EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMEG00000021020 (Gene tree)
Gene ID: 106923873
Gene Symbol: cmss1
Alias: -
Full Name: cms1 ribosomal small subunit homolog
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Plus strand
Length: 36364 bases
Position: chrKQ551642.1:47203-83566
Accession: 106923873
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000018122	CMS1	PF14617.6	3.5e-33	1	1
ENSPMEP00000018122	DEAD	PF00270.29	1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000027154	-	961	XM_014997235	ENSPMEP00000018122	288 (aa)	XP_014852721	UPI00072E7820

Gene Model

Click here to download ENSPMEG00000021020's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000021020's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000021020	cmss1	100	52.759	ENSG00000184220	CMSS1	98	66.250	Homo_sapiens
ENSPMEG00000021020	cmss1	94	67.778	ENSAPOG00000010604	cmss1	96	72.031	Acanthochromis_polyacanthus
ENSPMEG00000021020	cmss1	88	56.299	ENSAMEG00000004092	CMSS1	78	62.562	Ailuropoda_melanoleuca
ENSPMEG00000021020	cmss1	92	74.621	ENSACIG00000021854	cmss1	98	74.713	Amphilophus_citrinellus
ENSPMEG00000021020	cmss1	100	77.663	ENSAOCG00000013361	cmss1	100	78.694	Amphiprion_ocellaris
ENSPMEG00000021020	cmss1	100	78.351	ENSAPEG00000005829	cmss1	100	79.038	Amphiprion_percula
ENSPMEG00000021020	cmss1	100	74.828	ENSATEG00000008209	cmss1	100	75.517	Anabas_testudineus
ENSPMEG00000021020	cmss1	70	60.396	ENSAPLG00000010542	CMSS1	88	60.396	Anas_platyrhynchos
ENSPMEG00000021020	cmss1	97	52.878	ENSACAG00000011065	CMSS1	74	62.376	Anolis_carolinensis
ENSPMEG00000021020	cmss1	100	52.431	ENSANAG00000023565	CMSS1	100	49.342	Aotus_nancymaae
ENSPMEG00000021020	cmss1	100	76.712	ENSACLG00000027294	cmss1	100	78.082	Astatotilapia_calliptera
ENSPMEG00000021020	cmss1	100	55.782	ENSAMXG00000002046	cmss1	100	55.782	Astyanax_mexicanus
ENSPMEG00000021020	cmss1	100	52.159	ENSBTAG00000013663	CMSS1	100	50.987	Bos_taurus
ENSPMEG00000021020	cmss1	100	53.819	ENSCJAG00000000610	CMSS1	100	50.658	Callithrix_jacchus
ENSPMEG00000021020	cmss1	70	62.376	ENSCAFG00000009230	CMSS1	73	62.376	Canis_familiaris
ENSPMEG00000021020	cmss1	86	56.225	ENSCAFG00020009464	-	74	62.376	Canis_lupus_dingo
ENSPMEG00000021020	cmss1	70	60.396	ENSCAFG00020024156	-	63	60.396	Canis_lupus_dingo
ENSPMEG00000021020	cmss1	70	63.366	ENSCHIG00000013003	CMSS1	73	63.366	Capra_hircus
ENSPMEG00000021020	cmss1	83	58.750	ENSTSYG00000009266	CMSS1	78	62.871	Carlito_syrichta
ENSPMEG00000021020	cmss1	78	51.556	ENSCAPG00000013584	CMSS1	88	56.614	Cavia_aperea
ENSPMEG00000021020	cmss1	100	54.514	ENSCPOG00000014680	CMSS1	100	55.017	Cavia_porcellus
ENSPMEG00000021020	cmss1	100	53.125	ENSCCAG00000034685	CMSS1	100	50.000	Cebus_capucinus
ENSPMEG00000021020	cmss1	100	53.103	ENSCATG00000031980	CMSS1	100	50.164	Cercocebus_atys
ENSPMEG00000021020	cmss1	69	62.500	ENSCLAG00000011241	CMSS1	87	62.871	Chinchilla_lanigera
ENSPMEG00000021020	cmss1	70	63.366	ENSCSAG00000006024	CMSS1	82	63.366	Chlorocebus_sabaeus
ENSPMEG00000021020	cmss1	100	40.484	ENSCHOG00000012098	CMSS1	73	47.030	Choloepus_hoffmanni
ENSPMEG00000021020	cmss1	67	44.898	ENSCING00000014848	-	99	45.455	Ciona_intestinalis
ENSPMEG00000021020	cmss1	100	53.103	ENSCANG00000031337	CMSS1	100	50.164	Colobus_angolensis_palliatus
ENSPMEG00000021020	cmss1	100	51.389	ENSCGRG00001014305	Cmss1	100	48.973	Cricetulus_griseus_chok1gshd
ENSPMEG00000021020	cmss1	70	61.386	ENSCGRG00000006722	Cmss1	79	61.386	Cricetulus_griseus_crigri
ENSPMEG00000021020	cmss1	100	68.707	ENSCSEG00000004958	cmss1	100	69.388	Cynoglossus_semilaevis
ENSPMEG00000021020	cmss1	100	83.681	ENSCVAG00000005039	cmss1	100	83.681	Cyprinodon_variegatus
ENSPMEG00000021020	cmss1	100	58.362	ENSDARG00000112579	cmss1	100	58.362	Danio_rerio
ENSPMEG00000021020	cmss1	70	62.376	ENSDNOG00000040418	CMSS1	73	62.376	Dasypus_novemcinctus
ENSPMEG00000021020	cmss1	100	53.819	ENSDORG00000010461	Cmss1	100	53.287	Dipodomys_ordii
ENSPMEG00000021020	cmss1	69	62.000	ENSEASG00005010966	CMSS1	92	62.376	Equus_asinus_asinus
ENSPMEG00000021020	cmss1	69	61.500	ENSECAG00000015662	CMSS1	89	61.881	Equus_caballus
ENSPMEG00000021020	cmss1	69	44.000	ENSEEUG00000007624	-	73	44.554	Erinaceus_europaeus
ENSPMEG00000021020	cmss1	100	59.076	ENSELUG00000019459	cmss1	100	59.736	Esox_lucius
ENSPMEG00000021020	cmss1	100	53.979	ENSFCAG00000044577	CMSS1	100	53.103	Felis_catus
ENSPMEG00000021020	cmss1	70	59.901	ENSFALG00000005816	CMSS1	85	59.901	Ficedula_albicollis
ENSPMEG00000021020	cmss1	70	63.366	ENSFDAG00000012577	CMSS1	89	63.366	Fukomys_damarensis
ENSPMEG00000021020	cmss1	81	86.638	ENSFHEG00000012008	cmss1	94	86.900	Fundulus_heteroclitus
ENSPMEG00000021020	cmss1	99	65.972	ENSGMOG00000016729	cmss1	100	65.625	Gadus_morhua
ENSPMEG00000021020	cmss1	70	61.386	ENSGALG00000015267	CMSS1	77	61.386	Gallus_gallus
ENSPMEG00000021020	cmss1	93	86.667	ENSGAFG00000021217	cmss1	97	85.551	Gambusia_affinis
ENSPMEG00000021020	cmss1	99	68.750	ENSGACG00000002798	cmss1	100	67.014	Gasterosteus_aculeatus
ENSPMEG00000021020	cmss1	98	51.957	ENSGAGG00000019861	CMSS1	79	63.366	Gopherus_agassizii
ENSPMEG00000021020	cmss1	70	62.871	ENSGGOG00000014125	CMSS1	77	62.871	Gorilla_gorilla
ENSPMEG00000021020	cmss1	100	75.685	ENSHBUG00000008431	cmss1	100	77.055	Haplochromis_burtoni
ENSPMEG00000021020	cmss1	69	62.000	ENSHGLG00000019481	CMSS1	92	59.565	Heterocephalus_glaber_female
ENSPMEG00000021020	cmss1	69	62.000	ENSHGLG00100010314	CMSS1	90	59.565	Heterocephalus_glaber_male
ENSPMEG00000021020	cmss1	100	63.000	ENSHCOG00000003222	cmss1	100	66.113	Hippocampus_comes
ENSPMEG00000021020	cmss1	100	59.396	ENSIPUG00000011591	cmss1	100	58.904	Ictalurus_punctatus
ENSPMEG00000021020	cmss1	100	53.125	ENSSTOG00000019366	CMSS1	100	51.211	Ictidomys_tridecemlineatus
ENSPMEG00000021020	cmss1	100	53.125	ENSJJAG00000014894	Cmss1	96	58.150	Jaculus_jaculus
ENSPMEG00000021020	cmss1	93	65.799	ENSKMAG00000002390	cmss1	96	64.093	Kryptolebias_marmoratus
ENSPMEG00000021020	cmss1	70	76.471	ENSLBEG00000006298	cmss1	83	76.471	Labrus_bergylta
ENSPMEG00000021020	cmss1	70	63.861	ENSLACG00000009293	CMSS1	88	63.861	Latimeria_chalumnae
ENSPMEG00000021020	cmss1	100	52.921	ENSLOCG00000009391	cmss1	100	51.890	Lepisosteus_oculatus
ENSPMEG00000021020	cmss1	69	63.000	ENSLAFG00000017509	CMSS1	89	63.366	Loxodonta_africana
ENSPMEG00000021020	cmss1	100	52.759	ENSMFAG00000045006	CMSS1	100	49.836	Macaca_fascicularis
ENSPMEG00000021020	cmss1	100	52.414	ENSMMUG00000002939	CMSS1	100	49.508	Macaca_mulatta
ENSPMEG00000021020	cmss1	100	52.759	ENSMNEG00000031315	CMSS1	100	49.836	Macaca_nemestrina
ENSPMEG00000021020	cmss1	100	52.759	ENSMLEG00000033660	CMSS1	100	49.836	Mandrillus_leucophaeus
ENSPMEG00000021020	cmss1	100	76.632	ENSMAMG00000017176	cmss1	100	77.320	Mastacembelus_armatus
ENSPMEG00000021020	cmss1	100	76.712	ENSMZEG00005021886	cmss1	100	78.082	Maylandia_zebra
ENSPMEG00000021020	cmss1	70	61.386	ENSMGAG00000014360	CMSS1	89	61.386	Meleagris_gallopavo
ENSPMEG00000021020	cmss1	100	37.370	ENSMAUG00000020609	Cmss1	100	36.082	Mesocricetus_auratus
ENSPMEG00000021020	cmss1	100	53.819	ENSMICG00000048977	CMSS1	100	50.842	Microcebus_murinus
ENSPMEG00000021020	cmss1	100	51.864	ENSMOCG00000021937	Cmss1	100	51.864	Microtus_ochrogaster
ENSPMEG00000021020	cmss1	70	78.818	ENSMMOG00000019794	cmss1	97	67.188	Mola_mola
ENSPMEG00000021020	cmss1	94	54.044	ENSMODG00000002275	CMSS1	76	63.861	Monodelphis_domestica
ENSPMEG00000021020	cmss1	100	76.190	ENSMALG00000004250	cmss1	100	74.403	Monopterus_albus
ENSPMEG00000021020	cmss1	100	53.401	MGP_CAROLIEiJ_G0020824	Cmss1	100	52.721	Mus_caroli
ENSPMEG00000021020	cmss1	100	53.061	ENSMUSG00000022748	Cmss1	100	52.381	Mus_musculus
ENSPMEG00000021020	cmss1	100	52.721	MGP_PahariEiJ_G0016524	Cmss1	100	52.041	Mus_pahari
ENSPMEG00000021020	cmss1	100	52.721	MGP_SPRETEiJ_G0021724	Cmss1	100	52.041	Mus_spretus
ENSPMEG00000021020	cmss1	69	62.312	ENSMPUG00000011324	CMSS1	78	62.687	Mustela_putorius_furo
ENSPMEG00000021020	cmss1	69	62.376	ENSMLUG00000001131	CMSS1	78	62.745	Myotis_lucifugus
ENSPMEG00000021020	cmss1	100	51.736	ENSNGAG00000020316	Cmss1	100	51.903	Nannospalax_galili
ENSPMEG00000021020	cmss1	100	76.712	ENSNBRG00000003095	cmss1	100	78.082	Neolamprologus_brichardi
ENSPMEG00000021020	cmss1	100	52.431	ENSNLEG00000034172	CMSS1	100	50.492	Nomascus_leucogenys
ENSPMEG00000021020	cmss1	70	53.465	ENSMEUG00000014505	CMSS1	89	53.465	Notamacropus_eugenii
ENSPMEG00000021020	cmss1	100	53.287	ENSOPRG00000002986	CMSS1	100	51.370	Ochotona_princeps
ENSPMEG00000021020	cmss1	100	47.569	ENSODEG00000001853	-	100	46.528	Octodon_degus
ENSPMEG00000021020	cmss1	100	54.167	ENSODEG00000005226	-	100	53.819	Octodon_degus
ENSPMEG00000021020	cmss1	100	46.875	ENSODEG00000009446	-	78	54.950	Octodon_degus
ENSPMEG00000021020	cmss1	100	51.736	ENSODEG00000003558	-	75	61.386	Octodon_degus
ENSPMEG00000021020	cmss1	91	80.460	ENSONIG00000006678	cmss1	99	80.843	Oreochromis_niloticus
ENSPMEG00000021020	cmss1	94	52.206	ENSOANG00000007529	CMSS1	87	60.891	Ornithorhynchus_anatinus
ENSPMEG00000021020	cmss1	86	57.028	ENSOCUG00000025366	CMSS1	73	62.871	Oryctolagus_cuniculus
ENSPMEG00000021020	cmss1	100	74.394	ENSORLG00000020340	cmss1	100	73.702	Oryzias_latipes
ENSPMEG00000021020	cmss1	74	74.178	ENSORLG00020012235	cmss1	90	74.178	Oryzias_latipes_hni
ENSPMEG00000021020	cmss1	92	63.941	ENSORLG00015015551	cmss1	76	73.892	Oryzias_latipes_hsok
ENSPMEG00000021020	cmss1	100	74.658	ENSOMEG00000012555	cmss1	100	75.342	Oryzias_melastigma
ENSPMEG00000021020	cmss1	70	63.861	ENSOGAG00000002045	CMSS1	89	63.861	Otolemur_garnettii
ENSPMEG00000021020	cmss1	70	63.054	ENSOARG00000017899	CMSS1	70	63.054	Ovis_aries
ENSPMEG00000021020	cmss1	70	62.871	ENSPPAG00000038515	CMSS1	74	62.871	Pan_paniscus
ENSPMEG00000021020	cmss1	100	53.979	ENSPPRG00000016767	CMSS1	100	53.633	Panthera_pardus
ENSPMEG00000021020	cmss1	100	53.633	ENSPTIG00000018274	CMSS1	100	53.633	Panthera_tigris_altaica
ENSPMEG00000021020	cmss1	100	53.103	ENSPTRG00000015157	CMSS1	100	50.164	Pan_troglodytes
ENSPMEG00000021020	cmss1	70	63.366	ENSPANG00000019980	CMSS1	80	63.366	Papio_anubis
ENSPMEG00000021020	cmss1	96	61.232	ENSPKIG00000012609	cmss1	96	62.357	Paramormyrops_kingsleyae
ENSPMEG00000021020	cmss1	70	62.871	ENSPSIG00000003849	CMSS1	88	62.871	Pelodiscus_sinensis
ENSPMEG00000021020	cmss1	70	75.490	ENSPMGG00000010286	cmss1	88	75.490	Periophthalmus_magnuspinnatus
ENSPMEG00000021020	cmss1	100	52.759	ENSPEMG00000016384	Cmss1	100	51.557	Peromyscus_maniculatus_bairdii
ENSPMEG00000021020	cmss1	71	50.490	ENSPMAG00000001146	cmss1	99	50.739	Petromyzon_marinus
ENSPMEG00000021020	cmss1	70	62.376	ENSPCIG00000015656	CMSS1	77	62.376	Phascolarctos_cinereus
ENSPMEG00000021020	cmss1	100	98.958	ENSPFOG00000016849	cmss1	100	98.958	Poecilia_formosa
ENSPMEG00000021020	cmss1	100	98.611	ENSPLAG00000008323	cmss1	100	98.611	Poecilia_latipinna
ENSPMEG00000021020	cmss1	95	96.000	ENSPREG00000007618	cmss1	89	96.169	Poecilia_reticulata
ENSPMEG00000021020	cmss1	100	53.125	ENSPPYG00000013606	CMSS1	100	50.820	Pongo_abelii
ENSPMEG00000021020	cmss1	100	54.514	ENSPCOG00000020035	CMSS1	100	50.505	Propithecus_coquereli
ENSPMEG00000021020	cmss1	100	45.833	ENSPVAG00000017031	CMSS1	100	45.675	Pteropus_vampyrus
ENSPMEG00000021020	cmss1	91	76.692	ENSPNYG00000013428	cmss1	97	78.195	Pundamilia_nyererei
ENSPMEG00000021020	cmss1	100	57.627	ENSPNAG00000007912	cmss1	100	56.757	Pygocentrus_nattereri
ENSPMEG00000021020	cmss1	70	62.871	ENSRNOG00000027888	Cmss1	79	62.871	Rattus_norvegicus
ENSPMEG00000021020	cmss1	100	53.103	ENSRBIG00000037931	CMSS1	100	52.249	Rhinopithecus_bieti
ENSPMEG00000021020	cmss1	100	53.103	ENSRROG00000042910	CMSS1	100	52.249	Rhinopithecus_roxellana
ENSPMEG00000021020	cmss1	83	58.750	ENSSBOG00000030980	CMSS1	77	62.871	Saimiri_boliviensis_boliviensis
ENSPMEG00000021020	cmss1	70	63.366	ENSSHAG00000009321	CMSS1	80	63.366	Sarcophilus_harrisii
ENSPMEG00000021020	cmss1	100	62.069	ENSSFOG00015001509	cmss1	100	59.596	Scleropages_formosus
ENSPMEG00000021020	cmss1	100	75.685	ENSSMAG00000001653	cmss1	100	76.712	Scophthalmus_maximus
ENSPMEG00000021020	cmss1	100	79.310	ENSSDUG00000007719	cmss1	100	80.690	Seriola_dumerili
ENSPMEG00000021020	cmss1	99	72.109	ENSSLDG00000012300	cmss1	95	76.190	Seriola_lalandi_dorsalis
ENSPMEG00000021020	cmss1	100	45.329	ENSSARG00000003584	CMSS1	100	44.097	Sorex_araneus
ENSPMEG00000021020	cmss1	70	61.386	ENSSPUG00000003865	CMSS1	89	61.386	Sphenodon_punctatus
ENSPMEG00000021020	cmss1	95	75.636	ENSSPAG00000019182	cmss1	78	73.864	Stegastes_partitus
ENSPMEG00000021020	cmss1	100	52.941	ENSSSCG00000011970	CMSS1	100	49.833	Sus_scrofa
ENSPMEG00000021020	cmss1	70	59.901	ENSTGUG00000013635	CMSS1	88	59.901	Taeniopygia_guttata
ENSPMEG00000021020	cmss1	100	66.552	ENSTRUG00000015265	cmss1	100	63.000	Takifugu_rubripes
ENSPMEG00000021020	cmss1	70	71.429	ENSTNIG00000002880	cmss1	83	68.122	Tetraodon_nigroviridis
ENSPMEG00000021020	cmss1	100	38.194	ENSTBEG00000016722	CMSS1	72	44.059	Tupaia_belangeri
ENSPMEG00000021020	cmss1	100	52.249	ENSTTRG00000001562	CMSS1	100	51.557	Tursiops_truncatus
ENSPMEG00000021020	cmss1	70	63.366	ENSUAMG00000024209	CMSS1	91	63.366	Ursus_americanus
ENSPMEG00000021020	cmss1	70	62.871	ENSUMAG00000001983	CMSS1	78	62.871	Ursus_maritimus
ENSPMEG00000021020	cmss1	56	61.250	ENSVPAG00000000263	CMSS1	57	61.250	Vicugna_pacos
ENSPMEG00000021020	cmss1	70	61.386	ENSVVUG00000007776	-	80	61.386	Vulpes_vulpes
ENSPMEG00000021020	cmss1	69	62.000	ENSVVUG00000021647	-	82	62.376	Vulpes_vulpes
ENSPMEG00000021020	cmss1	100	53.448	ENSXETG00000011858	cmss1	100	50.000	Xenopus_tropicalis
ENSPMEG00000021020	cmss1	95	88.000	ENSXCOG00000018724	cmss1	89	79.783	Xiphophorus_couchianus
ENSPMEG00000021020	cmss1	93	88.390	ENSXMAG00000011243	cmss1	98	79.783	Xiphophorus_maculatus