EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMEG00000021023 (Gene tree)
Gene ID: 106930494
Gene Symbol: safb
Alias: -
Full Name: scaffold attachment factor B2-like
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Plus strand
Length: 10994 bases
Position: chrKQ552225.1:172273-183266
Accession: 106930494
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000032860	RRM_1	PF00076.22	4.6e-11	1	1
ENSPMEP00000018117	RRM_1	PF00076.22	5.1e-11	1	1
ENSPMEP00000032860	SAP	PF02037.27	2.7e-09	1	1
ENSPMEP00000018117	SAP	PF02037.27	3e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000027157	-	4240	-	ENSPMEP00000032860	715 (aa)	-	-
ENSPMET00000034066	-	4129	XM_015008075	ENSPMEP00000018117	753 (aa)	XP_014863561	UPI00072DF248

Gene Model

Click here to download ENSPMEG00000021023's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000021023's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000021023	safb	98	41.455	ENSG00000160633	SAFB	76	61.719	Homo_sapiens
ENSPMEG00000021023	safb	100	68.817	ENSAPOG00000022508	safb	100	68.743	Acanthochromis_polyacanthus
ENSPMEG00000021023	safb	70	39.737	ENSAMEG00000012254	SAFB	95	38.958	Ailuropoda_melanoleuca
ENSPMEG00000021023	safb	100	67.291	ENSACIG00000006247	safb	100	69.048	Amphilophus_citrinellus
ENSPMEG00000021023	safb	100	68.125	ENSAOCG00000006308	safb	100	67.794	Amphiprion_ocellaris
ENSPMEG00000021023	safb	100	68.854	ENSAPEG00000023342	safb	100	68.780	Amphiprion_percula
ENSPMEG00000021023	safb	100	67.933	ENSATEG00000004998	safb	100	66.983	Anabas_testudineus
ENSPMEG00000021023	safb	68	42.970	ENSAPLG00000005780	-	69	48.609	Anas_platyrhynchos
ENSPMEG00000021023	safb	64	56.368	ENSACAG00000016893	-	68	53.275	Anolis_carolinensis
ENSPMEG00000021023	safb	98	41.466	ENSANAG00000028821	SAFB	94	38.983	Aotus_nancymaae
ENSPMEG00000021023	safb	100	70.537	ENSACLG00000001926	safb	100	70.787	Astatotilapia_calliptera
ENSPMEG00000021023	safb	99	54.332	ENSAMXG00000018154	safb	99	55.220	Astyanax_mexicanus
ENSPMEG00000021023	safb	98	41.705	ENSBTAG00000007875	SAFB	95	38.618	Bos_taurus
ENSPMEG00000021023	safb	82	48.911	ENSCJAG00000017081	SAFB	93	44.922	Callithrix_jacchus
ENSPMEG00000021023	safb	70	40.328	ENSCAFG00000018803	SAFB	81	39.209	Canis_familiaris
ENSPMEG00000021023	safb	70	40.262	ENSCAFG00020018943	SAFB	94	39.209	Canis_lupus_dingo
ENSPMEG00000021023	safb	98	41.724	ENSCHIG00000007262	SAFB	95	38.636	Capra_hircus
ENSPMEG00000021023	safb	57	43.293	ENSTSYG00000001851	-	91	42.041	Carlito_syrichta
ENSPMEG00000021023	safb	53	52.569	ENSCPOG00000026322	SAFB	73	45.399	Cavia_porcellus
ENSPMEG00000021023	safb	98	41.466	ENSCCAG00000020193	SAFB	94	39.346	Cebus_capucinus
ENSPMEG00000021023	safb	98	41.455	ENSCATG00000029994	SAFB	94	39.503	Cercocebus_atys
ENSPMEG00000021023	safb	53	52.174	ENSCLAG00000007734	SAFB	72	48.244	Chinchilla_lanigera
ENSPMEG00000021023	safb	98	40.945	ENSCSAG00000009949	SAFB	94	39.503	Chlorocebus_sabaeus
ENSPMEG00000021023	safb	90	40.724	ENSCPBG00000010936	-	69	50.647	Chrysemys_picta_bellii
ENSPMEG00000021023	safb	90	42.379	ENSCPBG00000010928	-	95	42.002	Chrysemys_picta_bellii
ENSPMEG00000021023	safb	98	40.788	ENSCANG00000019754	-	93	38.787	Colobus_angolensis_palliatus
ENSPMEG00000021023	safb	94	36.293	ENSCANG00000004774	-	61	61.194	Colobus_angolensis_palliatus
ENSPMEG00000021023	safb	99	64.781	ENSCSEG00000019870	safb	100	63.273	Cynoglossus_semilaevis
ENSPMEG00000021023	safb	100	84.412	ENSCVAG00000002226	safb	100	84.412	Cyprinodon_variegatus
ENSPMEG00000021023	safb	98	55.623	ENSDARG00000020467	safb	99	54.598	Danio_rerio
ENSPMEG00000021023	safb	98	40.837	ENSDNOG00000015746	SAFB	95	36.099	Dasypus_novemcinctus
ENSPMEG00000021023	safb	50	54.331	ENSDORG00000016200	Safb	72	44.848	Dipodomys_ordii
ENSPMEG00000021023	safb	56	53.668	ENSEASG00005023019	SAFB	97	38.654	Equus_asinus_asinus
ENSPMEG00000021023	safb	56	53.668	ENSECAG00000018659	SAFB	87	38.614	Equus_caballus
ENSPMEG00000021023	safb	99	58.343	ENSELUG00000022327	safb	99	57.541	Esox_lucius
ENSPMEG00000021023	safb	70	40.325	ENSFCAG00000011835	SAFB	94	39.096	Felis_catus
ENSPMEG00000021023	safb	100	87.402	ENSFHEG00000004219	safb	100	87.402	Fundulus_heteroclitus
ENSPMEG00000021023	safb	100	59.233	ENSGMOG00000014280	safb	100	60.167	Gadus_morhua
ENSPMEG00000021023	safb	100	39.955	ENSGALG00000013365	-	64	48.689	Gallus_gallus
ENSPMEG00000021023	safb	60	50.155	ENSGALG00000001948	-	83	49.002	Gallus_gallus
ENSPMEG00000021023	safb	100	93.086	ENSGAFG00000016162	safb	100	93.086	Gambusia_affinis
ENSPMEG00000021023	safb	100	63.329	ENSGACG00000011385	safb	100	63.958	Gasterosteus_aculeatus
ENSPMEG00000021023	safb	99	44.699	ENSGAGG00000008424	-	82	51.926	Gopherus_agassizii
ENSPMEG00000021023	safb	69	51.268	ENSGAGG00000017702	-	87	50.788	Gopherus_agassizii
ENSPMEG00000021023	safb	98	41.576	ENSGGOG00000015109	SAFB	94	39.501	Gorilla_gorilla
ENSPMEG00000021023	safb	100	66.834	ENSHBUG00000009218	safb	100	65.955	Haplochromis_burtoni
ENSPMEG00000021023	safb	78	52.033	ENSHGLG00100004228	SAFB	66	51.220	Heterocephalus_glaber_male
ENSPMEG00000021023	safb	93	61.227	ENSHCOG00000001705	safb	99	60.836	Hippocampus_comes
ENSPMEG00000021023	safb	99	57.057	ENSIPUG00000024869	safb2	99	57.363	Ictalurus_punctatus
ENSPMEG00000021023	safb	100	72.384	ENSKMAG00000022308	safb	100	72.871	Kryptolebias_marmoratus
ENSPMEG00000021023	safb	100	67.059	ENSLBEG00000006015	safb	100	66.941	Labrus_bergylta
ENSPMEG00000021023	safb	68	41.472	ENSLACG00000018090	SAFB	97	46.433	Latimeria_chalumnae
ENSPMEG00000021023	safb	98	54.936	ENSLOCG00000003613	safb	99	55.634	Lepisosteus_oculatus
ENSPMEG00000021023	safb	98	40.447	ENSLAFG00000003840	SAFB	95	39.391	Loxodonta_africana
ENSPMEG00000021023	safb	98	41.455	ENSMFAG00000003885	SAFB	94	39.616	Macaca_fascicularis
ENSPMEG00000021023	safb	98	41.455	ENSMMUG00000017970	SAFB	94	39.503	Macaca_mulatta
ENSPMEG00000021023	safb	98	40.048	ENSMNEG00000035637	SAFB	94	38.025	Macaca_nemestrina
ENSPMEG00000021023	safb	64	39.016	ENSMLEG00000038637	SAFB	94	36.954	Mandrillus_leucophaeus
ENSPMEG00000021023	safb	100	66.983	ENSMAMG00000003357	safb	91	65.796	Mastacembelus_armatus
ENSPMEG00000021023	safb	100	70.662	ENSMZEG00005009120	safb	100	70.911	Maylandia_zebra
ENSPMEG00000021023	safb	60	50.464	ENSMGAG00000001051	-	82	51.210	Meleagris_gallopavo
ENSPMEG00000021023	safb	68	42.970	ENSMGAG00000001101	-	79	42.800	Meleagris_gallopavo
ENSPMEG00000021023	safb	90	35.471	ENSMICG00000046795	-	70	59.420	Microcebus_murinus
ENSPMEG00000021023	safb	69	40.232	ENSMICG00000008739	-	94	39.278	Microcebus_murinus
ENSPMEG00000021023	safb	93	40.716	ENSMODG00000001236	SAFB	76	46.341	Monodelphis_domestica
ENSPMEG00000021023	safb	100	67.371	ENSMALG00000020330	safb	100	66.784	Monopterus_albus
ENSPMEG00000021023	safb	98	41.667	ENSMLUG00000001081	SAFB	94	39.121	Myotis_lucifugus
ENSPMEG00000021023	safb	98	41.677	ENSNLEG00000013551	SAFB	97	39.951	Nomascus_leucogenys
ENSPMEG00000021023	safb	51	52.869	ENSODEG00000014838	SAFB	72	44.512	Octodon_degus
ENSPMEG00000021023	safb	100	67.815	ENSONIG00000002318	safb	100	67.815	Oreochromis_niloticus
ENSPMEG00000021023	safb	88	36.712	ENSOCUG00000014628	SAFB	64	41.423	Oryctolagus_cuniculus
ENSPMEG00000021023	safb	99	67.363	ENSORLG00000016989	safb	100	67.319	Oryzias_latipes
ENSPMEG00000021023	safb	99	64.133	ENSORLG00020000404	safb	100	64.232	Oryzias_latipes_hni
ENSPMEG00000021023	safb	100	67.571	ENSORLG00015010733	safb	100	67.730	Oryzias_latipes_hsok
ENSPMEG00000021023	safb	100	68.382	ENSOMEG00000009066	safb	100	68.382	Oryzias_melastigma
ENSPMEG00000021023	safb	67	40.136	ENSOGAG00000027769	SAFB	92	40.068	Otolemur_garnettii
ENSPMEG00000021023	safb	85	36.986	ENSOARG00000007856	-	98	35.695	Ovis_aries
ENSPMEG00000021023	safb	98	38.303	ENSOARG00000007662	-	95	37.868	Ovis_aries
ENSPMEG00000021023	safb	98	41.576	ENSPPAG00000035129	SAFB	94	39.503	Pan_paniscus
ENSPMEG00000021023	safb	70	40.325	ENSPPRG00000017197	SAFB	94	39.096	Panthera_pardus
ENSPMEG00000021023	safb	98	41.576	ENSPTRG00000010335	SAFB	94	39.503	Pan_troglodytes
ENSPMEG00000021023	safb	98	41.162	ENSPANG00000007770	SAFB	94	39.548	Papio_anubis
ENSPMEG00000021023	safb	99	54.971	ENSPKIG00000009902	safb	99	55.835	Paramormyrops_kingsleyae
ENSPMEG00000021023	safb	99	43.207	ENSPSIG00000011679	-	97	43.337	Pelodiscus_sinensis
ENSPMEG00000021023	safb	99	43.630	ENSPSIG00000009367	-	94	43.352	Pelodiscus_sinensis
ENSPMEG00000021023	safb	100	99.602	ENSPFOG00000007745	safb	100	99.602	Poecilia_formosa
ENSPMEG00000021023	safb	100	95.057	ENSPLAG00000001614	safb	100	95.057	Poecilia_latipinna
ENSPMEG00000021023	safb	100	96.219	ENSPREG00000012496	safb	100	96.219	Poecilia_reticulata
ENSPMEG00000021023	safb	98	40.812	ENSPPYG00000009428	SAFB	94	39.253	Pongo_abelii
ENSPMEG00000021023	safb	67	36.424	ENSPCAG00000006475	SAFB	65	46.012	Procavia_capensis
ENSPMEG00000021023	safb	98	37.825	ENSPCOG00000014090	SAFB	93	36.342	Propithecus_coquereli
ENSPMEG00000021023	safb	76	51.754	ENSPVAG00000004913	SAFB	69	50.877	Pteropus_vampyrus
ENSPMEG00000021023	safb	99	55.683	ENSPNAG00000021838	safb	99	57.565	Pygocentrus_nattereri
ENSPMEG00000021023	safb	94	40.576	ENSRBIG00000042509	SAFB	61	61.194	Rhinopithecus_bieti
ENSPMEG00000021023	safb	98	41.333	ENSRROG00000029278	SAFB	94	39.503	Rhinopithecus_roxellana
ENSPMEG00000021023	safb	98	41.466	ENSSBOG00000026291	SAFB	94	39.346	Saimiri_boliviensis_boliviensis
ENSPMEG00000021023	safb	99	56.422	ENSSFOG00015008156	safb	99	56.831	Scleropages_formosus
ENSPMEG00000021023	safb	100	66.943	ENSSMAG00000009316	safb	100	68.009	Scophthalmus_maximus
ENSPMEG00000021023	safb	100	68.507	ENSSDUG00000009652	safb	100	69.762	Seriola_dumerili
ENSPMEG00000021023	safb	100	67.943	ENSSLDG00000001670	safb	100	67.464	Seriola_lalandi_dorsalis
ENSPMEG00000021023	safb	72	39.293	ENSSPUG00000009747	-	95	42.857	Sphenodon_punctatus
ENSPMEG00000021023	safb	98	66.835	ENSSPAG00000015682	safb	99	66.625	Stegastes_partitus
ENSPMEG00000021023	safb	67	39.833	ENSSSCG00000013522	SAFB	94	39.844	Sus_scrofa
ENSPMEG00000021023	safb	79	51.145	ENSTGUG00000000502	-	79	50.382	Taeniopygia_guttata
ENSPMEG00000021023	safb	100	68.682	ENSTRUG00000003567	safb	100	67.110	Takifugu_rubripes
ENSPMEG00000021023	safb	95	57.750	ENSTNIG00000015470	safb	100	57.572	Tetraodon_nigroviridis
ENSPMEG00000021023	safb	90	72.222	ENSTTRG00000013588	SAFB	62	72.222	Tursiops_truncatus
ENSPMEG00000021023	safb	59	53.629	ENSUMAG00000009734	SAFB	55	62.121	Ursus_maritimus
ENSPMEG00000021023	safb	51	50.570	ENSVPAG00000012043	SAFB	61	46.765	Vicugna_pacos
ENSPMEG00000021023	safb	70	40.492	ENSVVUG00000013720	SAFB	81	39.346	Vulpes_vulpes
ENSPMEG00000021023	safb	68	40.375	ENSXETG00000008755	safb	73	60.256	Xenopus_tropicalis
ENSPMEG00000021023	safb	100	97.078	ENSXMAG00000003458	safb	100	97.078	Xiphophorus_maculatus