBgn0020309	crol	52	30.370	Drosophila_melanogaster
ENSPMEG00000020939	-	50	45.283	ENSEBUG00000006233	-	57	45.283	Eptatretus_burgeri
ENSPMEG00000020939	-	56	33.333	ENSEBUG00000015456	-	90	33.333	Eptatretus_burgeri
ENSPMEG00000020939	-	57	37.037	ENSFHEG00000005983	-	73	37.037	Fundulus_heteroclitus
ENSPMEG00000020939	-	52	41.509	ENSFHEG00000005993	-	73	41.509	Fundulus_heteroclitus
ENSPMEG00000020939	-	54	31.679	ENSFHEG00000021003	-	66	30.796	Fundulus_heteroclitus
ENSPMEG00000020939	-	51	36.585	ENSGAFG00000011999	-	77	36.585	Gambusia_affinis
ENSPMEG00000020939	-	52	33.889	ENSLACG00000017381	-	97	33.889	Latimeria_chalumnae
ENSPMEG00000020939	-	51	30.667	ENSORLG00000027186	-	82	30.667	Oryzias_latipes
ENSPMEG00000020939	-	50	33.750	ENSORLG00000022699	-	80	30.573	Oryzias_latipes
ENSPMEG00000020939	-	50	30.743	ENSORLG00020009943	-	83	32.639	Oryzias_latipes_hni
ENSPMEG00000020939	-	57	36.364	ENSORLG00020017164	-	99	30.294	Oryzias_latipes_hni
ENSPMEG00000020939	-	52	35.455	ENSORLG00015012776	-	96	30.284	Oryzias_latipes_hsok
ENSPMEG00000020939	-	52	31.429	ENSORLG00015011730	-	76	31.429	Oryzias_latipes_hsok
ENSPMEG00000020939	-	51	30.169	ENSORLG00015012339	-	93	33.083	Oryzias_latipes_hsok
ENSPMEG00000020939	-	50	39.024	ENSOMEG00000010371	-	96	39.024	Oryzias_melastigma
ENSPMEG00000020939	-	59	34.615	ENSOMEG00000013677	-	73	41.250	Oryzias_melastigma
ENSPMEG00000020939	-	55	30.556	ENSOMEG00000013386	-	65	30.556	Oryzias_melastigma
ENSPMEG00000020939	-	53	31.609	ENSOMEG00000016747	-	77	31.609	Oryzias_melastigma
ENSPMEG00000020939	-	50	32.768	ENSOMEG00000002639	-	95	32.768	Oryzias_melastigma
ENSPMEG00000020939	-	50	36.471	ENSOMEG00000015103	-	88	36.471	Oryzias_melastigma
ENSPMEG00000020939	-	51	35.417	ENSOMEG00000018691	-	83	35.417	Oryzias_melastigma
ENSPMEG00000020939	-	57	30.570	ENSOMEG00000019179	-	94	35.238	Oryzias_melastigma
ENSPMEG00000020939	-	54	32.386	ENSOMEG00000010638	-	82	32.386	Oryzias_melastigma
ENSPMEG00000020939	-	57	32.335	ENSOMEG00000006511	-	69	32.317	Oryzias_melastigma
ENSPMEG00000020939	-	54	32.759	ENSOMEG00000019519	-	77	32.759	Oryzias_melastigma
ENSPMEG00000020939	-	50	35.484	ENSOMEG00000009568	-	100	38.298	Oryzias_melastigma
ENSPMEG00000020939	-	50	30.636	ENSOMEG00000016295	-	73	30.588	Oryzias_melastigma
ENSPMEG00000020939	-	63	30.275	ENSOMEG00000011566	-	85	34.091	Oryzias_melastigma
ENSPMEG00000020939	-	54	44.444	ENSOMEG00000008449	-	98	36.434	Oryzias_melastigma
ENSPMEG00000020939	-	53	30.601	ENSPMAG00000000401	-	89	31.481	Petromyzon_marinus
ENSPMEG00000020939	-	58	30.189	ENSPFOG00000007333	-	75	30.189	Poecilia_formosa
ENSPMEG00000020939	-	60	30.000	ENSPFOG00000001053	-	100	33.333	Poecilia_formosa
ENSPMEG00000020939	-	66	95.258	ENSPFOG00000024288	-	96	95.258	Poecilia_formosa
ENSPMEG00000020939	-	50	34.615	ENSPFOG00000021869	-	72	34.615	Poecilia_formosa
ENSPMEG00000020939	-	100	97.397	ENSPLAG00000005836	-	100	97.397	Poecilia_latipinna
ENSPMEG00000020939	-	55	31.073	ENSPLAG00000008529	-	97	32.727	Poecilia_latipinna
ENSPMEG00000020939	-	50	30.072	ENSPREG00000013780	-	90	33.333	Poecilia_reticulata
ENSPMEG00000020939	-	54	32.558	ENSSFOG00015021831	-	88	32.558	Scleropages_formosus
ENSPMEG00000020939	-	51	46.296	ENSXCOG00000012458	-	60	46.296	Xiphophorus_couchianus