EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMEG00000021030 (Gene tree)
Gene ID: 106919204
Gene Symbol: -
Alias: -
Full Name: zinc finger protein 420-like
Gene Type: protein_coding
Species: Poecilia_mexicana
Status: putative
Strand: Plus strand
Length: 15837 bases
Position: chrKQ551330.1:276622-292458
Accession: 106919204
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMEP00000032870	zf-C2H2	PF00096.26	2.1e-45	1	6
ENSPMEP00000032870	zf-C2H2	PF00096.26	2.1e-45	2	6
ENSPMEP00000032870	zf-C2H2	PF00096.26	2.1e-45	3	6
ENSPMEP00000032870	zf-C2H2	PF00096.26	2.1e-45	4	6
ENSPMEP00000032870	zf-C2H2	PF00096.26	2.1e-45	5	6
ENSPMEP00000032870	zf-C2H2	PF00096.26	2.1e-45	6	6
ENSPMEP00000032870	zf-met	PF12874.7	9.4e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMET00000027180	-	5503	XM_014989414	ENSPMEP00000032870	1274 (aa)	XP_014844900	UPI00072DE8B6

Gene Model

Click here to download ENSPMEG00000021030's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMEG00000021030's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMEG00000021030	-	50	42.135	ENSPMEG00000007589	-	80	42.135
ENSPMEG00000021030	-	52	45.455	ENSPMEG00000016478	-	90	45.455
ENSPMEG00000021030	-	51	44.186	ENSPMEG00000014783	-	51	44.186
ENSPMEG00000021030	-	53	37.879	ENSPMEG00000022727	-	96	41.765
ENSPMEG00000021030	-	52	31.068	ENSPMEG00000020849	-	63	31.068
ENSPMEG00000021030	-	54	41.463	ENSPMEG00000010618	-	86	34.296
ENSPMEG00000021030	-	50	31.818	ENSPMEG00000017910	-	87	41.420
ENSPMEG00000021030	-	56	32.394	ENSPMEG00000016458	-	93	38.462
ENSPMEG00000021030	-	50	43.165	ENSPMEG00000014688	-	77	38.554
ENSPMEG00000021030	-	52	31.221	ENSPMEG00000014980	-	74	31.221

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMEG00000021030	-	52	35.556	ENSAOCG00000003277	-	79	49.091	Amphiprion_ocellaris
ENSPMEG00000021030	-	53	36.444	ENSACLG00000015989	-	90	34.361	Astatotilapia_calliptera
ENSPMEG00000021030	-	51	40.361	ENSCSEG00000001771	-	63	40.361	Cynoglossus_semilaevis
ENSPMEG00000021030	-	53	36.000	ENSHBUG00000016546	-	80	36.000	Haplochromis_burtoni
ENSPMEG00000021030	-	53	36.444	ENSMZEG00005027844	-	80	36.444	Maylandia_zebra
ENSPMEG00000021030	-	100	98.980	ENSPFOG00000007708	-	100	98.980	Poecilia_formosa
ENSPMEG00000021030	-	100	98.587	ENSPLAG00000005897	-	100	98.587	Poecilia_latipinna
ENSPMEG00000021030	-	53	36.444	ENSPNYG00000005671	-	89	36.444	Pundamilia_nyererei
ENSPMEG00000021030	-	52	32.864	ENSSDUG00000005401	-	88	32.627	Seriola_dumerili